RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 SCN10AQ9Y5Y9 1956 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 BAZ2AQ9UIF9 1905 aaKnown RBP10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 ZNF292O60281 2723 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 LOC102724159A0A0B4J2E5 919 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 RBM47A0AV96 593 aaKnown RBP10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 MINDY4BA8MYZ0 360 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 C5orf67F2Z3F1 127 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 LGR5O75473 907 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 HSPD1P10809 573 aaKnown RBP10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 NDUFV1P49821 464 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 COASYQ13057 564 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 PWP2Q15269 919 aaKnown RBP10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 PTPN21Q16825 1174 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 TYW1BQ6NUM6 668 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 CWC27Q6UX04 472 aaKnown RBP10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 C16orf86Q6ZW13 317 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 AMOTL1Q8IY63 956 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 STK11IPQ8N1F8 1099 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 TOP1MTQ969P6 601 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 PPP2R3CQ969Q6 453 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 ZDHHC16Q969W1 377 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 CTAGE1Q96RT6 745 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 YME1L1Q96TA2 773 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 C11orf84Q9BUA3 381 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 SEMA4AQ9H3S1 761 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 IGFLR1Q9H665 355 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 PPP4R2Q9NY27 417 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 NYAP2Q9P242 653 aa10.41□□□□□ -0.74
TRAPPC1-202ENST00000540486 EMSYQ7Z589 1322 aa10.4□□□□□ -0.74
TRAPPC1-202ENST00000540486 NDUFB10O96000 172 aa10.4□□□□□ -0.74
TRAPPC1-202ENST00000540486 FGAP02671 866 aa10.4□□□□□ -0.74
TRAPPC1-202ENST00000540486 ATF7P17544 494 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC1-202ENST00000540486 CHMLP26374 656 aa10.4□□□□□ -0.74
TRAPPC1-202ENST00000540486 MLLT3P42568 568 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC1-202ENST00000540486 ALX1Q15699 326 aa10.4□□□□□ -0.74
TRAPPC1-202ENST00000540486 DHX38Q92620 1227 aaKnown RBP10.4□□□□□ -0.74
TRAPPC1-202ENST00000540486 DDRGK1Q96HY6 314 aa10.4□□□□□ -0.74
TRAPPC1-202ENST00000540486 INCENPQ9NQS7 918 aa10.4□□□□□ -0.74
TRAPPC1-202ENST00000540486 RNF146Q9NTX7 359 aa10.4□□□□□ -0.74
TRAPPC1-202ENST00000540486 DLL3Q9NYJ7 618 aa10.4□□□□□ -0.74
TRAPPC1-202ENST00000540486 ARPP21Q9UBL0 812 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC1-202ENST00000540486 ADD3Q9UEY8 706 aaKnown RBP10.4□□□□□ -0.74
TRAPPC1-202ENST00000540486 RWDD3Q9Y3V2 267 aa10.4□□□□□ -0.74
TRAPPC1-202ENST00000540486 CHD6Q8TD26 2715 aa10.4□□□□□ -0.75
TRAPPC1-202ENST00000540486 LINC01565O15544 149 aa10.39□□□□□ -0.75
TRAPPC1-202ENST00000540486 PDGFBP01127 241 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC1-202ENST00000540486 BMPR1AP36894 532 aa10.39□□□□□ -0.75
TRAPPC1-202ENST00000540486 TDO2P48775 406 aa10.39□□□□□ -0.75
TRAPPC1-202ENST00000540486 ST3GAL2Q16842 350 aa10.39□□□□□ -0.75
TRAPPC1-202ENST00000540486 GDF6Q6KF10 455 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC1-202ENST00000540486 LRRC47Q8N1G4 583 aaKnown RBP10.39□□□□□ -0.75
TRAPPC1-202ENST00000540486 TMEM105Q8N8V8 129 aa10.39□□□□□ -0.75
TRAPPC1-202ENST00000540486 PPP1R13LQ8WUF5 828 aa10.39□□□□□ -0.75
TRAPPC1-202ENST00000540486 RPGRIP1Q96KN7 1286 aa10.39□□□□□ -0.75
TRAPPC1-202ENST00000540486 TRERF1Q96PN7 1200 aa10.39□□□□□ -0.75
TRAPPC1-202ENST00000540486 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.39□□□□□ -0.75
TRAPPC1-202ENST00000540486 NACAP1Q9BZK3 213 aa10.39□□□□□ -0.75
TRAPPC1-202ENST00000540486 NAPBQ9H115 298 aa10.39□□□□□ -0.75
TRAPPC1-202ENST00000540486 CYP39A1Q9NYL5 469 aa10.39□□□□□ -0.75
TRAPPC1-202ENST00000540486 CLEC1BQ9P126 229 aa10.39□□□□□ -0.75
TRAPPC1-202ENST00000540486 DDX49Q9Y6V7 483 aaKnown RBP10.39□□□□□ -0.75
TRAPPC1-202ENST00000540486 CFAP47Q6ZTR5 3102 aa10.39□□□□□ -0.75
TRAPPC1-202ENST00000540486 TRIP12Q14669 1992 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC1-202ENST00000540486 DMXL1Q9Y485 3027 aa10.39□□□□□ -0.75
TRAPPC1-202ENST00000540486 CCDC171Q6TFL3 1326 aa10.38□□□□□ -0.75
TRAPPC1-202ENST00000540486 WDR87Q6ZQQ6 2873 aa10.38□□□□□ -0.75
TRAPPC1-202ENST00000540486 HIP1O00291 1037 aa10.38□□□□□ -0.75
TRAPPC1-202ENST00000540486 GRM6O15303 877 aa10.38□□□□□ -0.75
TRAPPC1-202ENST00000540486 GTF2F1P35269 517 aaKnown RBP eCLIP10.38□□□□□ -0.75
TRAPPC1-202ENST00000540486 CLCN5P51795 746 aa10.38□□□□□ -0.75
TRAPPC1-202ENST00000540486 CTDSPL2Q05D32 466 aa10.38□□□□□ -0.75
TRAPPC1-202ENST00000540486 PPARAQ07869 468 aa10.38□□□□□ -0.75
TRAPPC1-202ENST00000540486 PTK7Q13308 1070 aa10.38□□□□□ -0.75
TRAPPC1-202ENST00000540486 UBALD2Q8IYN6 164 aa10.38□□□□□ -0.75
TRAPPC1-202ENST00000540486 FIBCD1Q8N539 461 aa10.38□□□□□ -0.75
TRAPPC1-202ENST00000540486 EFHBQ8N7U6 833 aa10.38□□□□□ -0.75
TRAPPC1-202ENST00000540486 DBF4BQ8NFT6 615 aa10.38□□□□□ -0.75
TRAPPC1-202ENST00000540486 DIAPH3Q9NSV4 1193 aa10.38□□□□□ -0.75
TRAPPC1-202ENST00000540486 SYNPO2Q9UMS6 1093 aa10.38□□□□□ -0.75
TRAPPC1-202ENST00000540486 USP15Q9Y4E8 981 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC1-202ENST00000540486 NAV1Q8NEY1 1877 aa10.38□□□□□ -0.75
TRAPPC1-202ENST00000540486 PRDM1O75626 825 aa10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 LMNAP02545 664 aaKnown RBP10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 FGRP09769 529 aa10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 RASA1P20936 1047 aa10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 CTNNB1P35222 781 aa10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 CHMP4BP1P59074 171 aa10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 NBR1Q14596 966 aa10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 PPP2R5BQ15173 497 aa10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 PLEKHG4Q58EX7 1191 aa10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 ZNF618Q5T7W0 954 aa10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 TRAF7Q6Q0C0 670 aa10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 ZBTB33Q86T24 672 aa10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 KIAA2013Q8IYS2 634 aa10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 SCFD2Q8WU76 684 aa10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 CHURC1Q8WUH1 139 aa10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 MKL1Q969V6 931 aa10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 COL26A1Q96A83 441 aa10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 IL17RAQ96F46 866 aa10.37□□□□□ -0.75
TRAPPC1-202ENST00000540486 ADAM33Q9BZ11 813 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms