RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 MLXIPQ9HAP2 919 aa17.43■□□□□ 0.38
DDB1-216ENST00000539739 NFASCO94856 1347 aa17.43■□□□□ 0.38
DDB1-216ENST00000539739 KIAA1217Q5T5P2 1943 aa17.42■□□□□ 0.38
DDB1-216ENST00000539739 MSCO60682 206 aa17.42■□□□□ 0.38
DDB1-216ENST00000539739 YEATS4O95619 227 aa17.42■□□□□ 0.38
DDB1-216ENST00000539739 GGPS1O95749 300 aa17.42■□□□□ 0.38
DDB1-216ENST00000539739 GH1P01241 217 aa17.42■□□□□ 0.38
DDB1-216ENST00000539739 ATP2C1P98194 919 aaPredicted RBP17.42■□□□□ 0.38
DDB1-216ENST00000539739 SP2Q02086 613 aa17.42■□□□□ 0.38
DDB1-216ENST00000539739 ARL6IP4Q66PJ3 421 aaKnown RBP17.42■□□□□ 0.38
DDB1-216ENST00000539739 C4orf32Q8N8J7 132 aa17.42■□□□□ 0.38
DDB1-216ENST00000539739 HAS1Q92839 578 aa17.42■□□□□ 0.38
DDB1-216ENST00000539739 UIMC1Q96RL1 719 aa17.42■□□□□ 0.38
DDB1-216ENST00000539739 TEKT3Q9BXF9 490 aa17.42■□□□□ 0.38
DDB1-216ENST00000539739 PCDHA12Q9UN75 941 aa17.42■□□□□ 0.38
DDB1-216ENST00000539739 Q9Y3F1 56 aa17.42■□□□□ 0.38
DDB1-216ENST00000539739 RARBP10826 455 aa17.41■□□□□ 0.38
DDB1-216ENST00000539739 PRPHP41219 470 aa17.41■□□□□ 0.38
DDB1-216ENST00000539739 TXKP42681 527 aa17.41■□□□□ 0.38
DDB1-216ENST00000539739 ITGB3BPQ13352 177 aaPredicted RBP17.41■□□□□ 0.38
DDB1-216ENST00000539739 LAMC2Q13753 1193 aa17.41■□□□□ 0.38
DDB1-216ENST00000539739 SLC39A14Q15043 492 aa17.41■□□□□ 0.38
DDB1-216ENST00000539739 TMEM266Q2M3C6 531 aa17.41■□□□□ 0.38
DDB1-216ENST00000539739 CELF3Q5SZQ8 465 aaKnown RBP17.41■□□□□ 0.38
DDB1-216ENST00000539739 CYFIP1Q7L576 1253 aa17.41■□□□□ 0.38
DDB1-216ENST00000539739 LINC00301Q8NCQ3 95 aa17.41■□□□□ 0.38
DDB1-216ENST00000539739 TNPO1Q92973 898 aaKnown RBP17.41■□□□□ 0.38
DDB1-216ENST00000539739 SCAND2PQ9GZW5 306 aaPredicted RBP17.41■□□□□ 0.38
DDB1-216ENST00000539739 DUSP11O75319 330 aaKnown RBP17.4■□□□□ 0.38
DDB1-216ENST00000539739 PSMD10O75832 226 aa17.4■□□□□ 0.38
DDB1-216ENST00000539739 PTPAQ15257 358 aa17.4■□□□□ 0.38
DDB1-216ENST00000539739 METTL7BQ6UX53 244 aa17.4■□□□□ 0.38
DDB1-216ENST00000539739 DTHD1Q6ZMT9 781 aa17.4■□□□□ 0.38
DDB1-216ENST00000539739 OR6J1Q8NGC5 347 aa17.4■□□□□ 0.38
DDB1-216ENST00000539739 KCNG4Q8TDN1 519 aa17.4■□□□□ 0.38
DDB1-216ENST00000539739 COPS5Q92905 334 aa17.4■□□□□ 0.38
DDB1-216ENST00000539739 GJA10Q969M2 543 aa17.4■□□□□ 0.38
DDB1-216ENST00000539739 ARMC5Q96C12 935 aa17.4■□□□□ 0.38
DDB1-216ENST00000539739 MCOLN1Q9GZU1 580 aa17.4■□□□□ 0.38
DDB1-216ENST00000539739 AP5M1Q9H0R1 490 aa17.4■□□□□ 0.38
DDB1-216ENST00000539739 TTC12Q9H892 705 aaPredicted RBP17.4■□□□□ 0.38
DDB1-216ENST00000539739 SPC25Q9HBM1 224 aa17.4■□□□□ 0.38
DDB1-216ENST00000539739 JPH1Q9HDC5 661 aaPredicted RBP17.4■□□□□ 0.38
DDB1-216ENST00000539739 SLC9A2Q9UBY0 812 aa17.4■□□□□ 0.38
DDB1-216ENST00000539739 DDX20Q9UHI6 824 aaKnown RBP17.4■□□□□ 0.38
DDB1-216ENST00000539739 GNEQ9Y223 722 aaKnown RBP17.4■□□□□ 0.38
DDB1-216ENST00000539739 DDX39AO00148 427 aaKnown RBP17.39■□□□□ 0.38
DDB1-216ENST00000539739 SPTLC2O15270 562 aa17.39■□□□□ 0.38
DDB1-216ENST00000539739 DHX15O43143 795 aaKnown RBP17.39■□□□□ 0.38
DDB1-216ENST00000539739 DYNC1LI2O43237 492 aaPredicted RBP17.39■□□□□ 0.38
DDB1-216ENST00000539739 KRT76Q01546 638 aa17.39■□□□□ 0.38
DDB1-216ENST00000539739 TLK2Q86UE8 772 aa17.39■□□□□ 0.38
DDB1-216ENST00000539739 EMID1Q96A84 441 aaPredicted RBP17.39■□□□□ 0.38
DDB1-216ENST00000539739 SPATA32Q96LK8 384 aa17.39■□□□□ 0.38
DDB1-216ENST00000539739 RAB34Q9BZG1 259 aa17.39■□□□□ 0.38
DDB1-216ENST00000539739 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.39■□□□□ 0.38
DDB1-216ENST00000539739 MORC2Q9Y6X9 1032 aaPredicted RBP17.39■□□□□ 0.38
DDB1-216ENST00000539739 NOP56O00567 594 aaKnown RBP17.39■□□□□ 0.37
DDB1-216ENST00000539739 SORBS3O60504 671 aa17.39■□□□□ 0.37
DDB1-216ENST00000539739 FARP2O94887 1054 aaPredicted RBP17.39■□□□□ 0.37
DDB1-216ENST00000539739 CCL5P13501 91 aa17.39■□□□□ 0.37
DDB1-216ENST00000539739 BRDTQ58F21 947 aaPredicted RBP17.39■□□□□ 0.37
DDB1-216ENST00000539739 TMEM63BQ5T3F8 832 aa17.39■□□□□ 0.37
DDB1-216ENST00000539739 GJC2Q5T442 439 aaPredicted RBP17.39■□□□□ 0.37
DDB1-216ENST00000539739 FERMT2Q96AC1 680 aa17.39■□□□□ 0.37
DDB1-216ENST00000539739 ZNF333Q96JL9 665 aa17.39■□□□□ 0.37
DDB1-216ENST00000539739 SPATA33Q96N06 139 aa17.39■□□□□ 0.37
DDB1-216ENST00000539739 RNF208Q9H0X6 261 aa17.39■□□□□ 0.37
DDB1-216ENST00000539739 UNC93B1Q9H1C4 597 aa17.39■□□□□ 0.37
DDB1-216ENST00000539739 RCOR1Q9UKL0 485 aa17.39■□□□□ 0.37
DDB1-216ENST00000539739 MYH15Q9Y2K3 1946 aa17.38■□□□□ 0.37
DDB1-216ENST00000539739 ADCY6O43306 1168 aa17.38■□□□□ 0.37
DDB1-216ENST00000539739 PPP6R2O75170 966 aa17.38■□□□□ 0.37
DDB1-216ENST00000539739 MYCP01106 439 aaPredicted RBP17.38■□□□□ 0.37
DDB1-216ENST00000539739 MARCKSP29966 332 aaPredicted RBP17.38■□□□□ 0.37
DDB1-216ENST00000539739 TECP42680 631 aa17.38■□□□□ 0.37
DDB1-216ENST00000539739 ARHGAP1Q07960 439 aa17.38■□□□□ 0.37
DDB1-216ENST00000539739 MTFR1Q15390 333 aa17.38■□□□□ 0.37
DDB1-216ENST00000539739 ZNF746Q6NUN9 644 aaPredicted RBP17.38■□□□□ 0.37
DDB1-216ENST00000539739 BCAS3Q9H6U6 928 aa17.38■□□□□ 0.37
DDB1-216ENST00000539739 VWA3AA6NCI4 1184 aa17.37■□□□□ 0.37
DDB1-216ENST00000539739 FXR2P51116 673 aaKnown RBP eCLIP17.37■□□□□ 0.372e-7■■■■■ 27.8
DDB1-216ENST00000539739 SP4Q02446 784 aa17.37■□□□□ 0.37
DDB1-216ENST00000539739 PPP2R5CQ13362 524 aa17.37■□□□□ 0.37
DDB1-216ENST00000539739 PDIA5Q14554 519 aa17.37■□□□□ 0.37
DDB1-216ENST00000539739 CSPP1Q1MSJ5 1256 aa17.37■□□□□ 0.37
DDB1-216ENST00000539739 SMAP1Q8IYB5 467 aaPredicted RBP17.37■□□□□ 0.37
DDB1-216ENST00000539739 KRI1Q8N9T8 703 aaKnown RBP17.37■□□□□ 0.37
DDB1-216ENST00000539739 PPTC7Q8NI37 304 aa17.37■□□□□ 0.37
DDB1-216ENST00000539739 LENG1Q96BZ8 264 aaPredicted RBP17.37■□□□□ 0.37
DDB1-216ENST00000539739 CHAMP1Q96JM3 812 aa17.37■□□□□ 0.37
DDB1-216ENST00000539739 XPNPEP3Q9NQH7 507 aa17.37■□□□□ 0.37
DDB1-216ENST00000539739 SRPRBQ9Y5M8 271 aaKnown RBP17.37■□□□□ 0.37
DDB1-216ENST00000539739 HTTP42858 3142 aa17.37■□□□□ 0.37
DDB1-216ENST00000539739 WDR64B1ANS9 1081 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 CHMP2AO43633 222 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 SFNP31947 248 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 CPT1AP50416 773 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 JAK3P52333 1124 aa17.36■□□□□ 0.37
DDB1-216ENST00000539739 GJA9P57773 515 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms