RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 WNT8BQ93098 351 aa21.89■■□□□ 1.09
TNFRSF1A-212ENST00000539372 GPR20Q99678 358 aa21.89■■□□□ 1.09
TNFRSF1A-212ENST00000539372 FAM217BQ9NTX9 383 aaPredicted RBP21.89■■□□□ 1.09
TNFRSF1A-212ENST00000539372 PCDHA6Q9UN73 950 aa21.89■■□□□ 1.09
TNFRSF1A-212ENST00000539372 PCDHA8Q9Y5H6 950 aa21.89■■□□□ 1.09
TNFRSF1A-212ENST00000539372 H3BRB1 525 aa21.88■■□□□ 1.09
TNFRSF1A-212ENST00000539372 NAPAP54920 295 aa21.88■■□□□ 1.09
TNFRSF1A-212ENST00000539372 APOBRQ0VD83 1088 aa21.88■■□□□ 1.09
TNFRSF1A-212ENST00000539372 PTK7Q13308 1070 aa21.88■■□□□ 1.09
TNFRSF1A-212ENST00000539372 UTP14CQ5TAP6 766 aaKnown RBP21.88■■□□□ 1.09
TNFRSF1A-212ENST00000539372 TYW1BQ6NUM6 668 aa21.88■■□□□ 1.09
TNFRSF1A-212ENST00000539372 Q6ZUG5 572 aa21.88■■□□□ 1.09
TNFRSF1A-212ENST00000539372 TUT1Q9H6E5 874 aaKnown RBP21.88■■□□□ 1.09
TNFRSF1A-212ENST00000539372 PKD2L1Q9P0L9 805 aa21.88■■□□□ 1.09
TNFRSF1A-212ENST00000539372 TRIP12Q14669 1992 aaPredicted RBP21.88■■□□□ 1.09
TNFRSF1A-212ENST00000539372 SMIM10L2AP0DMW4 78 aa21.87■■□□□ 1.09
TNFRSF1A-212ENST00000539372 SMIM10L2BP0DMW5 78 aa21.87■■□□□ 1.09
TNFRSF1A-212ENST00000539372 ITGB5P18084 799 aa21.87■■□□□ 1.09
TNFRSF1A-212ENST00000539372 GPNMBQ14956 572 aa21.87■■□□□ 1.09
TNFRSF1A-212ENST00000539372 TRIM71Q2Q1W2 868 aaKnown RBP21.87■■□□□ 1.09
TNFRSF1A-212ENST00000539372 TRIM50Q86XT4 487 aa21.87■■□□□ 1.09
TNFRSF1A-212ENST00000539372 SENP7Q9BQF6 1050 aa21.87■■□□□ 1.09
TNFRSF1A-212ENST00000539372 USP26Q9BXU7 913 aa21.87■■□□□ 1.09
TNFRSF1A-212ENST00000539372 PRDM12Q9H4Q4 367 aa21.87■■□□□ 1.09
TNFRSF1A-212ENST00000539372 DOCK5Q9H7D0 1870 aa21.87■■□□□ 1.09
TNFRSF1A-212ENST00000539372 EYSQ5T1H1 3165 aa21.87■■□□□ 1.09
TNFRSF1A-212ENST00000539372 C17orf102A2RUQ5 167 aa21.86■■□□□ 1.09
TNFRSF1A-212ENST00000539372 ATP9AO75110 1047 aa21.86■■□□□ 1.09
TNFRSF1A-212ENST00000539372 REC8O95072 547 aa21.86■■□□□ 1.09
TNFRSF1A-212ENST00000539372 METAP2P50579 478 aaKnown RBP eCLIP21.86■■□□□ 1.09
TNFRSF1A-212ENST00000539372 RBL2Q08999 1139 aa21.86■■□□□ 1.09
TNFRSF1A-212ENST00000539372 ZNF618Q5T7W0 954 aa21.86■■□□□ 1.09
TNFRSF1A-212ENST00000539372 BLOC1S2Q6QNY1 142 aa21.86■■□□□ 1.09
TNFRSF1A-212ENST00000539372 BRF1Q92994 677 aa21.86■■□□□ 1.09
TNFRSF1A-212ENST00000539372 GPRASP2Q96D09 838 aa21.86■■□□□ 1.09
TNFRSF1A-212ENST00000539372 PGBD1Q96JS3 809 aa21.86■■□□□ 1.09
TNFRSF1A-212ENST00000539372 SLC28A3Q9HAS3 691 aa21.86■■□□□ 1.09
TNFRSF1A-212ENST00000539372 UBIAD1Q9Y5Z9 338 aa21.86■■□□□ 1.09
TNFRSF1A-212ENST00000539372 GBF1Q92538 1859 aa21.86■■□□□ 1.09
TNFRSF1A-212ENST00000539372 STXBP3O00186 592 aa21.85■■□□□ 1.09
TNFRSF1A-212ENST00000539372 NBNO60934 754 aa21.85■■□□□ 1.09
TNFRSF1A-212ENST00000539372 KCNA2P16389 499 aa21.85■■□□□ 1.09
TNFRSF1A-212ENST00000539372 ADD1P35611 737 aaKnown RBP21.85■■□□□ 1.09
TNFRSF1A-212ENST00000539372 ADCY7P51828 1080 aa21.85■■□□□ 1.09
TNFRSF1A-212ENST00000539372 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.85■■□□□ 1.09
TNFRSF1A-212ENST00000539372 ATP6V0A1Q93050 837 aa21.85■■□□□ 1.09
TNFRSF1A-212ENST00000539372 EHMT1Q9H9B1 1298 aa21.85■■□□□ 1.09
TNFRSF1A-212ENST00000539372 RIC8AQ9NPQ8 531 aa21.85■■□□□ 1.09
TNFRSF1A-212ENST00000539372 PCDHA11Q9Y5I1 949 aa21.85■■□□□ 1.09
TNFRSF1A-212ENST00000539372 RPS6KB1P23443 525 aa21.84■■□□□ 1.09
TNFRSF1A-212ENST00000539372 THPOP40225 353 aa21.84■■□□□ 1.09
TNFRSF1A-212ENST00000539372 RCAN1P53805 252 aa21.84■■□□□ 1.09
TNFRSF1A-212ENST00000539372 MTMR1Q13613 665 aa21.84■■□□□ 1.09
TNFRSF1A-212ENST00000539372 PPP2R2DQ66LE6 453 aa21.84■■□□□ 1.09
TNFRSF1A-212ENST00000539372 PPP1R18Q6NYC8 613 aa21.84■■□□□ 1.09
TNFRSF1A-212ENST00000539372 TRAF7Q6Q0C0 670 aa21.84■■□□□ 1.09
TNFRSF1A-212ENST00000539372 SERINC5Q86VE9 423 aa21.84■■□□□ 1.09
TNFRSF1A-212ENST00000539372 GIMAP8Q8ND71 665 aaPredicted RBP21.84■■□□□ 1.09
TNFRSF1A-212ENST00000539372 TET1Q8NFU7 2136 aa21.84■■□□□ 1.09
TNFRSF1A-212ENST00000539372 CDHR1Q96JP9 859 aa21.84■■□□□ 1.09
TNFRSF1A-212ENST00000539372 RNPEPQ9H4A4 650 aa21.84■■□□□ 1.09
TNFRSF1A-212ENST00000539372 SMCO2A6NFE2 343 aa21.83■■□□□ 1.09
TNFRSF1A-212ENST00000539372 DLL1O00548 723 aa21.83■■□□□ 1.09
TNFRSF1A-212ENST00000539372 TREHO43280 583 aa21.83■■□□□ 1.09
TNFRSF1A-212ENST00000539372 TCTN1Q2MV58 587 aa21.83■■□□□ 1.09
TNFRSF1A-212ENST00000539372 SLC9A7Q96T83 725 aa21.83■■□□□ 1.09
TNFRSF1A-212ENST00000539372 GAS2L1Q99501 681 aaPredicted RBP21.83■■□□□ 1.09
TNFRSF1A-212ENST00000539372 JADE2Q9NQC1 790 aa21.83■■□□□ 1.09
TNFRSF1A-212ENST00000539372 SETD4Q9NVD3 440 aa21.83■■□□□ 1.09
TNFRSF1A-212ENST00000539372 TMEM260Q9NX78 707 aa21.83■■□□□ 1.09
TNFRSF1A-212ENST00000539372 BARHL2Q9NY43 387 aa21.83■■□□□ 1.09
TNFRSF1A-212ENST00000539372 ZNF215Q9UL58 517 aaPredicted RBP21.83■■□□□ 1.09
TNFRSF1A-212ENST00000539372 BAIAP3O94812 1187 aa21.82■■□□□ 1.08
TNFRSF1A-212ENST00000539372 PARNO95453 639 aaKnown RBP21.82■■□□□ 1.08
TNFRSF1A-212ENST00000539372 CXCL10P02778 98 aa21.82■■□□□ 1.08
TNFRSF1A-212ENST00000539372 HOXC8P31273 242 aa21.82■■□□□ 1.08
TNFRSF1A-212ENST00000539372 TCF7P36402 384 aaPredicted RBP21.82■■□□□ 1.08
TNFRSF1A-212ENST00000539372 MBTPS1Q14703 1052 aa21.82■■□□□ 1.08
TNFRSF1A-212ENST00000539372 CNKSR3Q6P9H4 555 aa21.82■■□□□ 1.08
TNFRSF1A-212ENST00000539372 CYP2W1Q8TAV3 490 aa21.82■■□□□ 1.08
TNFRSF1A-212ENST00000539372 PHOSPHO2Q8TCD6 241 aa21.82■■□□□ 1.08
TNFRSF1A-212ENST00000539372 CCDC196A0A1B0GTZ2 297 aa21.81■■□□□ 1.08
TNFRSF1A-212ENST00000539372 hCG_1984214I3L0E3 225 aa21.81■■□□□ 1.08
TNFRSF1A-212ENST00000539372 CA3P07451 260 aa21.81■■□□□ 1.08
TNFRSF1A-212ENST00000539372 PSMA5P28066 241 aa21.81■■□□□ 1.08
TNFRSF1A-212ENST00000539372 KCNJ6P48051 423 aa21.81■■□□□ 1.08
TNFRSF1A-212ENST00000539372 WDR5P61964 334 aaKnown RBP21.81■■□□□ 1.08
TNFRSF1A-212ENST00000539372 TMCO2Q7Z6W1 182 aaPredicted RBP21.81■■□□□ 1.08
TNFRSF1A-212ENST00000539372 HERC6Q8IVU3 1022 aa21.81■■□□□ 1.08
TNFRSF1A-212ENST00000539372 ZNF713Q8N859 430 aaPredicted RBP21.81■■□□□ 1.08
TNFRSF1A-212ENST00000539372 USP38Q8NB14 1042 aa21.81■■□□□ 1.08
TNFRSF1A-212ENST00000539372 MXRA8Q9BRK3 442 aa21.81■■□□□ 1.08
TNFRSF1A-212ENST00000539372 ANO3Q9BYT9 981 aa21.81■■□□□ 1.08
TNFRSF1A-212ENST00000539372 UNC80Q8N2C7 3258 aa21.81■■□□□ 1.08
TNFRSF1A-212ENST00000539372 GSTTP1A0A1W2PQM5 241 aa21.8■■□□□ 1.08
TNFRSF1A-212ENST00000539372 RSPH10B2B2RC85 870 aa21.8■■□□□ 1.08
TNFRSF1A-212ENST00000539372 PPFIA3O75145 1194 aa21.8■■□□□ 1.08
TNFRSF1A-212ENST00000539372 RSPH10BP0C881 870 aa21.8■■□□□ 1.08
TNFRSF1A-212ENST00000539372 ARHGAP4P98171 946 aa21.8■■□□□ 1.08
TNFRSF1A-212ENST00000539372 ADGRE1Q14246 886 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms