RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 DOCK5Q9H7D0 1870 aa18.83■□□□□ 0.6
CCND1-205ENST00000542367 CCDC196A0A1B0GTZ2 297 aa18.82■□□□□ 0.6
CCND1-205ENST00000542367 H3BRB1 525 aa18.82■□□□□ 0.6
CCND1-205ENST00000542367 STXBP3O00186 592 aa18.82■□□□□ 0.6
CCND1-205ENST00000542367 ATP9AO75110 1047 aa18.82■□□□□ 0.6
CCND1-205ENST00000542367 ITGB5P18084 799 aa18.82■□□□□ 0.6
CCND1-205ENST00000542367 HIC1Q14526 733 aa18.82■□□□□ 0.6
CCND1-205ENST00000542367 MYLIPQ8WY64 445 aa18.82■□□□□ 0.6
CCND1-205ENST00000542367 GPRASP2Q96D09 838 aa18.82■□□□□ 0.6
CCND1-205ENST00000542367 FTOQ9C0B1 505 aaKnown RBP eCLIP18.82■□□□□ 0.6
CCND1-205ENST00000542367 ZNF576Q9H609 170 aa18.82■□□□□ 0.6
CCND1-205ENST00000542367 TUT1Q9H6E5 874 aaKnown RBP18.82■□□□□ 0.6
CCND1-205ENST00000542367 BARHL2Q9NY43 387 aa18.82■□□□□ 0.6
CCND1-205ENST00000542367 UBIAD1Q9Y5Z9 338 aa18.82■□□□□ 0.6
CCND1-205ENST00000542367 SMCO2A6NFE2 343 aa18.81■□□□□ 0.6
CCND1-205ENST00000542367 EPB41L2O43491 1005 aaKnown RBP18.81■□□□□ 0.6
CCND1-205ENST00000542367 CKBP12277 381 aa18.81■□□□□ 0.6
CCND1-205ENST00000542367 ACTN1P12814 892 aa18.81■□□□□ 0.6
CCND1-205ENST00000542367 SELPP16109 830 aa18.81■□□□□ 0.6
CCND1-205ENST00000542367 SP4Q02446 784 aa18.81■□□□□ 0.6
CCND1-205ENST00000542367 PTK7Q13308 1070 aa18.81■□□□□ 0.6
CCND1-205ENST00000542367 GRIN2CQ14957 1233 aa18.81■□□□□ 0.6
CCND1-205ENST00000542367 PPP1R18Q6NYC8 613 aa18.81■□□□□ 0.6
CCND1-205ENST00000542367 FBXL16Q8N461 479 aa18.81■□□□□ 0.6
CCND1-205ENST00000542367 GIMAP8Q8ND71 665 aaPredicted RBP18.81■□□□□ 0.6
CCND1-205ENST00000542367 CDHR1Q96JP9 859 aa18.81■□□□□ 0.6
CCND1-205ENST00000542367 AGXT2Q9BYV1 514 aa18.81■□□□□ 0.6
CCND1-205ENST00000542367 EHMT1Q9H9B1 1298 aa18.81■□□□□ 0.6
CCND1-205ENST00000542367 JADE2Q9NQC1 790 aa18.81■□□□□ 0.6
CCND1-205ENST00000542367 MSRAQ9UJ68 235 aa18.81■□□□□ 0.6
CCND1-205ENST00000542367 hCG_1984214I3L0E3 225 aa18.8■□□□□ 0.6
CCND1-205ENST00000542367 KCNA2P16389 499 aa18.8■□□□□ 0.6
CCND1-205ENST00000542367 ADCY7P51828 1080 aa18.8■□□□□ 0.6
CCND1-205ENST00000542367 RBL2Q08999 1139 aa18.8■□□□□ 0.6
CCND1-205ENST00000542367 MTMR1Q13613 665 aa18.8■□□□□ 0.6
CCND1-205ENST00000542367 RAB30Q15771 203 aa18.8■□□□□ 0.6
CCND1-205ENST00000542367 UTP14CQ5TAP6 766 aaKnown RBP18.8■□□□□ 0.6
CCND1-205ENST00000542367 LRRC8DQ7L1W4 858 aa18.8■□□□□ 0.6
CCND1-205ENST00000542367 ZNF713Q8N859 430 aaPredicted RBP18.8■□□□□ 0.6
CCND1-205ENST00000542367 PGBD1Q96JS3 809 aa18.8■□□□□ 0.6
CCND1-205ENST00000542367 C17orf102A2RUQ5 167 aa18.79■□□□□ 0.6
CCND1-205ENST00000542367 MAFGO15525 162 aa18.79■□□□□ 0.6
CCND1-205ENST00000542367 FOSP01100 380 aaPredicted RBP18.79■□□□□ 0.6
CCND1-205ENST00000542367 SMIM10L2AP0DMW4 78 aa18.79■□□□□ 0.6
CCND1-205ENST00000542367 SMIM10L2BP0DMW5 78 aa18.79■□□□□ 0.6
CCND1-205ENST00000542367 RABGGTBP53611 331 aa18.79■□□□□ 0.6
CCND1-205ENST00000542367 GPNMBQ14956 572 aa18.79■□□□□ 0.6
CCND1-205ENST00000542367 PFKFB3Q16875 520 aaPredicted RBP18.79■□□□□ 0.6
CCND1-205ENST00000542367 ERICH6BQ5W0A0 696 aa18.79■□□□□ 0.6
CCND1-205ENST00000542367 RUFY3Q7L099 469 aa18.79■□□□□ 0.6
CCND1-205ENST00000542367 TEX2Q8IWB9 1127 aa18.79■□□□□ 0.6
CCND1-205ENST00000542367 WNT8BQ93098 351 aa18.79■□□□□ 0.6
CCND1-205ENST00000542367 RNPEPQ9H4A4 650 aa18.79■□□□□ 0.6
CCND1-205ENST00000542367 PKD2L1Q9P0L9 805 aa18.79■□□□□ 0.6
CCND1-205ENST00000542367 TANC1Q9C0D5 1861 aa18.79■□□□□ 0.6
CCND1-205ENST00000542367 TET1Q8NFU7 2136 aa18.79■□□□□ 0.6
CCND1-205ENST00000542367 EYSQ5T1H1 3165 aa18.79■□□□□ 0.6
CCND1-205ENST00000542367 SCG2P13521 617 aa18.78■□□□□ 0.6
CCND1-205ENST00000542367 ATP2A2P16615 1042 aaKnown RBP18.78■□□□□ 0.6
CCND1-205ENST00000542367 TRIM71Q2Q1W2 868 aaKnown RBP18.78■□□□□ 0.6
CCND1-205ENST00000542367 ZNF618Q5T7W0 954 aa18.78■□□□□ 0.6
CCND1-205ENST00000542367 TRIM50Q86XT4 487 aa18.78■□□□□ 0.6
CCND1-205ENST00000542367 ATP6V0A1Q93050 837 aa18.78■□□□□ 0.6
CCND1-205ENST00000542367 MXRA8Q9BRK3 442 aa18.78■□□□□ 0.6
CCND1-205ENST00000542367 GLT8D2Q9H1C3 349 aa18.78■□□□□ 0.6
CCND1-205ENST00000542367 NKX2-4Q9H2Z4 354 aa18.78■□□□□ 0.6
CCND1-205ENST00000542367 ZSWIM6Q9HCJ5 1215 aa18.78■□□□□ 0.6
CCND1-205ENST00000542367 TMEM260Q9NX78 707 aa18.78■□□□□ 0.6
CCND1-205ENST00000542367 ZNF215Q9UL58 517 aaPredicted RBP18.78■□□□□ 0.6
CCND1-205ENST00000542367 YBX2Q9Y2T7 364 aaKnown RBP18.78■□□□□ 0.6
CCND1-205ENST00000542367 TREHO43280 583 aa18.77■□□□□ 0.6
CCND1-205ENST00000542367 PRPF3O43395 683 aaKnown RBP18.77■□□□□ 0.6
CCND1-205ENST00000542367 PARNO95453 639 aaKnown RBP18.77■□□□□ 0.6
CCND1-205ENST00000542367 FOSL2P15408 326 aa18.77■□□□□ 0.6
CCND1-205ENST00000542367 HOXC8P31273 242 aa18.77■□□□□ 0.6
CCND1-205ENST00000542367 TCF7P36402 384 aaPredicted RBP18.77■□□□□ 0.6
CCND1-205ENST00000542367 CLK2P49760 499 aaKnown RBP18.77■□□□□ 0.6
CCND1-205ENST00000542367 SERINC5Q86VE9 423 aa18.77■□□□□ 0.6
CCND1-205ENST00000542367 CYP2W1Q8TAV3 490 aa18.77■□□□□ 0.6
CCND1-205ENST00000542367 SEPT1Q8WYJ6 367 aa18.77■□□□□ 0.6
CCND1-205ENST00000542367 ANO3Q9BYT9 981 aa18.77■□□□□ 0.6
CCND1-205ENST00000542367 SLC28A3Q9HAS3 691 aa18.77■□□□□ 0.6
CCND1-205ENST00000542367 CYP46A1Q9Y6A2 500 aa18.77■□□□□ 0.6
CCND1-205ENST00000542367 NID2Q14112 1375 aa18.77■□□□□ 0.6
CCND1-205ENST00000542367 GBF1Q92538 1859 aa18.77■□□□□ 0.6
CCND1-205ENST00000542367 GSTTP1A0A1W2PQM5 241 aa18.76■□□□□ 0.59
CCND1-205ENST00000542367 NBNO60934 754 aa18.76■□□□□ 0.59
CCND1-205ENST00000542367 MYOGP15173 224 aa18.76■□□□□ 0.59
CCND1-205ENST00000542367 PDIA3P30101 505 aaKnown RBP18.76■□□□□ 0.59
CCND1-205ENST00000542367 THPOP40225 353 aa18.76■□□□□ 0.59
CCND1-205ENST00000542367 EVCP57679 992 aa18.76■□□□□ 0.59
CCND1-205ENST00000542367 CCT2P78371 535 aaKnown RBP18.76■□□□□ 0.59
CCND1-205ENST00000542367 AP3B2Q13367 1082 aa18.76■□□□□ 0.59
CCND1-205ENST00000542367 NTRK3Q16288 839 aa18.76■□□□□ 0.59
CCND1-205ENST00000542367 PKN1Q16512 942 aa18.76■□□□□ 0.59
CCND1-205ENST00000542367 TRAF7Q6Q0C0 670 aa18.76■□□□□ 0.59
CCND1-205ENST00000542367 PHKBQ93100 1093 aa18.76■□□□□ 0.59
CCND1-205ENST00000542367 KCNH7Q9NS40 1196 aa18.76■□□□□ 0.59
CCND1-205ENST00000542367 SETD4Q9NVD3 440 aa18.76■□□□□ 0.59
CCND1-205ENST00000542367 PCDHA11Q9Y5I1 949 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms