RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 MYH4Q9Y623 1939 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 GTPBP6O43824 516 aaPredicted RBP8.33□□□□□ -1.08
LMO3-220ENST00000539232 EDIL3O43854 480 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 ATP9AO75110 1047 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 EIF3JO75822 258 aaKnown RBP8.33□□□□□ -1.08
LMO3-220ENST00000539232 REC8O95072 547 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 ZNF286BP0CG31 522 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 CALM1P0DP23 149 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 CALM2P0DP24 149 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 CALM3P0DP25 149 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 ACRP10323 421 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 ITGB5P18084 799 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 UBA1P22314 1058 aaKnown RBP8.33□□□□□ -1.08
LMO3-220ENST00000539232 ATRXP46100 2492 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 ZNF200P98182 395 aaPredicted RBP8.33□□□□□ -1.08
LMO3-220ENST00000539232 ITGA7Q13683 1181 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 NBPF20Q3BBV1 942 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 RUFY3Q7L099 469 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 PCSK9Q8NBP7 692 aaKnown RBP8.33□□□□□ -1.08
LMO3-220ENST00000539232 WNT8BQ93098 351 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 COL26A1Q96A83 441 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 MFSD14AQ96MC6 490 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 GLT1D1Q96MS3 346 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 IWS1Q96ST2 819 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 LZTS2Q9BRK4 669 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 PPP1R12CQ9BZL4 782 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 NKX2-4Q9H2Z4 354 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 PSTPIP2Q9H939 334 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 PKD2L1Q9P0L9 805 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 Q9Y3F1 56 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 MYH8P13535 1937 aa8.33□□□□□ -1.08
LMO3-220ENST00000539232 LOC102724159A0A0B4J2E5 919 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 A0A0U1RQG5 324 aaPredicted RBP8.32□□□□□ -1.08
LMO3-220ENST00000539232 SPATA31C2B4DYI2 1134 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 PIK3CDO00329 1044 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 LARGE1O95461 756 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 GGPS1O95749 300 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 GH1P01241 217 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 MMP3P08254 477 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 GNAQP50148 359 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 METAP2P50579 478 aaKnown RBP eCLIP8.32□□□□□ -1.08
LMO3-220ENST00000539232 EVCP57679 992 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 STK3Q13188 491 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 TTLL4Q14679 1199 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 PWP2Q15269 919 aaKnown RBP8.32□□□□□ -1.08
LMO3-220ENST00000539232 HSDL1Q3SXM5 330 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 CELF3Q5SZQ8 465 aaKnown RBP8.32□□□□□ -1.08
LMO3-220ENST00000539232 MYSM1Q5VVJ2 828 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 TRIM50Q86XT4 487 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 RASGRP4Q8TDF6 673 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 TOX2Q96NM4 488 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 INPP4AQ96PE3 977 aaPredicted RBP8.32□□□□□ -1.08
LMO3-220ENST00000539232 PRRX2Q99811 253 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 NOC4LQ9BVI4 516 aaKnown RBP8.32□□□□□ -1.08
LMO3-220ENST00000539232 OSBPL7Q9BZF2 842 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 WNT8AQ9H1J5 351 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 ALDH8A1Q9H2A2 487 aaPredicted RBP8.32□□□□□ -1.08
LMO3-220ENST00000539232 SPC25Q9HBM1 224 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 GJB4Q9NTQ9 266 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 SEC63Q9UGP8 760 aaKnown RBP8.32□□□□□ -1.08
LMO3-220ENST00000539232 MTCH2Q9Y6C9 303 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 MRVI1Q9Y6F6 885 aa8.32□□□□□ -1.08
LMO3-220ENST00000539232 LCTP09848 1927 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 DCDC2CA8MYV0 355 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 DCXO43602 365 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 HMGB1P09429 215 aaKnown RBP8.31□□□□□ -1.08
LMO3-220ENST00000539232 CSF2RAP15509 400 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 CCND2P30279 289 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 NAPAP54920 295 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 CCL23P55773 120 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 FGD1P98174 961 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 SP4Q02446 784 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 ST3GAL1Q11201 340 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 PPIGQ13427 754 aaKnown RBP eCLIP8.31□□□□□ -1.08
LMO3-220ENST00000539232 GSE1Q14687 1217 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 GPNMBQ14956 572 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 TCTN1Q2MV58 587 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 C8orf34Q49A92 452 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 TMEM240Q5SV17 173 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 SYNE3Q6ZMZ3 975 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 FAM178BQ8IXR5 827 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 FBXL16Q8N461 479 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 SMARCC2Q8TAQ2 1214 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 DHX38Q92620 1227 aaKnown RBP8.31□□□□□ -1.08
LMO3-220ENST00000539232 ZBTB10Q96DT7 871 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 SCLYQ96I15 445 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 MTG1Q9BT17 334 aaPredicted RBP8.31□□□□□ -1.08
LMO3-220ENST00000539232 RIC8AQ9NPQ8 531 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 PDRG1Q9NUG6 133 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 TPCN1Q9ULQ1 816 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 PCDHA6Q9UN73 950 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 PCDHA8Q9Y5H6 950 aa8.31□□□□□ -1.08
LMO3-220ENST00000539232 DCHS1Q96JQ0 3298 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 POTEB3A0JP26 581 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 SMCO2A6NFE2 343 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 CTDNEP1O95476 244 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 TIMP1P01033 207 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 ARP10275 920 aa8.3□□□□□ -1.08
LMO3-220ENST00000539232 HOXD8P13378 290 aaPredicted RBP8.3□□□□□ -1.08
LMO3-220ENST00000539232 SSTR3P32745 418 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms