RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 LCMT1Q9UIC8 334 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 INO80B-WBP1J3KQ70 363 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 EPHB4P54760 987 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 SGO2Q562F6 1265 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 ADAT2Q7Z6V5 191 aaKnown RBP7.03□□□□□ -1.28
LSAMP-207ENST00000539563 DCAF4Q8WV16 495 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 INO80BQ9C086 356 aaPredicted RBP7.03□□□□□ -1.28
LSAMP-207ENST00000539563 RPF1Q9H9Y2 349 aaKnown RBP7.03□□□□□ -1.28
LSAMP-207ENST00000539563 INTS9Q9NV88 658 aaKnown RBP7.03□□□□□ -1.28
LSAMP-207ENST00000539563 GCNT4Q9P109 453 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 FAM8A1Q9UBU6 413 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 PTPN22Q9Y2R2 807 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 NUB1Q9Y5A7 615 aa7.03□□□□□ -1.28
LSAMP-207ENST00000539563 CLRN2A0PK11 232 aa7.02□□□□□ -1.28
LSAMP-207ENST00000539563 SORBS3O60504 671 aa7.02□□□□□ -1.28
LSAMP-207ENST00000539563 KRT10P13645 584 aa7.02□□□□□ -1.28
LSAMP-207ENST00000539563 CASP14P31944 242 aa7.02□□□□□ -1.28
LSAMP-207ENST00000539563 GRAPQ13588 217 aa7.02□□□□□ -1.28
LSAMP-207ENST00000539563 LINC00301Q8NCQ3 95 aa7.02□□□□□ -1.28
LSAMP-207ENST00000539563 GRAPLQ8TC17 118 aaPredicted RBP7.02□□□□□ -1.28
LSAMP-207ENST00000539563 STAG1Q8WVM7 1258 aa7.02□□□□□ -1.28
LSAMP-207ENST00000539563 TCP11Q8WWU5 503 aa7.02□□□□□ -1.28
LSAMP-207ENST00000539563 ZBTB1Q9Y2K1 713 aa7.02□□□□□ -1.28
LSAMP-207ENST00000539563 CPP00450 1065 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 KIF23Q02241 960 aaPredicted RBP7.02□□□□□ -1.29
LSAMP-207ENST00000539563 PROSER3Q2NL68 480 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 ZNF589Q86UQ0 364 aaPredicted RBP7.02□□□□□ -1.29
LSAMP-207ENST00000539563 EFCAB13Q8IY85 973 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 LRGUKQ96M69 825 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 TLR7Q9NYK1 1049 aaKnown RBP7.02□□□□□ -1.29
LSAMP-207ENST00000539563 PLEKHG2Q9H7P9 1386 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 POC1B-GALNT4F8VUJ3 575 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 TTC4O95801 387 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 RXRBP28702 533 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 ABCC3O15438 1527 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 PGRMC1O00264 195 aaKnown RBP7.02□□□□□ -1.29
LSAMP-207ENST00000539563 IREB2P48200 963 aaKnown RBP7.02□□□□□ -1.29
LSAMP-207ENST00000539563 IFRD2Q12894 506 aaPredicted RBP7.02□□□□□ -1.29
LSAMP-207ENST00000539563 RABEP2Q9H5N1 569 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 LRRC4Q9HBW1 653 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 LRFN2Q9ULH4 789 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 UNC13BO14795 1591 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 STK36Q9NRP7 1315 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 ORC2Q13416 577 aaPredicted RBP7.02□□□□□ -1.29
LSAMP-207ENST00000539563 TMEM179Q6ZVK1 233 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 SRRM1Q8IYB3 904 aaKnown RBP7.02□□□□□ -1.29
LSAMP-207ENST00000539563 KCTD6Q8NC69 237 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 PLA2R1Q13018 1463 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 ARL4AP40617 200 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 MECOMQ03112 1051 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 DNAJC24Q6P3W2 148 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 BCAS4Q8TDM0 211 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.02□□□□□ -1.29
LSAMP-207ENST00000539563 HDAC11Q96DB2 347 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 GBP5Q96PP8 586 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 CDK8P49336 464 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 SPICE1Q8N0Z3 855 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 NLRP7Q8WX94 980 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 PLEKHA4Q9H4M7 779 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 UBE2TQ9NPD8 197 aaPredicted RBP7.02□□□□□ -1.29
LSAMP-207ENST00000539563 EMILIN3Q9NT22 766 aa7.02□□□□□ -1.29
LSAMP-207ENST00000539563 ESYT2A0FGR8 921 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 LUC7L3O95232 432 aaKnown RBP7.01□□□□□ -1.29
LSAMP-207ENST00000539563 PTPN12Q05209 780 aaKnown RBP7.01□□□□□ -1.29
LSAMP-207ENST00000539563 SEMA3FQ13275 785 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 USP17L2Q6R6M4 530 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 ARHGEF18Q6ZSZ5 1173 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 APOL6Q9BWW8 343 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 CAPN7Q9Y6W3 813 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 WDR19Q8NEZ3 1342 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 MYO3BQ8WXR4 1341 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 TTI1O43156 1089 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 PLCG1P19174 1290 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 CIITAP33076 1130 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 MSH2P43246 934 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 ATP1A2P50993 1020 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 COG7P83436 770 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 ZBED6P86452 979 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 AP3B2Q13367 1082 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 RBBP5Q15291 538 aaKnown RBP7.01□□□□□ -1.29
LSAMP-207ENST00000539563 RC3H1Q5TC82 1133 aaKnown RBP7.01□□□□□ -1.29
LSAMP-207ENST00000539563 PDXDC2PQ6P474 469 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 ARMCX2Q7L311 632 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 LCORLQ8N3X6 602 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 A2ML1A8K2U0 1454 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 BAG2O95816 211 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 CCNE1P24864 410 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 C4orf50Q6ZRC1 276 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 KRT27Q7Z3Y8 459 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 CNOT10Q9H9A5 744 aaKnown RBP7.01□□□□□ -1.29
LSAMP-207ENST00000539563 KIAA1586Q9HCI6 787 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 MID2Q9UJV3 735 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 PCDHA13Q9Y5I0 950 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 SART1O43290 800 aaKnown RBP7.01□□□□□ -1.29
LSAMP-207ENST00000539563 GNAT1P11488 350 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 XPAP23025 273 aaPredicted RBP7.01□□□□□ -1.29
LSAMP-207ENST00000539563 YWHAGP61981 247 aaKnown RBP eCLIP7.01□□□□□ -1.29
LSAMP-207ENST00000539563 ALS2CLQ60I27 953 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 PCGF5Q86SE9 256 aa7.01□□□□□ -1.29
LSAMP-207ENST00000539563 UNC5CLQ8IV45 518 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms