RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 CTCFLQ8NI51 663 aaPredicted RBP22.94■■□□□ 1.26
DDX11-220ENST00000542244 RRP36Q96EU6 259 aaKnown RBP22.94■■□□□ 1.26
DDX11-220ENST00000542244 MAP3K14Q99558 947 aa22.94■■□□□ 1.26
DDX11-220ENST00000542244 GPR20Q99678 358 aa22.94■■□□□ 1.26
DDX11-220ENST00000542244 RNPEPQ9H4A4 650 aa22.94■■□□□ 1.26
DDX11-220ENST00000542244 TUT1Q9H6E5 874 aaKnown RBP22.94■■□□□ 1.26
DDX11-220ENST00000542244 ATP9AO75110 1047 aa22.93■■□□□ 1.26
DDX11-220ENST00000542244 THPOP40225 353 aa22.93■■□□□ 1.26
DDX11-220ENST00000542244 GRB10Q13322 594 aa22.93■■□□□ 1.26
DDX11-220ENST00000542244 UBE2SQ16763 222 aa22.93■■□□□ 1.26
DDX11-220ENST00000542244 CASC1Q6TDU7 716 aa22.93■■□□□ 1.26
DDX11-220ENST00000542244 NFXL1Q6ZNB6 911 aa22.93■■□□□ 1.26
DDX11-220ENST00000542244 ATXN2LQ8WWM7 1075 aaKnown RBP22.93■■□□□ 1.26
DDX11-220ENST00000542244 TCEANC2Q96MN5 208 aa22.93■■□□□ 1.26
DDX11-220ENST00000542244 NECAB3Q96P71 396 aaPredicted RBP22.93■■□□□ 1.26
DDX11-220ENST00000542244 SETD4Q9NVD3 440 aa22.93■■□□□ 1.26
DDX11-220ENST00000542244 PRRC2BQ5JSZ5 2229 aaKnown RBP22.92■■□□□ 1.26
DDX11-220ENST00000542244 MCM5P33992 734 aa22.92■■□□□ 1.26
DDX11-220ENST00000542244 KCNJ6P48051 423 aa22.92■■□□□ 1.26
DDX11-220ENST00000542244 MKRN4PQ13434 485 aaPredicted RBP22.92■■□□□ 1.26
DDX11-220ENST00000542244 UTP14CQ5TAP6 766 aaKnown RBP22.92■■□□□ 1.26
DDX11-220ENST00000542244 SMARCC2Q8TAQ2 1214 aa22.92■■□□□ 1.26
DDX11-220ENST00000542244 TRANK1O15050 2925 aa22.92■■□□□ 1.26
DDX11-220ENST00000542244 C17orf102A2RUQ5 167 aa22.91■■□□□ 1.26
DDX11-220ENST00000542244 TRAF1Q13077 416 aa22.91■■□□□ 1.26
DDX11-220ENST00000542244 PCNX4Q63HM2 1172 aa22.91■■□□□ 1.26
DDX11-220ENST00000542244 METTL7BQ6UX53 244 aa22.91■■□□□ 1.26
DDX11-220ENST00000542244 DBF4BQ8NFT6 615 aa22.91■■□□□ 1.26
DDX11-220ENST00000542244 SYMPKQ92797 1274 aaKnown RBP22.91■■□□□ 1.26
DDX11-220ENST00000542244 ATP6V0A1Q93050 837 aa22.91■■□□□ 1.26
DDX11-220ENST00000542244 ANO2Q9NQ90 1003 aa22.91■■□□□ 1.26
DDX11-220ENST00000542244 COL4A4P53420 1690 aaPredicted RBP22.9■■□□□ 1.26
DDX11-220ENST00000542244 MUC3AQ02505 3323 aa22.9■■□□□ 1.26
DDX11-220ENST00000542244 CCDC69A6NI79 296 aa22.9■■□□□ 1.26
DDX11-220ENST00000542244 PIK3CDO00329 1044 aa22.9■■□□□ 1.26
DDX11-220ENST00000542244 FIBPO43427 364 aa22.9■■□□□ 1.26
DDX11-220ENST00000542244 LGR5O75473 907 aa22.9■■□□□ 1.26
DDX11-220ENST00000542244 CTSHP09668 335 aa22.9■■□□□ 1.26
DDX11-220ENST00000542244 ITGB5P18084 799 aa22.9■■□□□ 1.26
DDX11-220ENST00000542244 POU3F3P20264 500 aaPredicted RBP22.9■■□□□ 1.26
DDX11-220ENST00000542244 KIF5BP33176 963 aa22.9■■□□□ 1.26
DDX11-220ENST00000542244 KCNQ1P51787 676 aa22.9■■□□□ 1.26
DDX11-220ENST00000542244 MRPS5P82675 430 aaKnown RBP22.9■■□□□ 1.26
DDX11-220ENST00000542244 GDPD5Q8WTR4 605 aa22.9■■□□□ 1.26
DDX11-220ENST00000542244 TMEM87BQ96K49 555 aa22.9■■□□□ 1.26
DDX11-220ENST00000542244 PKD2L1Q9P0L9 805 aa22.9■■□□□ 1.26
DDX11-220ENST00000542244 MTUS1Q9ULD2 1270 aa22.9■■□□□ 1.26
DDX11-220ENST00000542244 XIRP2A4UGR9 3374 aa22.9■■□□□ 1.26
DDX11-220ENST00000542244 RSPH10B2B2RC85 870 aa22.89■■□□□ 1.25
DDX11-220ENST00000542244 NOP56O00567 594 aaKnown RBP22.89■■□□□ 1.25
DDX11-220ENST00000542244 GJB5O95377 273 aa22.89■■□□□ 1.25
DDX11-220ENST00000542244 RSPH10BP0C881 870 aa22.89■■□□□ 1.25
DDX11-220ENST00000542244 SMARCA1P28370 1054 aa22.89■■□□□ 1.25
DDX11-220ENST00000542244 LIFRP42702 1097 aa22.89■■□□□ 1.25
DDX11-220ENST00000542244 GNPTABQ3T906 1256 aa22.89■■□□□ 1.25
DDX11-220ENST00000542244 TYW1BQ6NUM6 668 aa22.89■■□□□ 1.25
DDX11-220ENST00000542244 TMTC3Q6ZXV5 915 aa22.89■■□□□ 1.25
DDX11-220ENST00000542244 RASEFQ8IZ41 740 aa22.89■■□□□ 1.25
DDX11-220ENST00000542244 ADAMTS19Q8TE59 1207 aa22.89■■□□□ 1.25
DDX11-220ENST00000542244 ZBED2Q9BTP6 218 aa22.89■■□□□ 1.25
DDX11-220ENST00000542244 BRPF3Q9ULD4 1205 aa22.89■■□□□ 1.25
DDX11-220ENST00000542244 ABHD14A-ACY1A0A1B0GW23 586 aa22.88■■□□□ 1.25
DDX11-220ENST00000542244 KIF28PB7ZC32 967 aa22.88■■□□□ 1.25
DDX11-220ENST00000542244 KCNA2P16389 499 aa22.88■■□□□ 1.25
DDX11-220ENST00000542244 ADAM17P78536 824 aa22.88■■□□□ 1.25
DDX11-220ENST00000542244 NEDD9Q14511 834 aa22.88■■□□□ 1.25
DDX11-220ENST00000542244 ADCK5Q3MIX3 580 aa22.88■■□□□ 1.25
DDX11-220ENST00000542244 MICU3Q86XE3 530 aa22.88■■□□□ 1.25
DDX11-220ENST00000542244 FANCBQ8NB91 859 aa22.88■■□□□ 1.25
DDX11-220ENST00000542244 ZBTB10Q96DT7 871 aa22.88■■□□□ 1.25
DDX11-220ENST00000542244 MTA3Q9BTC8 594 aa22.88■■□□□ 1.25
DDX11-220ENST00000542244 PSTPIP2Q9H939 334 aa22.88■■□□□ 1.25
DDX11-220ENST00000542244 SEC63Q9UGP8 760 aaKnown RBP22.88■■□□□ 1.25
DDX11-220ENST00000542244 GSTTP1A0A1W2PQM5 241 aa22.87■■□□□ 1.25
DDX11-220ENST00000542244 LINC01553A4QN01 128 aa22.87■■□□□ 1.25
DDX11-220ENST00000542244 TNFRSF10AO00220 468 aa22.87■■□□□ 1.25
DDX11-220ENST00000542244 STAM2O75886 525 aa22.87■■□□□ 1.25
DDX11-220ENST00000542244 BMP1P13497 986 aa22.87■■□□□ 1.25
DDX11-220ENST00000542244 IKBKEQ14164 716 aa22.87■■□□□ 1.25
DDX11-220ENST00000542244 SKIV2LQ15477 1246 aaKnown RBP22.87■■□□□ 1.25
DDX11-220ENST00000542244 RUFY4Q6ZNE9 571 aa22.87■■□□□ 1.25
DDX11-220ENST00000542244 CUL5Q93034 780 aa22.87■■□□□ 1.25
DDX11-220ENST00000542244 PGBD1Q96JS3 809 aa22.87■■□□□ 1.25
DDX11-220ENST00000542244 LZTS2Q9BRK4 669 aa22.87■■□□□ 1.25
DDX11-220ENST00000542244 USP26Q9BXU7 913 aa22.87■■□□□ 1.25
DDX11-220ENST00000542244 SLC12A7Q9Y666 1083 aa22.87■■□□□ 1.25
DDX11-220ENST00000542244 PARNO95453 639 aaKnown RBP22.86■■□□□ 1.25
DDX11-220ENST00000542244 GNAQP50148 359 aa22.86■■□□□ 1.25
DDX11-220ENST00000542244 PLEKHG4Q58EX7 1191 aa22.86■■□□□ 1.25
DDX11-220ENST00000542244 LMBR1Q8WVP7 490 aa22.86■■□□□ 1.25
DDX11-220ENST00000542244 RAD9AQ99638 391 aa22.86■■□□□ 1.25
DDX11-220ENST00000542244 SUGCTQ9HAC7 445 aa22.86■■□□□ 1.25
DDX11-220ENST00000542244 UBIAD1Q9Y5Z9 338 aa22.86■■□□□ 1.25
DDX11-220ENST00000542244 EXOSC10Q01780 885 aaKnown RBP22.85■■□□□ 1.25
DDX11-220ENST00000542244 FUT2Q10981 343 aa22.85■■□□□ 1.25
DDX11-220ENST00000542244 WWC2Q6AWC2 1192 aa22.85■■□□□ 1.25
DDX11-220ENST00000542244 HEATR3Q7Z4Q2 680 aa22.85■■□□□ 1.25
DDX11-220ENST00000542244 SGMS1Q86VZ5 419 aa22.85■■□□□ 1.25
DDX11-220ENST00000542244 TMTC2Q8N394 836 aa22.85■■□□□ 1.25
DDX11-220ENST00000542244 CYP2W1Q8TAV3 490 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms