RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 PABPC4Q13310 644 aaKnown RBP eCLIP15.56■□□□□ 0.08
UBE3B-210ENST00000539599 TUBB2AQ13885 445 aa15.56■□□□□ 0.08
UBE3B-210ENST00000539599 WDR93Q6P2C0 686 aa15.56■□□□□ 0.08
UBE3B-210ENST00000539599 PDXDC1Q6P996 788 aa15.56■□□□□ 0.08
UBE3B-210ENST00000539599 SCFD1Q8WVM8 642 aa15.56■□□□□ 0.08
UBE3B-210ENST00000539599 TUBB2BQ9BVA1 445 aa15.56■□□□□ 0.08
UBE3B-210ENST00000539599 ESYT3A0FGR9 886 aa15.56■□□□□ 0.08
UBE3B-210ENST00000539599 SFI1A8K8P3 1242 aa15.56■□□□□ 0.08
UBE3B-210ENST00000539599 G3V3G9 751 aa15.56■□□□□ 0.08
UBE3B-210ENST00000539599 RNF40O75150 1001 aa15.56■□□□□ 0.08
UBE3B-210ENST00000539599 ZCWPW2Q504Y3 356 aa15.56■□□□□ 0.08
UBE3B-210ENST00000539599 ARSHQ5FYA8 562 aa15.56■□□□□ 0.08
UBE3B-210ENST00000539599 DCAF8Q5TAQ9 597 aa15.56■□□□□ 0.08
UBE3B-210ENST00000539599 SLF2Q8IX21 1173 aa15.56■□□□□ 0.08
UBE3B-210ENST00000539599 HPCAL4Q9UM19 191 aa15.56■□□□□ 0.08
UBE3B-210ENST00000539599 ZC3H4Q9UPT8 1303 aaKnown RBP15.55■□□□□ 0.08
UBE3B-210ENST00000539599 A0A1W2PQJ5 194 aa15.55■□□□□ 0.08
UBE3B-210ENST00000539599 GGCXP38435 758 aa15.55■□□□□ 0.08
UBE3B-210ENST00000539599 KCNA1Q09470 495 aa15.55■□□□□ 0.08
UBE3B-210ENST00000539599 RAPGEF1Q13905 1077 aa15.55■□□□□ 0.08
UBE3B-210ENST00000539599 CDC37Q16543 378 aaPredicted RBP15.55■□□□□ 0.08
UBE3B-210ENST00000539599 SH3BP5LQ7L8J4 393 aa15.55■□□□□ 0.08
UBE3B-210ENST00000539599 FAM133AQ8N9E0 248 aa15.55■□□□□ 0.08
UBE3B-210ENST00000539599 OSBPL9Q96SU4 736 aa15.55■□□□□ 0.08
UBE3B-210ENST00000539599 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.55■□□□□ 0.08
UBE3B-210ENST00000539599 SELENOOQ9BVL4 669 aa15.55■□□□□ 0.08
UBE3B-210ENST00000539599 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.55■□□□□ 0.08
UBE3B-210ENST00000539599 COL4A3BPQ9Y5P4 624 aa15.55■□□□□ 0.08
UBE3B-210ENST00000539599 ARFGEF1Q9Y6D6 1849 aa15.55■□□□□ 0.08
UBE3B-210ENST00000539599 KRT18P05783 430 aaKnown RBP15.55■□□□□ 0.08
UBE3B-210ENST00000539599 IKQ13123 557 aaPredicted RBP15.55■□□□□ 0.08
UBE3B-210ENST00000539599 MAPK8IP2Q13387 824 aaPredicted RBP15.55■□□□□ 0.08
UBE3B-210ENST00000539599 PDIA5Q14554 519 aa15.55■□□□□ 0.08
UBE3B-210ENST00000539599 FAM83BQ5T0W9 1011 aa15.55■□□□□ 0.08
UBE3B-210ENST00000539599 PROM2Q8N271 834 aa15.55■□□□□ 0.08
UBE3B-210ENST00000539599 ANO3Q9BYT9 981 aa15.55■□□□□ 0.08
UBE3B-210ENST00000539599 RAB34Q9BZG1 259 aa15.55■□□□□ 0.08
UBE3B-210ENST00000539599 MYH4Q9Y623 1939 aa15.55■□□□□ 0.08
UBE3B-210ENST00000539599 PCNTO95613 3336 aa15.55■□□□□ 0.08
UBE3B-210ENST00000539599 AFF2P51816 1311 aa15.55■□□□□ 0.08
UBE3B-210ENST00000539599 ZBTB39O15060 712 aa15.54■□□□□ 0.08
UBE3B-210ENST00000539599 CYP11B2P19099 503 aa15.54■□□□□ 0.08
UBE3B-210ENST00000539599 SMARCA1P28370 1054 aa15.54■□□□□ 0.08
UBE3B-210ENST00000539599 UBXN2AP68543 259 aa15.54■□□□□ 0.08
UBE3B-210ENST00000539599 FIGNQ5HY92 759 aa15.54■□□□□ 0.08
UBE3B-210ENST00000539599 PPP4R3AQ6IN85 833 aa15.54■□□□□ 0.08
UBE3B-210ENST00000539599 SIAH1Q8IUQ4 282 aa15.54■□□□□ 0.08
UBE3B-210ENST00000539599 TBC1D5Q92609 795 aa15.54■□□□□ 0.08
UBE3B-210ENST00000539599 PLIN4Q96Q06 1357 aa15.54■□□□□ 0.08
UBE3B-210ENST00000539599 UBR3Q6ZT12 1888 aa15.54■□□□□ 0.08
UBE3B-210ENST00000539599 EIF3JO75822 258 aaKnown RBP15.54■□□□□ 0.08
UBE3B-210ENST00000539599 HOXA10P31260 410 aaPredicted RBP15.54■□□□□ 0.08
UBE3B-210ENST00000539599 CRKP46108 304 aa15.54■□□□□ 0.08
UBE3B-210ENST00000539599 TRADDQ15628 312 aa15.54■□□□□ 0.08
UBE3B-210ENST00000539599 SPATA4Q8NEY3 305 aa15.54■□□□□ 0.08
UBE3B-210ENST00000539599 TSG101Q99816 390 aa15.54■□□□□ 0.08
UBE3B-210ENST00000539599 TLR10Q9BXR5 811 aa15.54■□□□□ 0.08
UBE3B-210ENST00000539599 RBM12Q9NTZ6 932 aaKnown RBP15.54■□□□□ 0.08
UBE3B-210ENST00000539599 PCDHA2Q9Y5H9 948 aa15.54■□□□□ 0.08
UBE3B-210ENST00000539599 AGPSO00116 658 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 TACC1O75410 805 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 PRPF6O94906 941 aaKnown RBP15.53■□□□□ 0.08
UBE3B-210ENST00000539599 MRPL12P52815 198 aaKnown RBP15.53■□□□□ 0.08
UBE3B-210ENST00000539599 LRRC63Q05C16 580 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 ASTE1Q2TB18 679 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-210ENST00000539599 HSP90B2PQ58FF3 399 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 TTC19Q6DKK2 380 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-210ENST00000539599 SND1Q7KZF4 910 aaKnown RBP eCLIP15.53■□□□□ 0.08
UBE3B-210ENST00000539599 KSR1Q8IVT5 923 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 TXLNBQ8N3L3 684 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 EXOC4Q96A65 974 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 COA1Q9GZY4 146 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 EHD4Q9H223 541 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 ADAMTS1Q9UHI8 967 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 ATF5Q9Y2D1 282 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-210ENST00000539599 ATP6V0A2Q9Y487 856 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 A0A087X0T9 212 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 FAM86B1E9PN63 330 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 MEIS2O14770 477 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 USO1O60763 962 aaKnown RBP15.53■□□□□ 0.08
UBE3B-210ENST00000539599 FAM86B2P0C5J1 330 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 FAM228BP0C875 321 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 MYBP10242 640 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 SLC9A1P19634 815 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 KLRC1P26715 233 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 FKBP3Q00688 224 aaKnown RBP15.53■□□□□ 0.08
UBE3B-210ENST00000539599 KLHDC7AQ5VTJ3 777 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 SLFN13Q68D06 897 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 GJB7Q6PEY0 223 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 CCNI2Q6ZMN8 369 aaPredicted RBP15.53■□□□□ 0.08
UBE3B-210ENST00000539599 CATSPER3Q86XQ3 398 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 EHBP1Q8NDI1 1231 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 ZNF622Q969S3 477 aaKnown RBP eCLIP15.53■□□□□ 0.08
UBE3B-210ENST00000539599 CALCOCO1Q9P1Z2 691 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 BCS1LQ9Y276 419 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 JRKLQ9Y4A0 524 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 THSD7AQ9UPZ6 1657 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 TRIM66O15016 1216 aa15.53■□□□□ 0.08
UBE3B-210ENST00000539599 HNRNPH3P31942 346 aaKnown RBP15.53■□□□□ 0.08
UBE3B-210ENST00000539599 ADAM9Q13443 819 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms