RNA–Protein interactions for RNA: ENST00000539960.1

PRPF19-204, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 2

Gene PRPF19, Length 796 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-204ENST00000539960 IGLV3-22A0A075B6J6 115 aa15.28■□□□□ 0.04
PRPF19-204ENST00000539960 PSMC6P62333 389 aa15.28■□□□□ 0.04
PRPF19-204ENST00000539960 NONOQ15233 471 aaKnown RBP eCLIP15.28■□□□□ 0.04
PRPF19-204ENST00000539960 KRT40Q6A162 431 aa15.28■□□□□ 0.04
PRPF19-204ENST00000539960 GPR20Q99678 358 aa15.28■□□□□ 0.04
PRPF19-204ENST00000539960 AGO4Q9HCK5 861 aaKnown RBP15.28■□□□□ 0.04
PRPF19-204ENST00000539960 PKD2L1Q9P0L9 805 aa15.28■□□□□ 0.04
PRPF19-204ENST00000539960 CCDC194A0A1B0GVG4 234 aa15.27■□□□□ 0.04
PRPF19-204ENST00000539960 DCDC2CA8MYV0 355 aa15.27■□□□□ 0.04
PRPF19-204ENST00000539960 NOP56O00567 594 aaKnown RBP15.27■□□□□ 0.04
PRPF19-204ENST00000539960 PQBP1O60828 265 aaKnown RBP15.27■□□□□ 0.04
PRPF19-204ENST00000539960 MMP1P03956 469 aa15.27■□□□□ 0.04
PRPF19-204ENST00000539960 KRT2P35908 639 aa15.27■□□□□ 0.04
PRPF19-204ENST00000539960 FOSBP53539 338 aa15.27■□□□□ 0.04
PRPF19-204ENST00000539960 NBPF20Q3BBV1 942 aa15.27■□□□□ 0.04
PRPF19-204ENST00000539960 FAM184AQ8NB25 1140 aa15.27■□□□□ 0.04
PRPF19-204ENST00000539960 KAT2BQ92831 832 aa15.27■□□□□ 0.04
PRPF19-204ENST00000539960 C8orf76Q96K31 380 aa15.27■□□□□ 0.04
PRPF19-204ENST00000539960 BRMS1Q9HCU9 246 aa15.27■□□□□ 0.04
PRPF19-204ENST00000539960 ZMYND8Q9ULU4 1186 aaPredicted RBP15.27■□□□□ 0.04
PRPF19-204ENST00000539960 NFASCO94856 1347 aa15.26■□□□□ 0.03
PRPF19-204ENST00000539960 MROH7Q68CQ1 1323 aa15.26■□□□□ 0.03
PRPF19-204ENST00000539960 CYP3A7-CYP3A51PA0A087WV96 503 aa15.26■□□□□ 0.03
PRPF19-204ENST00000539960 BTBD18B2RXH4 712 aa15.26■□□□□ 0.03
PRPF19-204ENST00000539960 CYP3A7P24462 503 aa15.26■□□□□ 0.03
PRPF19-204ENST00000539960 FAAP100Q0VG06 881 aa15.26■□□□□ 0.03
PRPF19-204ENST00000539960 NR5A1Q13285 461 aa15.26■□□□□ 0.03
PRPF19-204ENST00000539960 ITGB3BPQ13352 177 aaPredicted RBP15.26■□□□□ 0.03
PRPF19-204ENST00000539960 INF2Q27J81 1249 aa15.26■□□□□ 0.03
PRPF19-204ENST00000539960 PRR16Q569H4 304 aa15.26■□□□□ 0.03
PRPF19-204ENST00000539960 PRPF38BQ5VTL8 546 aaKnown RBP15.26■□□□□ 0.03
PRPF19-204ENST00000539960 FBXO18Q8NFZ0 1043 aa15.26■□□□□ 0.03
PRPF19-204ENST00000539960 SEPT1Q8WYJ6 367 aa15.26■□□□□ 0.03
PRPF19-204ENST00000539960 TNFRSF25Q93038 417 aa15.26■□□□□ 0.03
PRPF19-204ENST00000539960 SDF4Q9BRK5 362 aa15.26■□□□□ 0.03
PRPF19-204ENST00000539960 C16orf70Q9BSU1 422 aa15.26■□□□□ 0.03
PRPF19-204ENST00000539960 TELO2Q9Y4R8 837 aa15.26■□□□□ 0.03
PRPF19-204ENST00000539960 GSTTP1A0A1W2PQM5 241 aa15.25■□□□□ 0.03
PRPF19-204ENST00000539960 HAS3O00219 553 aa15.25■□□□□ 0.03
PRPF19-204ENST00000539960 IPO5O00410 1097 aaKnown RBP15.25■□□□□ 0.03
PRPF19-204ENST00000539960 DHX15O43143 795 aaKnown RBP15.25■□□□□ 0.03
PRPF19-204ENST00000539960 F2P00734 622 aa15.25■□□□□ 0.03
PRPF19-204ENST00000539960 CLTBP09497 229 aa15.25■□□□□ 0.03
PRPF19-204ENST00000539960 SYN1P17600 705 aa15.25■□□□□ 0.03
PRPF19-204ENST00000539960 SETQ01105 290 aaPredicted RBP15.25■□□□□ 0.03
PRPF19-204ENST00000539960 SP4Q02446 784 aa15.25■□□□□ 0.03
PRPF19-204ENST00000539960 SAFBQ15424 915 aaKnown RBP eCLIP15.25■□□□□ 0.03
PRPF19-204ENST00000539960 NFRKBQ6P4R8 1299 aa15.25■□□□□ 0.03
PRPF19-204ENST00000539960 PIK3AP1Q6ZUJ8 805 aa15.25■□□□□ 0.03
PRPF19-204ENST00000539960 SH3RF1Q7Z6J0 888 aa15.25■□□□□ 0.03
PRPF19-204ENST00000539960 FAM126BQ8IXS8 530 aa15.25■□□□□ 0.03
PRPF19-204ENST00000539960 DIS3L2Q8IYB7 885 aaKnown RBP15.25■□□□□ 0.03
PRPF19-204ENST00000539960 LENG9Q96B70 501 aa15.25■□□□□ 0.03
PRPF19-204ENST00000539960 ZNF577Q9BSK1 485 aa15.25■□□□□ 0.03
PRPF19-204ENST00000539960 JPH1Q9HDC5 661 aaPredicted RBP15.25■□□□□ 0.03
PRPF19-204ENST00000539960 SLC9A2Q9UBY0 812 aa15.25■□□□□ 0.03
PRPF19-204ENST00000539960 TRIM43BA6NCK2 446 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 H3BRB1 525 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 TLR3O15455 904 aaKnown RBP15.24■□□□□ 0.03
PRPF19-204ENST00000539960 CD4P01730 458 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 LGALS2P05162 132 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 ZNF286BP0CG31 522 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 PSEN2P49810 448 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 CHMP4BP1P59074 171 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 GUCY1B3Q02153 619 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 PTPN11Q06124 597 aaPredicted RBP15.24■□□□□ 0.03
PRPF19-204ENST00000539960 CUL4AQ13619 759 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 MFSD10Q14728 455 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 KIAA0753Q2KHM9 967 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 Q4G0T1 1027 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 EARS2Q5JPH6 523 aaKnown RBP15.24■□□□□ 0.03
PRPF19-204ENST00000539960 MOXD1Q6UVY6 613 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 NEK8Q86SG6 692 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 TRIM43Q96BQ3 446 aaPredicted RBP15.24■□□□□ 0.03
PRPF19-204ENST00000539960 MBOAT7Q96N66 472 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 UIMC1Q96RL1 719 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 KATNAL1Q9BW62 490 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 TRPV6Q9H1D0 765 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 TUT1Q9H6E5 874 aaKnown RBP15.24■□□□□ 0.03
PRPF19-204ENST00000539960 PDLIM7Q9NR12 457 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 TBC1D22BQ9NU19 505 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 TMEM39AQ9NV64 488 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 PRKAG2Q9UGJ0 569 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 KIF3AQ9Y496 699 aa15.24■□□□□ 0.03
PRPF19-204ENST00000539960 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.24■□□□□ 0.03
PRPF19-204ENST00000539960 KIAA0355O15063 1070 aa15.23■□□□□ 0.03
PRPF19-204ENST00000539960 MSH4O15457 936 aa15.23■□□□□ 0.03
PRPF19-204ENST00000539960 TDP2O95551 362 aa15.23■□□□□ 0.03
PRPF19-204ENST00000539960 TCF7P36402 384 aaPredicted RBP15.23■□□□□ 0.03
PRPF19-204ENST00000539960 ACTR2P61160 394 aa15.23■□□□□ 0.03
PRPF19-204ENST00000539960 LETM2Q2VYF4 491 aa15.23■□□□□ 0.03
PRPF19-204ENST00000539960 FAM47CQ5HY64 1035 aa15.23■□□□□ 0.03
PRPF19-204ENST00000539960 UTP14CQ5TAP6 766 aaKnown RBP15.23■□□□□ 0.03
PRPF19-204ENST00000539960 PPP4R3AQ6IN85 833 aa15.23■□□□□ 0.03
PRPF19-204ENST00000539960 SESTD1Q86VW0 696 aa15.23■□□□□ 0.03
PRPF19-204ENST00000539960 PPP1R13LQ8WUF5 828 aa15.23■□□□□ 0.03
PRPF19-204ENST00000539960 PRDM5Q9NQX1 630 aaPredicted RBP15.23■□□□□ 0.03
PRPF19-204ENST00000539960 MYH7BA7E2Y1 1941 aa15.22■□□□□ 0.03
PRPF19-204ENST00000539960 FAM205CA6NFA0 338 aa15.22■□□□□ 0.03
PRPF19-204ENST00000539960 B4GALT4O60513 344 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms