RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 CRACR2BQ8N4Y2 399 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-220ENST00000541963 THAP3Q8WTV1 239 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-220ENST00000541963 C7orf69Q9H7B7 122 aa6.82□□□□□ -1.32
CPSF7-220ENST00000541963 HYPKQ9NX55 129 aa6.82□□□□□ -1.32
CPSF7-220ENST00000541963 PCDHB12Q9Y5F1 795 aa6.82□□□□□ -1.32
CPSF7-220ENST00000541963 IL16Q14005 1332 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 C9IYK1 514 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 GSC2O15499 205 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 CBX7O95931 251 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 EPHX1P07099 455 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 ITGA4P13612 1032 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 HSD3B2P26439 372 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 ALDH1B1P30837 517 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 KIR3DL1P43629 444 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 KCNMA1Q12791 1236 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 MRM1Q6IN84 353 aaKnown RBP6.81□□□□□ -1.32
CPSF7-220ENST00000541963 STYK1Q6J9G0 422 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 ZAR1Q86SH2 424 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 PPFIBP1Q86W92 1011 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 HOMER1Q86YM7 354 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 FBXL6Q8N531 539 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 SH3TC2Q8TF17 1288 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 MASTLQ96GX5 879 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 SGSM3Q96HU1 749 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 SPATA9Q9BWV2 254 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 WHRNQ9P202 907 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 ZMYM5Q9UJ78 669 aa6.81□□□□□ -1.32
CPSF7-220ENST00000541963 N4BP2Q86UW6 1770 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-220ENST00000541963 AFDNP55196 1824 aaKnown RBP6.8□□□□□ -1.32
CPSF7-220ENST00000541963 CCER2I3L3R5 266 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 ELL2O00472 640 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-220ENST00000541963 LEFTY1O75610 366 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 GDF11O95390 407 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 DDX58O95786 925 aaKnown RBP6.8□□□□□ -1.32
CPSF7-220ENST00000541963 EOMESO95936 686 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 NPR1P16066 1061 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 NCLP19338 710 aaKnown RBP6.8□□□□□ -1.32
CPSF7-220ENST00000541963 TCIRG1Q13488 830 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 KRT24Q2M2I5 525 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 NBPF9Q3BBW0 867 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 SLC10A6Q3KNW5 377 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 ZC3H12BQ5HYM0 836 aaKnown RBP6.8□□□□□ -1.32
CPSF7-220ENST00000541963 DCAF15Q66K64 600 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 RNF43Q68DV7 783 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 POMZP3Q6PJE2 187 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 PRR23CQ6ZRP0 262 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 SPATC1Q76KD6 591 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 ZNF34Q8IZ26 560 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 LILRB2Q8N423 598 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 TMEM151AQ8N4L1 468 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 LRRN4CLQ8ND94 238 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 PLBD2Q8NHP8 589 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 APPBP2Q92624 585 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 RNPC3Q96LT9 517 aaKnown RBP6.8□□□□□ -1.32
CPSF7-220ENST00000541963 UTP14AQ9BVJ6 771 aaKnown RBP6.8□□□□□ -1.32
CPSF7-220ENST00000541963 STK31Q9BXU1 1019 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 TMX4Q9H1E5 349 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-220ENST00000541963 SLKQ9H2G2 1235 aaPredicted RBP6.8□□□□□ -1.32
CPSF7-220ENST00000541963 MYH16Q9H6N6 1097 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 CHPF2Q9P2E5 772 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 NRXN2Q9P2S2 1712 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 SCN7AQ01118 1682 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 BCORQ6W2J9 1755 aa6.8□□□□□ -1.32
CPSF7-220ENST00000541963 RNF123Q5XPI4 1314 aa6.79□□□□□ -1.32
CPSF7-220ENST00000541963 ATP10DQ9P241 1426 aa6.79□□□□□ -1.32
CPSF7-220ENST00000541963 FAM155AB1AL88 458 aaPredicted RBP6.79□□□□□ -1.32
CPSF7-220ENST00000541963 IGF2BP3O00425 579 aaKnown RBP eCLIP6.79□□□□□ -1.32
CPSF7-220ENST00000541963 CDC45O75419 566 aa6.79□□□□□ -1.32
CPSF7-220ENST00000541963 ANXA1P04083 346 aa6.79□□□□□ -1.32
CPSF7-220ENST00000541963 SRGNP10124 158 aa6.79□□□□□ -1.32
CPSF7-220ENST00000541963 HSP90B1P14625 803 aaKnown RBP6.79□□□□□ -1.32
CPSF7-220ENST00000541963 CD247P20963 164 aa6.79□□□□□ -1.32
CPSF7-220ENST00000541963 GPTP24298 496 aa6.79□□□□□ -1.32
CPSF7-220ENST00000541963 HSP90AA2PQ14568 343 aaPredicted RBP6.79□□□□□ -1.32
CPSF7-220ENST00000541963 CLEC16AQ2KHT3 1053 aa6.79□□□□□ -1.32
CPSF7-220ENST00000541963 PROSER3Q2NL68 480 aa6.79□□□□□ -1.32
CPSF7-220ENST00000541963 SUSD4Q5VX71 490 aa6.79□□□□□ -1.32
CPSF7-220ENST00000541963 C8orf58Q8NAV2 365 aa6.79□□□□□ -1.32
CPSF7-220ENST00000541963 ZSWIM2Q8NEG5 633 aa6.79□□□□□ -1.32
CPSF7-220ENST00000541963 RPGRQ92834 1020 aaKnown RBP6.79□□□□□ -1.32
CPSF7-220ENST00000541963 RBM17Q96I25 401 aaKnown RBP6.79□□□□□ -1.32
CPSF7-220ENST00000541963 FGD4Q96M96 766 aa6.79□□□□□ -1.32
CPSF7-220ENST00000541963 MFSD14AQ96MC6 490 aa6.79□□□□□ -1.32
CPSF7-220ENST00000541963 METTL22Q9BUU2 404 aaPredicted RBP6.79□□□□□ -1.32
CPSF7-220ENST00000541963 DSCC1Q9BVC3 393 aa6.79□□□□□ -1.32
CPSF7-220ENST00000541963 KLHL25Q9H0H3 589 aa6.79□□□□□ -1.32
CPSF7-220ENST00000541963 ZNF451Q9Y4E5 1061 aa6.79□□□□□ -1.32
CPSF7-220ENST00000541963 IBTKQ9P2D0 1353 aaPredicted RBP6.79□□□□□ -1.32
CPSF7-220ENST00000541963 NUP98P52948 1817 aa6.78□□□□□ -1.32
CPSF7-220ENST00000541963 KLRG2A4D1S0 409 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-220ENST00000541963 LONRF2Q1L5Z9 754 aa6.78□□□□□ -1.32
CPSF7-220ENST00000541963 TWISTNBQ3B726 338 aaPredicted RBP6.78□□□□□ -1.32
CPSF7-220ENST00000541963 C2orf27AQ580R0 203 aa6.78□□□□□ -1.32
CPSF7-220ENST00000541963 SLC10A5Q5PT55 438 aa6.78□□□□□ -1.32
CPSF7-220ENST00000541963 TSR2Q969E8 191 aaKnown RBP6.78□□□□□ -1.32
CPSF7-220ENST00000541963 VWCEQ96DN2 955 aa6.78□□□□□ -1.32
CPSF7-220ENST00000541963 CDC6Q99741 560 aa6.78□□□□□ -1.32
CPSF7-220ENST00000541963 DBNDD2Q9BQY9 259 aa6.78□□□□□ -1.32
CPSF7-220ENST00000541963 OSBPL1AQ9BXW6 950 aa6.78□□□□□ -1.32
CPSF7-220ENST00000541963 GP6Q9HCN6 339 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms