RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 H3BRB1 525 aa25.5■■□□□ 1.67
SCARB1-206ENST00000539320 HMGB1P09429 215 aaKnown RBP25.5■■□□□ 1.67
SCARB1-206ENST00000539320 ZNF200P98182 395 aaPredicted RBP25.5■■□□□ 1.67
SCARB1-206ENST00000539320 PPP2R2DQ66LE6 453 aa25.5■■□□□ 1.67
SCARB1-206ENST00000539320 WWC2Q6AWC2 1192 aa25.5■■□□□ 1.67
SCARB1-206ENST00000539320 UNC80Q8N2C7 3258 aa25.5■■□□□ 1.67
SCARB1-206ENST00000539320 WNT8BQ93098 351 aa25.5■■□□□ 1.67
SCARB1-206ENST00000539320 GPRASP2Q96D09 838 aa25.5■■□□□ 1.67
SCARB1-206ENST00000539320 GPR20Q99678 358 aa25.5■■□□□ 1.67
SCARB1-206ENST00000539320 TUT1Q9H6E5 874 aaKnown RBP25.5■■□□□ 1.67
SCARB1-206ENST00000539320 EYSQ5T1H1 3165 aa25.5■■□□□ 1.67
SCARB1-206ENST00000539320 KLF18A0A0U1RQI7 1052 aa25.49■■□□□ 1.67
SCARB1-206ENST00000539320 MYOGP15173 224 aa25.49■■□□□ 1.67
SCARB1-206ENST00000539320 HIC1Q14526 733 aa25.49■■□□□ 1.67
SCARB1-206ENST00000539320 GPNMBQ14956 572 aa25.49■■□□□ 1.67
SCARB1-206ENST00000539320 PPP1R18Q6NYC8 613 aa25.49■■□□□ 1.67
SCARB1-206ENST00000539320 PHOSPHO2Q8TCD6 241 aa25.49■■□□□ 1.67
SCARB1-206ENST00000539320 CDHR1Q96JP9 859 aa25.49■■□□□ 1.67
SCARB1-206ENST00000539320 USP26Q9BXU7 913 aa25.49■■□□□ 1.67
SCARB1-206ENST00000539320 C17orf102A2RUQ5 167 aa25.48■■□□□ 1.67
SCARB1-206ENST00000539320 CXCL10P02778 98 aa25.48■■□□□ 1.67
SCARB1-206ENST00000539320 SMIM10L2AP0DMW4 78 aa25.48■■□□□ 1.67
SCARB1-206ENST00000539320 SMIM10L2BP0DMW5 78 aa25.48■■□□□ 1.67
SCARB1-206ENST00000539320 HOXC8P31273 242 aa25.48■■□□□ 1.67
SCARB1-206ENST00000539320 RCAN1P53805 252 aa25.48■■□□□ 1.67
SCARB1-206ENST00000539320 SP4Q02446 784 aa25.48■■□□□ 1.67
SCARB1-206ENST00000539320 SERINC5Q86VE9 423 aa25.48■■□□□ 1.67
SCARB1-206ENST00000539320 TRIM50Q86XT4 487 aa25.48■■□□□ 1.67
SCARB1-206ENST00000539320 GIMAP8Q8ND71 665 aaPredicted RBP25.48■■□□□ 1.67
SCARB1-206ENST00000539320 EHMT1Q9H9B1 1298 aa25.48■■□□□ 1.67
SCARB1-206ENST00000539320 ZNF215Q9UL58 517 aaPredicted RBP25.48■■□□□ 1.67
SCARB1-206ENST00000539320 NBNO60934 754 aa25.47■■□□□ 1.67
SCARB1-206ENST00000539320 KCNJ6P48051 423 aa25.47■■□□□ 1.67
SCARB1-206ENST00000539320 NAPAP54920 295 aa25.47■■□□□ 1.67
SCARB1-206ENST00000539320 FUT2Q10981 343 aa25.47■■□□□ 1.67
SCARB1-206ENST00000539320 ZNF618Q5T7W0 954 aa25.47■■□□□ 1.67
SCARB1-206ENST00000539320 CNKSR3Q6P9H4 555 aa25.47■■□□□ 1.67
SCARB1-206ENST00000539320 TRAF7Q6Q0C0 670 aa25.47■■□□□ 1.67
SCARB1-206ENST00000539320 USP38Q8NB14 1042 aa25.47■■□□□ 1.67
SCARB1-206ENST00000539320 KCNB2Q92953 911 aa25.47■■□□□ 1.67
SCARB1-206ENST00000539320 PCDHA6Q9UN73 950 aa25.47■■□□□ 1.67
SCARB1-206ENST00000539320 PCDHA8Q9Y5H6 950 aa25.47■■□□□ 1.67
SCARB1-206ENST00000539320 CHD9Q3L8U1 2897 aa25.46■■□□□ 1.67
SCARB1-206ENST00000539320 hCG_1984214I3L0E3 225 aa25.46■■□□□ 1.67
SCARB1-206ENST00000539320 ITGB5P18084 799 aa25.46■■□□□ 1.67
SCARB1-206ENST00000539320 FGD1P98174 961 aa25.46■■□□□ 1.67
SCARB1-206ENST00000539320 UTP14CQ5TAP6 766 aaKnown RBP25.46■■□□□ 1.67
SCARB1-206ENST00000539320 TYW1BQ6NUM6 668 aa25.46■■□□□ 1.67
SCARB1-206ENST00000539320 HERC6Q8IVU3 1022 aa25.46■■□□□ 1.67
SCARB1-206ENST00000539320 ZNF713Q8N859 430 aaPredicted RBP25.46■■□□□ 1.67
SCARB1-206ENST00000539320 ATP6V0A1Q93050 837 aa25.46■■□□□ 1.67
SCARB1-206ENST00000539320 NAP1L2Q9ULW6 460 aaPredicted RBP25.46■■□□□ 1.67
SCARB1-206ENST00000539320 TELO2Q9Y4R8 837 aa25.46■■□□□ 1.67
SCARB1-206ENST00000539320 UBIAD1Q9Y5Z9 338 aa25.46■■□□□ 1.67
SCARB1-206ENST00000539320 CA3P07451 260 aa25.45■■□□□ 1.66
SCARB1-206ENST00000539320 KCNA2P16389 499 aa25.45■■□□□ 1.66
SCARB1-206ENST00000539320 WDR5P61964 334 aaKnown RBP25.45■■□□□ 1.66
SCARB1-206ENST00000539320 ADGRE1Q14246 886 aa25.45■■□□□ 1.66
SCARB1-206ENST00000539320 TEX2Q8IWB9 1127 aa25.45■■□□□ 1.66
SCARB1-206ENST00000539320 JAKMIP1Q96N16 626 aaKnown RBP25.45■■□□□ 1.66
SCARB1-206ENST00000539320 PRUNE2Q8WUY3 3088 aa25.45■■□□□ 1.66
SCARB1-206ENST00000539320 CPA1P15085 419 aa25.44■■□□□ 1.66
SCARB1-206ENST00000539320 CDC27P30260 824 aa25.44■■□□□ 1.66
SCARB1-206ENST00000539320 HSPA4P34932 840 aa25.44■■□□□ 1.66
SCARB1-206ENST00000539320 THPOP40225 353 aa25.44■■□□□ 1.66
SCARB1-206ENST00000539320 MTMR1Q13613 665 aa25.44■■□□□ 1.66
SCARB1-206ENST00000539320 MBTPS1Q14703 1052 aa25.44■■□□□ 1.66
SCARB1-206ENST00000539320 RIC8AQ9NPQ8 531 aa25.44■■□□□ 1.66
SCARB1-206ENST00000539320 FAM217BQ9NTX9 383 aaPredicted RBP25.44■■□□□ 1.66
SCARB1-206ENST00000539320 SNX14Q9Y5W7 946 aa25.44■■□□□ 1.66
SCARB1-206ENST00000539320 V9GY48 417 aaPredicted RBP25.44■■□□□ 1.66
SCARB1-206ENST00000539320 PTPRSQ13332 1948 aa25.43■■□□□ 1.66
SCARB1-206ENST00000539320 EMSYQ7Z589 1322 aa25.43■■□□□ 1.66
SCARB1-206ENST00000539320 KIF28PB7ZC32 967 aa25.43■■□□□ 1.66
SCARB1-206ENST00000539320 STXBP3O00186 592 aa25.43■■□□□ 1.66
SCARB1-206ENST00000539320 ATP9AO75110 1047 aa25.43■■□□□ 1.66
SCARB1-206ENST00000539320 METAP2P50579 478 aaKnown RBP eCLIP25.43■■□□□ 1.66
SCARB1-206ENST00000539320 ADCY7P51828 1080 aa25.43■■□□□ 1.66
SCARB1-206ENST00000539320 BLOC1S2Q6QNY1 142 aa25.43■■□□□ 1.66
SCARB1-206ENST00000539320 RNPEPQ9H4A4 650 aa25.43■■□□□ 1.66
SCARB1-206ENST00000539320 JADE2Q9NQC1 790 aa25.43■■□□□ 1.66
SCARB1-206ENST00000539320 PKD2L1Q9P0L9 805 aa25.43■■□□□ 1.66
SCARB1-206ENST00000539320 CHD7Q9P2D1 2997 aa25.42■■□□□ 1.66
SCARB1-206ENST00000539320 TREHO43280 583 aa25.42■■□□□ 1.66
SCARB1-206ENST00000539320 EFCAB14O75071 495 aa25.42■■□□□ 1.66
SCARB1-206ENST00000539320 REC8O95072 547 aa25.42■■□□□ 1.66
SCARB1-206ENST00000539320 GNAT1P11488 350 aa25.42■■□□□ 1.66
SCARB1-206ENST00000539320 IGFBP4P22692 258 aa25.42■■□□□ 1.66
SCARB1-206ENST00000539320 TCF7P36402 384 aaPredicted RBP25.42■■□□□ 1.66
SCARB1-206ENST00000539320 TCTN1Q2MV58 587 aa25.42■■□□□ 1.66
SCARB1-206ENST00000539320 Q6ZUG5 572 aa25.42■■□□□ 1.66
SCARB1-206ENST00000539320 BARHL2Q9NY43 387 aa25.42■■□□□ 1.66
SCARB1-206ENST00000539320 ABHD14A-ACY1A0A1B0GW23 586 aa25.41■■□□□ 1.66
SCARB1-206ENST00000539320 RSPH10B2B2RC85 870 aa25.41■■□□□ 1.66
SCARB1-206ENST00000539320 CAND2O75155 1236 aa25.41■■□□□ 1.66
SCARB1-206ENST00000539320 LGR5O75473 907 aa25.41■■□□□ 1.66
SCARB1-206ENST00000539320 RSPH10BP0C881 870 aa25.41■■□□□ 1.66
SCARB1-206ENST00000539320 DEFB103AP81534 67 aa25.41■■□□□ 1.66
SCARB1-206ENST00000539320 APOBRQ0VD83 1088 aa25.41■■□□□ 1.66
SCARB1-206ENST00000539320 BRF1Q92994 677 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms