RNA–Protein interactions for RNA: ENST00000541899.1

LRTOMT-219, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-219ENST00000541899 KCNG4Q8TDN1 519 aa17.56■□□□□ 0.4
LRTOMT-219ENST00000541899 FERMT2Q96AC1 680 aa17.56■□□□□ 0.4
LRTOMT-219ENST00000541899 SDF4Q9BRK5 362 aa17.56■□□□□ 0.4
LRTOMT-219ENST00000541899 HMX1Q9NP08 348 aaPredicted RBP17.56■□□□□ 0.4
LRTOMT-219ENST00000541899 PCDHA12Q9UN75 941 aa17.56■□□□□ 0.4
LRTOMT-219ENST00000541899 GNEQ9Y223 722 aaKnown RBP17.56■□□□□ 0.4
LRTOMT-219ENST00000541899 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.55■□□□□ 0.4
LRTOMT-219ENST00000541899 SPTLC2O15270 562 aa17.55■□□□□ 0.4
LRTOMT-219ENST00000541899 MARCH6O60337 910 aa17.55■□□□□ 0.4
LRTOMT-219ENST00000541899 MSCO60682 206 aa17.55■□□□□ 0.4
LRTOMT-219ENST00000541899 DUSP11O75319 330 aaKnown RBP17.55■□□□□ 0.4
LRTOMT-219ENST00000541899 GH1P01241 217 aa17.55■□□□□ 0.4
LRTOMT-219ENST00000541899 FXR2P51116 673 aaKnown RBP eCLIP17.55■□□□□ 0.4
LRTOMT-219ENST00000541899 NKX3-2P78367 333 aa17.55■□□□□ 0.4
LRTOMT-219ENST00000541899 CEBPZQ03701 1054 aaKnown RBP17.55■□□□□ 0.4
LRTOMT-219ENST00000541899 PPP2R5CQ13362 524 aa17.55■□□□□ 0.4
LRTOMT-219ENST00000541899 LAMC2Q13753 1193 aa17.55■□□□□ 0.4
LRTOMT-219ENST00000541899 STK38Q15208 465 aa17.55■□□□□ 0.4
LRTOMT-219ENST00000541899 LRCH2Q5VUJ6 765 aa17.55■□□□□ 0.4
LRTOMT-219ENST00000541899 METTL7BQ6UX53 244 aa17.55■□□□□ 0.4
LRTOMT-219ENST00000541899 DTHD1Q6ZMT9 781 aa17.55■□□□□ 0.4
LRTOMT-219ENST00000541899 ARMC5Q96C12 935 aa17.55■□□□□ 0.4
LRTOMT-219ENST00000541899 TEKT3Q9BXF9 490 aa17.55■□□□□ 0.4
LRTOMT-219ENST00000541899 TTC12Q9H892 705 aaPredicted RBP17.55■□□□□ 0.4
LRTOMT-219ENST00000541899 SRPRBQ9Y5M8 271 aaKnown RBP17.55■□□□□ 0.4
LRTOMT-219ENST00000541899 HTTP42858 3142 aa17.54■□□□□ 0.4
LRTOMT-219ENST00000541899 GAS7O60861 476 aa17.54■□□□□ 0.4
LRTOMT-219ENST00000541899 FARP2O94887 1054 aaPredicted RBP17.54■□□□□ 0.4
LRTOMT-219ENST00000541899 GGPS1O95749 300 aa17.54■□□□□ 0.4
LRTOMT-219ENST00000541899 CCND3P30281 292 aaPredicted RBP17.54■□□□□ 0.4
LRTOMT-219ENST00000541899 TXKP42681 527 aa17.54■□□□□ 0.4
LRTOMT-219ENST00000541899 KRT76Q01546 638 aa17.54■□□□□ 0.4
LRTOMT-219ENST00000541899 SPIRE1Q08AE8 756 aa17.54■□□□□ 0.4
LRTOMT-219ENST00000541899 ZNF746Q6NUN9 644 aaPredicted RBP17.54■□□□□ 0.4
LRTOMT-219ENST00000541899 DHX37Q8IY37 1157 aaKnown RBP17.54■□□□□ 0.4
LRTOMT-219ENST00000541899 SH3TC2Q8TF17 1288 aa17.54■□□□□ 0.4
LRTOMT-219ENST00000541899 LEO1Q8WVC0 666 aaPredicted RBP17.54■□□□□ 0.4
LRTOMT-219ENST00000541899 SPATA32Q96LK8 384 aa17.54■□□□□ 0.4
LRTOMT-219ENST00000541899 VAV3Q9UKW4 847 aa17.54■□□□□ 0.4
LRTOMT-219ENST00000541899 DOCK5Q9H7D0 1870 aa17.54■□□□□ 0.4
LRTOMT-219ENST00000541899 ADCY6O43306 1168 aa17.53■□□□□ 0.4
LRTOMT-219ENST00000541899 NCLP19338 710 aaKnown RBP17.53■□□□□ 0.4
LRTOMT-219ENST00000541899 ARHGAP1Q07960 439 aa17.53■□□□□ 0.4
LRTOMT-219ENST00000541899 IL17AQ16552 155 aa17.53■□□□□ 0.4
LRTOMT-219ENST00000541899 TMEM266Q2M3C6 531 aa17.53■□□□□ 0.4
LRTOMT-219ENST00000541899 TMEM63BQ5T3F8 832 aa17.53■□□□□ 0.4
LRTOMT-219ENST00000541899 CYFIP1Q7L576 1253 aa17.53■□□□□ 0.4
LRTOMT-219ENST00000541899 IGSF22Q8N9C0 903 aa17.53■□□□□ 0.4
LRTOMT-219ENST00000541899 RDM1Q8NG50 284 aa17.53■□□□□ 0.4
LRTOMT-219ENST00000541899 RAB34Q9BZG1 259 aa17.53■□□□□ 0.4
LRTOMT-219ENST00000541899 MLXIPQ9HAP2 919 aa17.53■□□□□ 0.4
LRTOMT-219ENST00000541899 JPH1Q9HDC5 661 aaPredicted RBP17.53■□□□□ 0.4
LRTOMT-219ENST00000541899 SLC9A2Q9UBY0 812 aa17.53■□□□□ 0.4
LRTOMT-219ENST00000541899 DDX20Q9UHI6 824 aaKnown RBP17.53■□□□□ 0.4
LRTOMT-219ENST00000541899 FBXO2Q9UK22 296 aaPredicted RBP17.53■□□□□ 0.4
LRTOMT-219ENST00000541899 ELP1O95163 1332 aa17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 ATG7O95352 703 aa17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 CNGA1P29973 690 aa17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 SFNP31947 248 aa17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 LONP1P36776 959 aaKnown RBP17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 TECP42680 631 aa17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 GJA9P57773 515 aa17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 CSPP1Q1MSJ5 1256 aa17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 SMAP1Q8IYB5 467 aaPredicted RBP17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 KRI1Q8N9T8 703 aaKnown RBP17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 ZNF579Q8NAF0 562 aaKnown RBP17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 PPTC7Q8NI37 304 aa17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 COPS5Q92905 334 aa17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 GJA10Q969M2 543 aa17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 ZNF333Q96JL9 665 aa17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 CHAMP1Q96JM3 812 aa17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 AK8Q96MA6 479 aa17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 UPF3AQ9H1J1 476 aaKnown RBP17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 BCAS3Q9H6U6 928 aa17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 PAK6Q9NQU5 681 aaPredicted RBP17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 TCEAL9Q9UHQ7 104 aa17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 STK24Q9Y6E0 443 aa17.52■□□□□ 0.4
LRTOMT-219ENST00000541899 CUTAO60888 179 aa17.51■□□□□ 0.39
LRTOMT-219ENST00000541899 RARBP10826 455 aa17.51■□□□□ 0.39
LRTOMT-219ENST00000541899 MARCKSP29966 332 aaPredicted RBP17.51■□□□□ 0.39
LRTOMT-219ENST00000541899 JAK3P52333 1124 aa17.51■□□□□ 0.39
LRTOMT-219ENST00000541899 TLK2Q86UE8 772 aa17.51■□□□□ 0.39
LRTOMT-219ENST00000541899 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.51■□□□□ 0.39
LRTOMT-219ENST00000541899 UNC45AQ9H3U1 944 aa17.51■□□□□ 0.39
LRTOMT-219ENST00000541899 PKD2L1Q9P0L9 805 aa17.51■□□□□ 0.39
LRTOMT-219ENST00000541899 FRMPD3Q5JV73 1810 aa17.51■□□□□ 0.39
LRTOMT-219ENST00000541899 POTEFA5A3E0 1075 aa17.5■□□□□ 0.39
LRTOMT-219ENST00000541899 VWA3AA6NCI4 1184 aa17.5■□□□□ 0.39
LRTOMT-219ENST00000541899 A6NJR5 290 aa17.5■□□□□ 0.39
LRTOMT-219ENST00000541899 WDR64B1ANS9 1081 aa17.5■□□□□ 0.39
LRTOMT-219ENST00000541899 DYNC1LI2O43237 492 aaPredicted RBP17.5■□□□□ 0.39
LRTOMT-219ENST00000541899 CCNE2O96020 404 aa17.5■□□□□ 0.39
LRTOMT-219ENST00000541899 HOXD8P13378 290 aaPredicted RBP17.5■□□□□ 0.39
LRTOMT-219ENST00000541899 CAPN2P17655 700 aa17.5■□□□□ 0.39
LRTOMT-219ENST00000541899 HSDL1Q3SXM5 330 aa17.5■□□□□ 0.39
LRTOMT-219ENST00000541899 LHX8Q68G74 356 aa17.5■□□□□ 0.39
LRTOMT-219ENST00000541899 ABHD15Q6UXT9 468 aa17.5■□□□□ 0.39
LRTOMT-219ENST00000541899 TMEM87AQ8NBN3 555 aa17.5■□□□□ 0.39
LRTOMT-219ENST00000541899 OR6J1Q8NGC5 347 aa17.5■□□□□ 0.39
LRTOMT-219ENST00000541899 SEPT1Q8WYJ6 367 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms