RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 C10orf76Q5T2E6 689 aa19.33■□□□□ 0.69
RAB40C-205ENST00000539661 PAXIP1Q6ZW49 1069 aaPredicted RBP19.33■□□□□ 0.69
RAB40C-205ENST00000539661 PTF1AQ7RTS3 328 aa19.33■□□□□ 0.69
RAB40C-205ENST00000539661 STAG2Q8N3U4 1231 aa19.33■□□□□ 0.69
RAB40C-205ENST00000539661 ZNF384Q8TF68 577 aa19.33■□□□□ 0.69
RAB40C-205ENST00000539661 SCFD2Q8WU76 684 aa19.33■□□□□ 0.69
RAB40C-205ENST00000539661 LRRC27Q9C0I9 530 aa19.33■□□□□ 0.69
RAB40C-205ENST00000539661 VEZTQ9HBM0 779 aa19.33■□□□□ 0.69
RAB40C-205ENST00000539661 MAD2L2Q9UI95 211 aa19.33■□□□□ 0.69
RAB40C-205ENST00000539661 ODF2LQ9ULJ1 636 aa19.33■□□□□ 0.69
RAB40C-205ENST00000539661 KCNQ2O43526 872 aa19.33■□□□□ 0.68
RAB40C-205ENST00000539661 TLR2O60603 784 aa19.33■□□□□ 0.68
RAB40C-205ENST00000539661 GHRP10912 638 aa19.33■□□□□ 0.68
RAB40C-205ENST00000539661 PARP10Q53GL7 1025 aa19.33■□□□□ 0.68
RAB40C-205ENST00000539661 FAM83BQ5T0W9 1011 aa19.33■□□□□ 0.68
RAB40C-205ENST00000539661 HEATR3Q7Z4Q2 680 aa19.33■□□□□ 0.68
RAB40C-205ENST00000539661 CACNA2D3Q8IZS8 1091 aa19.33■□□□□ 0.68
RAB40C-205ENST00000539661 ACTRT1Q8TDG2 376 aa19.33■□□□□ 0.68
RAB40C-205ENST00000539661 SEC16BQ96JE7 1060 aa19.33■□□□□ 0.68
RAB40C-205ENST00000539661 LZTS2Q9BRK4 669 aa19.33■□□□□ 0.68
RAB40C-205ENST00000539661 ZMYND12Q9H0C1 365 aa19.33■□□□□ 0.68
RAB40C-205ENST00000539661 SCN7AQ01118 1682 aa19.33■□□□□ 0.68
RAB40C-205ENST00000539661 CCNT1O60563 726 aaKnown RBP19.32■□□□□ 0.68
RAB40C-205ENST00000539661 CTNNA1P35221 906 aaKnown RBP19.32■□□□□ 0.68
RAB40C-205ENST00000539661 XRCC4Q13426 336 aa19.32■□□□□ 0.68
RAB40C-205ENST00000539661 TRADDQ15628 312 aa19.32■□□□□ 0.68
RAB40C-205ENST00000539661 UAP1Q16222 522 aaPredicted RBP19.32■□□□□ 0.68
RAB40C-205ENST00000539661 CAVIN4Q5BKX8 364 aa19.32■□□□□ 0.68
RAB40C-205ENST00000539661 TMC4Q7Z404 712 aa19.32■□□□□ 0.68
RAB40C-205ENST00000539661 CENPHQ9H3R5 247 aa19.32■□□□□ 0.68
RAB40C-205ENST00000539661 MYMKA6NI61 221 aa19.32■□□□□ 0.68
RAB40C-205ENST00000539661 SLC8A1P32418 973 aa19.32■□□□□ 0.68
RAB40C-205ENST00000539661 GYG1P46976 350 aa19.32■□□□□ 0.68
RAB40C-205ENST00000539661 RPS6KA1Q15418 735 aa19.32■□□□□ 0.68
RAB40C-205ENST00000539661 KLHL7Q8IXQ5 586 aa19.32■□□□□ 0.68
RAB40C-205ENST00000539661 NOL4O94818 638 aa19.31■□□□□ 0.68
RAB40C-205ENST00000539661 EZRP15311 586 aaKnown RBP19.31■□□□□ 0.68
RAB40C-205ENST00000539661 TECP42680 631 aa19.31■□□□□ 0.68
RAB40C-205ENST00000539661 IFI16Q16666 785 aaKnown RBP19.31■□□□□ 0.68
RAB40C-205ENST00000539661 NEK8Q86SG6 692 aa19.31■□□□□ 0.68
RAB40C-205ENST00000539661 NSUN4Q96CB9 384 aaKnown RBP19.31■□□□□ 0.68
RAB40C-205ENST00000539661 TANGO6Q9C0B7 1094 aa19.31■□□□□ 0.68
RAB40C-205ENST00000539661 KDM4CQ9H3R0 1056 aa19.31■□□□□ 0.68
RAB40C-205ENST00000539661 BLOC1S4Q9NUP1 217 aa19.31■□□□□ 0.68
RAB40C-205ENST00000539661 LEMD3Q9Y2U8 911 aa19.31■□□□□ 0.68
RAB40C-205ENST00000539661 COL4A3BPQ9Y5P4 624 aa19.31■□□□□ 0.68
RAB40C-205ENST00000539661 DNM1LO00429 736 aa19.31■□□□□ 0.68
RAB40C-205ENST00000539661 CLGNO14967 610 aa19.31■□□□□ 0.68
RAB40C-205ENST00000539661 DNAJC8O75937 253 aaPredicted RBP19.31■□□□□ 0.68
RAB40C-205ENST00000539661 KIAA0753Q2KHM9 967 aa19.31■□□□□ 0.68
RAB40C-205ENST00000539661 LETM2Q2VYF4 491 aa19.31■□□□□ 0.68
RAB40C-205ENST00000539661 NBPF9Q3BBW0 867 aa19.31■□□□□ 0.68
RAB40C-205ENST00000539661 TBC1D5Q92609 795 aa19.31■□□□□ 0.68
RAB40C-205ENST00000539661 TATDN2Q93075 761 aa19.31■□□□□ 0.68
RAB40C-205ENST00000539661 NLRC4Q9NPP4 1024 aa19.31■□□□□ 0.68
RAB40C-205ENST00000539661 AIPL1Q9NZN9 384 aa19.31■□□□□ 0.68
RAB40C-205ENST00000539661 SWAP70Q9UH65 585 aa19.31■□□□□ 0.68
RAB40C-205ENST00000539661 PHLPP1O60346 1717 aa19.3■□□□□ 0.68
RAB40C-205ENST00000539661 CCDC188H7C350 402 aa19.3■□□□□ 0.68
RAB40C-205ENST00000539661 USP11P51784 963 aa19.3■□□□□ 0.68
RAB40C-205ENST00000539661 ATP2B2Q01814 1243 aa19.3■□□□□ 0.68
RAB40C-205ENST00000539661 GRB10Q13322 594 aa19.3■□□□□ 0.68
RAB40C-205ENST00000539661 GKAP1Q5VSY0 366 aaPredicted RBP19.3■□□□□ 0.68
RAB40C-205ENST00000539661 LARP4BQ92615 738 aaKnown RBP19.3■□□□□ 0.68
RAB40C-205ENST00000539661 N4BP2L2Q92802 583 aaPredicted RBP19.3■□□□□ 0.68
RAB40C-205ENST00000539661 CNOT10Q9H9A5 744 aaKnown RBP19.3■□□□□ 0.68
RAB40C-205ENST00000539661 ATAD5Q96QE3 1844 aa19.3■□□□□ 0.68
RAB40C-205ENST00000539661 SCTRP47872 440 aa19.3■□□□□ 0.68
RAB40C-205ENST00000539661 FKBP3Q00688 224 aaKnown RBP19.3■□□□□ 0.68
RAB40C-205ENST00000539661 EVX2Q03828 476 aa19.3■□□□□ 0.68
RAB40C-205ENST00000539661 BCL9O00512 1426 aa19.3■□□□□ 0.68
RAB40C-205ENST00000539661 KIF4AO95239 1232 aa19.29■□□□□ 0.68
RAB40C-205ENST00000539661 GNA14O95837 355 aa19.29■□□□□ 0.68
RAB40C-205ENST00000539661 GCFC2P16383 781 aaKnown RBP19.29■□□□□ 0.68
RAB40C-205ENST00000539661 GNA11P29992 359 aa19.29■□□□□ 0.68
RAB40C-205ENST00000539661 DNA2P51530 1060 aa19.29■□□□□ 0.68
RAB40C-205ENST00000539661 SPDYCQ5MJ68 293 aa19.29■□□□□ 0.68
RAB40C-205ENST00000539661 RAPGEF5Q92565 580 aa19.29■□□□□ 0.68
RAB40C-205ENST00000539661 MIEF2Q96C03 454 aa19.29■□□□□ 0.68
RAB40C-205ENST00000539661 CEP63Q96MT8 703 aa19.29■□□□□ 0.68
RAB40C-205ENST00000539661 IL17RBQ9NRM6 502 aa19.29■□□□□ 0.68
RAB40C-205ENST00000539661 CCDC88AQ3V6T2 1871 aa19.29■□□□□ 0.68
RAB40C-205ENST00000539661 WTIPA6NIX2 430 aaPredicted RBP19.29■□□□□ 0.68
RAB40C-205ENST00000539661 KCNK3O14649 394 aa19.29■□□□□ 0.68
RAB40C-205ENST00000539661 CYTH3O43739 400 aa19.29■□□□□ 0.68
RAB40C-205ENST00000539661 TFAP4Q01664 338 aa19.29■□□□□ 0.68
RAB40C-205ENST00000539661 QPCTQ16769 361 aa19.29■□□□□ 0.68
RAB40C-205ENST00000539661 SLC35G1Q2M3R5 365 aa19.29■□□□□ 0.68
RAB40C-205ENST00000539661 ODF2Q5BJF6 829 aa19.29■□□□□ 0.68
RAB40C-205ENST00000539661 CENPTQ96BT3 561 aa19.29■□□□□ 0.68
RAB40C-205ENST00000539661 LSM14BQ9BX40 385 aaKnown RBP19.29■□□□□ 0.68
RAB40C-205ENST00000539661 C6orf50Q9HD87 102 aa19.29■□□□□ 0.68
RAB40C-205ENST00000539661 PACSIN2Q9UNF0 486 aaPredicted RBP19.29■□□□□ 0.68
RAB40C-205ENST00000539661 ATP8B3O60423 1300 aa19.28■□□□□ 0.68
RAB40C-205ENST00000539661 A0A087X0T9 212 aa19.28■□□□□ 0.68
RAB40C-205ENST00000539661 ZPR1O75312 459 aa19.28■□□□□ 0.68
RAB40C-205ENST00000539661 FAM228BP0C875 321 aa19.28■□□□□ 0.68
RAB40C-205ENST00000539661 CYP2D6P10635 497 aa19.28■□□□□ 0.68
RAB40C-205ENST00000539661 FXR2P51116 673 aaKnown RBP eCLIP19.28■□□□□ 0.68
RAB40C-205ENST00000539661 POLR2FP61218 127 aaKnown RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms