RNA–Protein interactions for RNA: ENST00000539662.1

HMGA2-209, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3

Gene HMGA2, Length 485 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-209ENST00000539662 GPRASP2Q96D09 838 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 GPR20Q99678 358 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 C16orf70Q9BSU1 422 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 ALG1Q9BT22 464 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 PPP1R12CQ9BZL4 782 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 MLXIPQ9HAP2 919 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 KCNH7Q9NS40 1196 aa12.24□□□□□ -0.45
HMGA2-209ENST00000539662 STK36Q9NRP7 1315 aa12.23□□□□□ -0.45
HMGA2-209ENST00000539662 IGLV3-22A0A075B6J6 115 aa12.23□□□□□ -0.45
HMGA2-209ENST00000539662 GSTTP1A0A1W2PQM5 241 aa12.23□□□□□ -0.45
HMGA2-209ENST00000539662 FAM205CA6NFA0 338 aa12.23□□□□□ -0.45
HMGA2-209ENST00000539662 HAS3O00219 553 aa12.23□□□□□ -0.45
HMGA2-209ENST00000539662 FOSP01100 380 aaPredicted RBP12.23□□□□□ -0.45
HMGA2-209ENST00000539662 CYP2C18P33260 490 aa12.23□□□□□ -0.45
HMGA2-209ENST00000539662 PSEN2P49810 448 aa12.23□□□□□ -0.45
HMGA2-209ENST00000539662 NLRP5P59047 1200 aa12.23□□□□□ -0.45
HMGA2-209ENST00000539662 MTMR1Q13613 665 aa12.23□□□□□ -0.45
HMGA2-209ENST00000539662 DGKDQ16760 1214 aa12.23□□□□□ -0.45
HMGA2-209ENST00000539662 CEP55Q53EZ4 464 aa12.23□□□□□ -0.45
HMGA2-209ENST00000539662 EARS2Q5JPH6 523 aaKnown RBP12.23□□□□□ -0.45
HMGA2-209ENST00000539662 C9orf50Q5SZB4 431 aa12.23□□□□□ -0.45
HMGA2-209ENST00000539662 GDF6Q6KF10 455 aaPredicted RBP12.23□□□□□ -0.45
HMGA2-209ENST00000539662 METTL7BQ6UX53 244 aa12.23□□□□□ -0.45
HMGA2-209ENST00000539662 NLRX1Q86UT6 975 aa12.23□□□□□ -0.45
HMGA2-209ENST00000539662 CCDC83Q8IWF9 413 aa12.23□□□□□ -0.45
HMGA2-209ENST00000539662 GJA10Q969M2 543 aa12.23□□□□□ -0.45
HMGA2-209ENST00000539662 AGO4Q9HCK5 861 aaKnown RBP12.23□□□□□ -0.45
HMGA2-209ENST00000539662 SH3GLB2Q9NR46 395 aa12.23□□□□□ -0.45
HMGA2-209ENST00000539662 ORC3Q9UBD5 711 aaPredicted RBP12.23□□□□□ -0.45
HMGA2-209ENST00000539662 PCDHA4Q9UN74 947 aa12.23□□□□□ -0.45
HMGA2-209ENST00000539662 LAMA2P24043 3122 aaKnown RBP12.23□□□□□ -0.45
HMGA2-209ENST00000539662 SCN5AQ14524 2016 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 MEIS1O00470 390 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 SOX1O00570 391 aaPredicted RBP12.22□□□□□ -0.45
HMGA2-209ENST00000539662 EIF5BO60841 1220 aaKnown RBP12.22□□□□□ -0.45
HMGA2-209ENST00000539662 PPFIA4O75335 1185 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 F2P00734 622 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 LGALS2P05162 132 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 CYP3A4P08684 503 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 RAG1P15918 1043 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 GNA11P29992 359 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 NEDD9Q14511 834 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 MFSD10Q14728 455 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 KIAA0753Q2KHM9 967 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 BRDTQ58F21 947 aaPredicted RBP12.22□□□□□ -0.45
HMGA2-209ENST00000539662 UTP14CQ5TAP6 766 aaKnown RBP12.22□□□□□ -0.45
HMGA2-209ENST00000539662 CPLX2Q6PUV4 134 aaKnown RBP12.22□□□□□ -0.45
HMGA2-209ENST00000539662 C16orf59Q7L2K0 433 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 BLIDQ8IZY5 108 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 CCDC148Q8NFR7 591 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 CCDC12Q8WUD4 166 aaPredicted RBP12.22□□□□□ -0.45
HMGA2-209ENST00000539662 WNT8BQ93098 351 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 LENG9Q96B70 501 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 VWCEQ96DN2 955 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 TBC1D32Q96NH3 1257 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 PCYT2Q99447 389 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 SENP7Q9BQF6 1050 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 PHF20Q9BVI0 1012 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 BACH2Q9BYV9 841 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 UBE2OQ9C0C9 1292 aaKnown RBP12.22□□□□□ -0.45
HMGA2-209ENST00000539662 GLT8D2Q9H1C3 349 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 HDAC6Q9UBN7 1215 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 PRKAG2Q9UGJ0 569 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 LIMCH1Q9UPQ0 1083 aa12.22□□□□□ -0.45
HMGA2-209ENST00000539662 MROH7Q68CQ1 1323 aa12.21□□□□□ -0.45
HMGA2-209ENST00000539662 DDX39AO00148 427 aaKnown RBP12.21□□□□□ -0.45
HMGA2-209ENST00000539662 DHX15O43143 795 aaKnown RBP12.21□□□□□ -0.45
HMGA2-209ENST00000539662 KPNA6O60684 536 aa12.21□□□□□ -0.45
HMGA2-209ENST00000539662 CCNE2O96020 404 aa12.21□□□□□ -0.45
HMGA2-209ENST00000539662 TIMP1P01033 207 aa12.21□□□□□ -0.45
HMGA2-209ENST00000539662 BMP8BP34820 402 aa12.21□□□□□ -0.45
HMGA2-209ENST00000539662 CCL23P55773 120 aa12.21□□□□□ -0.45
HMGA2-209ENST00000539662 NFRKBQ6P4R8 1299 aa12.21□□□□□ -0.45
HMGA2-209ENST00000539662 PLA2G4DQ86XP0 818 aa12.21□□□□□ -0.45
HMGA2-209ENST00000539662 DAGLBQ8NCG7 672 aa12.21□□□□□ -0.45
HMGA2-209ENST00000539662 DHX38Q92620 1227 aaKnown RBP12.21□□□□□ -0.45
HMGA2-209ENST00000539662 NOC4LQ9BVI4 516 aaKnown RBP12.21□□□□□ -0.45
HMGA2-209ENST00000539662 WNT8AQ9H1J5 351 aa12.21□□□□□ -0.45
HMGA2-209ENST00000539662 EHMT1Q9H9B1 1298 aa12.21□□□□□ -0.45
HMGA2-209ENST00000539662 NOP56O00567 594 aaKnown RBP12.2□□□□□ -0.46
HMGA2-209ENST00000539662 TLR3O15455 904 aaKnown RBP12.2□□□□□ -0.46
HMGA2-209ENST00000539662 CDKL5O76039 1030 aa12.2□□□□□ -0.46
HMGA2-209ENST00000539662 TDP2O95551 362 aa12.2□□□□□ -0.46
HMGA2-209ENST00000539662 ACRP10323 421 aa12.2□□□□□ -0.46
HMGA2-209ENST00000539662 CSF2RAP15509 400 aa12.2□□□□□ -0.46
HMGA2-209ENST00000539662 TCF7P36402 384 aaPredicted RBP12.2□□□□□ -0.46
HMGA2-209ENST00000539662 ZNF76P36508 570 aa12.2□□□□□ -0.46
HMGA2-209ENST00000539662 FXR1P51114 621 aaKnown RBP eCLIP12.2□□□□□ -0.46
HMGA2-209ENST00000539662 NR5A1Q13285 461 aa12.2□□□□□ -0.46
HMGA2-209ENST00000539662 SHHQ15465 462 aa12.2□□□□□ -0.46
HMGA2-209ENST00000539662 TBCKQ8TEA7 893 aa12.2□□□□□ -0.46
HMGA2-209ENST00000539662 ZBTB10Q96DT7 871 aa12.2□□□□□ -0.46
HMGA2-209ENST00000539662 SCLYQ96I15 445 aa12.2□□□□□ -0.46
HMGA2-209ENST00000539662 LBHD1Q9BQE6 289 aaPredicted RBP12.2□□□□□ -0.46
HMGA2-209ENST00000539662 RNPEPQ9H4A4 650 aa12.2□□□□□ -0.46
HMGA2-209ENST00000539662 H3BRB1 525 aa12.19□□□□□ -0.46
HMGA2-209ENST00000539662 WNT7AO00755 349 aa12.19□□□□□ -0.46
HMGA2-209ENST00000539662 CIITAP33076 1130 aa12.19□□□□□ -0.46
HMGA2-209ENST00000539662 GUCY1B3Q02153 619 aa12.19□□□□□ -0.46
HMGA2-209ENST00000539662 RABEP1Q15276 862 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms