RNA–Protein interactions for RNA: ENST00000541108.1

CLIP1-215, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 1 (best)

Gene CLIP1, Length 1,658 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-215ENST00000541108 R3HDMLQ9H3Y0 253 aa19.91■□□□□ 0.78
CLIP1-215ENST00000541108 SOWAHBA6NEL2 793 aa19.9■□□□□ 0.78
CLIP1-215ENST00000541108 GTPBP6O43824 516 aaPredicted RBP19.9■□□□□ 0.78
CLIP1-215ENST00000541108 MUTP22033 750 aa19.9■□□□□ 0.78
CLIP1-215ENST00000541108 AFMP43652 599 aa19.9■□□□□ 0.78
CLIP1-215ENST00000541108 TM4SF4P48230 202 aa19.9■□□□□ 0.78
CLIP1-215ENST00000541108 AMPD3Q01432 767 aa19.9■□□□□ 0.78
CLIP1-215ENST00000541108 NCAPH2Q6IBW4 605 aa19.9■□□□□ 0.78
CLIP1-215ENST00000541108 TRIML1Q8N9V2 468 aa19.9■□□□□ 0.78
CLIP1-215ENST00000541108 SMARCE1Q969G3 411 aa19.9■□□□□ 0.78
CLIP1-215ENST00000541108 GSDMAQ96QA5 445 aa19.9■□□□□ 0.78
CLIP1-215ENST00000541108 MTRQ99707 1265 aa19.9■□□□□ 0.78
CLIP1-215ENST00000541108 POLR3CQ9BUI4 534 aaPredicted RBP19.9■□□□□ 0.78
CLIP1-215ENST00000541108 EFCC1Q9HA90 598 aa19.9■□□□□ 0.78
CLIP1-215ENST00000541108 ASTN1O14525 1302 aa19.89■□□□□ 0.78
CLIP1-215ENST00000541108 DPYDQ12882 1025 aa19.89■□□□□ 0.77
CLIP1-215ENST00000541108 SEMA3FQ13275 785 aa19.89■□□□□ 0.77
CLIP1-215ENST00000541108 WDR78Q5VTH9 848 aa19.89■□□□□ 0.77
CLIP1-215ENST00000541108 PLIN2Q99541 437 aa19.89■□□□□ 0.77
CLIP1-215ENST00000541108 RBSNQ9H1K0 784 aa19.89■□□□□ 0.77
CLIP1-215ENST00000541108 GRPEL1Q9HAV7 217 aa19.89■□□□□ 0.77
CLIP1-215ENST00000541108 ADGRA2Q96PE1 1338 aa19.89■□□□□ 0.77
CLIP1-215ENST00000541108 ZNFX1Q9P2E3 1918 aaKnown RBP19.88■□□□□ 0.77
CLIP1-215ENST00000541108 RGS20O76081 388 aa19.88■□□□□ 0.77
CLIP1-215ENST00000541108 MAPK4P31152 587 aa19.88■□□□□ 0.77
CLIP1-215ENST00000541108 ICAM3P32942 547 aa19.88■□□□□ 0.77
CLIP1-215ENST00000541108 NLRP12P59046 1061 aa19.88■□□□□ 0.77
CLIP1-215ENST00000541108 TAF1CQ15572 869 aaPredicted RBP19.88■□□□□ 0.77
CLIP1-215ENST00000541108 L1TD1Q5T7N2 865 aaKnown RBP19.88■□□□□ 0.77
CLIP1-215ENST00000541108 CATSPER3Q86XQ3 398 aa19.88■□□□□ 0.77
CLIP1-215ENST00000541108 GRAMD1CQ8IYS0 662 aa19.88■□□□□ 0.77
CLIP1-215ENST00000541108 LARP4BQ92615 738 aaKnown RBP19.88■□□□□ 0.77
CLIP1-215ENST00000541108 HSD17B14Q9BPX1 270 aa19.88■□□□□ 0.77
CLIP1-215ENST00000541108 LRRC27Q9C0I9 530 aa19.88■□□□□ 0.77
CLIP1-215ENST00000541108 TUFT1Q9NNX1 390 aa19.88■□□□□ 0.77
CLIP1-215ENST00000541108 BLOC1S4Q9NUP1 217 aa19.88■□□□□ 0.77
CLIP1-215ENST00000541108 IVNS1ABPQ9Y6Y0 642 aa19.88■□□□□ 0.77
CLIP1-215ENST00000541108 SPATA31C2B4DYI2 1134 aa19.87■□□□□ 0.77
CLIP1-215ENST00000541108 PRR29P0C7W0 189 aa19.87■□□□□ 0.77
CLIP1-215ENST00000541108 SPATA31C1P0DKV0 1188 aa19.87■□□□□ 0.77
CLIP1-215ENST00000541108 ITGB3BPQ13352 177 aaPredicted RBP19.87■□□□□ 0.77
CLIP1-215ENST00000541108 EPHA7Q15375 998 aa19.87■□□□□ 0.77
CLIP1-215ENST00000541108 SV2BQ7L1I2 683 aa19.87■□□□□ 0.77
CLIP1-215ENST00000541108 LRRC15Q8TF66 581 aa19.87■□□□□ 0.77
CLIP1-215ENST00000541108 EIF2AK1Q9BQI3 630 aaKnown RBP19.87■□□□□ 0.77
CLIP1-215ENST00000541108 EML1O00423 815 aa19.87■□□□□ 0.77
CLIP1-215ENST00000541108 TLR2O60603 784 aa19.87■□□□□ 0.77
CLIP1-215ENST00000541108 MED24O75448 989 aa19.87■□□□□ 0.77
CLIP1-215ENST00000541108 PGK2P07205 417 aa19.87■□□□□ 0.77
CLIP1-215ENST00000541108 PDE4DQ08499 809 aa19.87■□□□□ 0.77
CLIP1-215ENST00000541108 ECM1Q16610 540 aa19.87■□□□□ 0.77
CLIP1-215ENST00000541108 ANO6Q4KMQ2 910 aa19.87■□□□□ 0.77
CLIP1-215ENST00000541108 ZNF784Q8NCA9 323 aaPredicted RBP19.87■□□□□ 0.77
CLIP1-215ENST00000541108 FAM200AQ8TCP9 573 aa19.87■□□□□ 0.77
CLIP1-215ENST00000541108 NEK9Q8TD19 979 aa19.87■□□□□ 0.77
CLIP1-215ENST00000541108 MORC4Q8TE76 937 aa19.87■□□□□ 0.77
CLIP1-215ENST00000541108 RAD54LQ92698 747 aa19.87■□□□□ 0.77
CLIP1-215ENST00000541108 NAT10Q9H0A0 1025 aaKnown RBP19.87■□□□□ 0.77
CLIP1-215ENST00000541108 UNC45AQ9H3U1 944 aa19.87■□□□□ 0.77
CLIP1-215ENST00000541108 KIAA1024Q9UPX6 916 aa19.87■□□□□ 0.77
CLIP1-215ENST00000541108 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.86■□□□□ 0.77
CLIP1-215ENST00000541108 ATP9AO75110 1047 aa19.86■□□□□ 0.77
CLIP1-215ENST00000541108 TGFB3P10600 412 aa19.86■□□□□ 0.77
CLIP1-215ENST00000541108 YY1P25490 414 aa19.86■□□□□ 0.77
CLIP1-215ENST00000541108 KRT76Q01546 638 aa19.86■□□□□ 0.77
CLIP1-215ENST00000541108 REM2Q8IYK8 340 aaPredicted RBP19.86■□□□□ 0.77
CLIP1-215ENST00000541108 STAMQ92783 540 aa19.86■□□□□ 0.77
CLIP1-215ENST00000541108 FGD4Q96M96 766 aa19.86■□□□□ 0.77
CLIP1-215ENST00000541108 C7orf25Q9BPX7 421 aa19.86■□□□□ 0.77
CLIP1-215ENST00000541108 SENP7Q9BQF6 1050 aa19.86■□□□□ 0.77
CLIP1-215ENST00000541108 ZFYVE28Q9HCC9 887 aa19.86■□□□□ 0.77
CLIP1-215ENST00000541108 NFASCO94856 1347 aa19.86■□□□□ 0.77
CLIP1-215ENST00000541108 KIAA1217Q5T5P2 1943 aa19.85■□□□□ 0.77
CLIP1-215ENST00000541108 SLITRK3O94933 977 aa19.85■□□□□ 0.77
CLIP1-215ENST00000541108 SFNP31947 248 aa19.85■□□□□ 0.77
CLIP1-215ENST00000541108 ZNF165P49910 485 aa19.85■□□□□ 0.77
CLIP1-215ENST00000541108 NOGQ13253 232 aa19.85■□□□□ 0.77
CLIP1-215ENST00000541108 CUL4BQ13620 913 aa19.85■□□□□ 0.77
CLIP1-215ENST00000541108 C17orf99Q6UX52 265 aa19.85■□□□□ 0.77
CLIP1-215ENST00000541108 GPR142Q7Z601 462 aa19.85■□□□□ 0.77
CLIP1-215ENST00000541108 RDM1Q8NG50 284 aa19.85■□□□□ 0.77
CLIP1-215ENST00000541108 CREBZFQ9NS37 354 aa19.85■□□□□ 0.77
CLIP1-215ENST00000541108 TCEAL9Q9UHQ7 104 aa19.85■□□□□ 0.77
CLIP1-215ENST00000541108 MAN1B1Q9UKM7 699 aa19.85■□□□□ 0.77
CLIP1-215ENST00000541108 POTEB3A0JP26 581 aa19.84■□□□□ 0.77
CLIP1-215ENST00000541108 ASB14A6NK59 587 aa19.84■□□□□ 0.77
CLIP1-215ENST00000541108 RASSF10A6NK89 507 aa19.84■□□□□ 0.77
CLIP1-215ENST00000541108 BIN1O00499 593 aa19.84■□□□□ 0.77
CLIP1-215ENST00000541108 ALDH1A1P00352 501 aa19.84■□□□□ 0.77
CLIP1-215ENST00000541108 KCNA2P16389 499 aa19.84■□□□□ 0.77
CLIP1-215ENST00000541108 ADORA2AP29274 412 aa19.84■□□□□ 0.77
CLIP1-215ENST00000541108 MORC3Q14149 939 aa19.84■□□□□ 0.77
CLIP1-215ENST00000541108 UVSSAQ2YD98 709 aa19.84■□□□□ 0.77
CLIP1-215ENST00000541108 ZNF792Q3KQV3 632 aa19.84■□□□□ 0.77
CLIP1-215ENST00000541108 ZNF746Q6NUN9 644 aaPredicted RBP19.84■□□□□ 0.77
CLIP1-215ENST00000541108 CNNM4Q6P4Q7 775 aa19.84■□□□□ 0.77
CLIP1-215ENST00000541108 KCNV1Q6PIU1 500 aa19.84■□□□□ 0.77
CLIP1-215ENST00000541108 POTEBQ6S5H4 581 aa19.84■□□□□ 0.77
CLIP1-215ENST00000541108 MIER3Q7Z3K6 550 aa19.84■□□□□ 0.77
CLIP1-215ENST00000541108 ZNF467Q7Z7K2 595 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms