RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 STAM2O75886 525 aa14.45□□□□□ -0.1
VAMP1-206ENST00000538970 LGALS2P05162 132 aa14.45□□□□□ -0.1
VAMP1-206ENST00000538970 ICAM3P32942 547 aa14.45□□□□□ -0.1
VAMP1-206ENST00000538970 KIF5BP33176 963 aa14.45□□□□□ -0.1
VAMP1-206ENST00000538970 SEMA3FQ13275 785 aa14.45□□□□□ -0.1
VAMP1-206ENST00000538970 SERINC5Q86VE9 423 aa14.45□□□□□ -0.1
VAMP1-206ENST00000538970 CTCFLQ8NI51 663 aaPredicted RBP14.45□□□□□ -0.1
VAMP1-206ENST00000538970 SNX27Q96L92 541 aa14.45□□□□□ -0.1
VAMP1-206ENST00000538970 MTA3Q9BTC8 594 aa14.45□□□□□ -0.1
VAMP1-206ENST00000538970 C17orf102A2RUQ5 167 aa14.44□□□□□ -0.1
VAMP1-206ENST00000538970 SPATA31C2B4DYI2 1134 aa14.44□□□□□ -0.1
VAMP1-206ENST00000538970 H3BRB1 525 aa14.44□□□□□ -0.1
VAMP1-206ENST00000538970 SH2B2O14492 632 aaPredicted RBP14.44□□□□□ -0.1
VAMP1-206ENST00000538970 FIBPO43427 364 aa14.44□□□□□ -0.1
VAMP1-206ENST00000538970 PRC1O43663 620 aa14.44□□□□□ -0.1
VAMP1-206ENST00000538970 GPR37L1O60883 481 aa14.44□□□□□ -0.1
VAMP1-206ENST00000538970 EFCAB14O75071 495 aa14.44□□□□□ -0.1
VAMP1-206ENST00000538970 GJB5O95377 273 aa14.44□□□□□ -0.1
VAMP1-206ENST00000538970 SMARCA1P28370 1054 aa14.44□□□□□ -0.1
VAMP1-206ENST00000538970 AAK1Q2M2I8 961 aa14.44□□□□□ -0.1
VAMP1-206ENST00000538970 KRT40Q6A162 431 aa14.44□□□□□ -0.1
VAMP1-206ENST00000538970 CASC1Q6TDU7 716 aa14.44□□□□□ -0.1
VAMP1-206ENST00000538970 METTL7BQ6UX53 244 aa14.44□□□□□ -0.1
VAMP1-206ENST00000538970 RRP36Q96EU6 259 aaKnown RBP14.44□□□□□ -0.1
VAMP1-206ENST00000538970 LSG1Q9H089 658 aaKnown RBP14.44□□□□□ -0.1
VAMP1-206ENST00000538970 TUT1Q9H6E5 874 aaKnown RBP14.44□□□□□ -0.1
VAMP1-206ENST00000538970 TRIP12Q14669 1992 aaPredicted RBP14.43□□□□□ -0.1
VAMP1-206ENST00000538970 EMSYQ7Z589 1322 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 MYO9BQ13459 2157 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 PIK3CDO00329 1044 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 NOP56O00567 594 aaKnown RBP14.43□□□□□ -0.1
VAMP1-206ENST00000538970 MEIS2O14770 477 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 LPXNO60711 386 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 LGR5O75473 907 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 PLEKHA8P1O95397 391 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 SMIM10L2AP0DMW4 78 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 SMIM10L2BP0DMW5 78 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 THPOP40225 353 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 GRB10Q13322 594 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 MKRN4PQ13434 485 aaPredicted RBP14.43□□□□□ -0.1
VAMP1-206ENST00000538970 COL9A3Q14050 684 aaPredicted RBP14.43□□□□□ -0.1
VAMP1-206ENST00000538970 IKBKEQ14164 716 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 NEDD9Q14511 834 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 PCNX4Q63HM2 1172 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 USP17L6PQ6QN14 398 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 SMARCC2Q8TAQ2 1214 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 ATP6V0A1Q93050 837 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 GPR20Q99678 358 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 LZTS2Q9BRK4 669 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 ZBED2Q9BTP6 218 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 CD320Q9NPF0 282 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 RTEL1Q9NZ71 1219 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 SEC63Q9UGP8 760 aaKnown RBP14.43□□□□□ -0.1
VAMP1-206ENST00000538970 MYH7BA7E2Y1 1941 aa14.43□□□□□ -0.1
VAMP1-206ENST00000538970 RSPH10B2B2RC85 870 aa14.42□□□□□ -0.1
VAMP1-206ENST00000538970 RSPH10BP0C881 870 aa14.42□□□□□ -0.1
VAMP1-206ENST00000538970 MCM5P33992 734 aa14.42□□□□□ -0.1
VAMP1-206ENST00000538970 MRE11P49959 708 aa14.42□□□□□ -0.1
VAMP1-206ENST00000538970 XRRA1Q6P2D8 792 aa14.42□□□□□ -0.1
VAMP1-206ENST00000538970 NFXL1Q6ZNB6 911 aa14.42□□□□□ -0.1
VAMP1-206ENST00000538970 CYFIP1Q7L576 1253 aa14.42□□□□□ -0.1
VAMP1-206ENST00000538970 TRIM50Q86XT4 487 aa14.42□□□□□ -0.1
VAMP1-206ENST00000538970 SRBD1Q8N5C6 995 aaKnown RBP14.42□□□□□ -0.1
VAMP1-206ENST00000538970 CUL5Q93034 780 aa14.42□□□□□ -0.1
VAMP1-206ENST00000538970 TMEM87BQ96K49 555 aa14.42□□□□□ -0.1
VAMP1-206ENST00000538970 RAD9AQ99638 391 aa14.42□□□□□ -0.1
VAMP1-206ENST00000538970 USP26Q9BXU7 913 aa14.42□□□□□ -0.1
VAMP1-206ENST00000538970 TELO2Q9Y4R8 837 aa14.42□□□□□ -0.1
VAMP1-206ENST00000538970 BAZ2BQ9UIF8 2168 aaKnown RBP14.41□□□□□ -0.1
VAMP1-206ENST00000538970 LINC01553A4QN01 128 aa14.41□□□□□ -0.1
VAMP1-206ENST00000538970 CCDC69A6NI79 296 aa14.41□□□□□ -0.1
VAMP1-206ENST00000538970 SLC27A2O14975 620 aa14.41□□□□□ -0.1
VAMP1-206ENST00000538970 TREHO43280 583 aa14.41□□□□□ -0.1
VAMP1-206ENST00000538970 CAND2O75155 1236 aa14.41□□□□□ -0.1
VAMP1-206ENST00000538970 RXRAP19793 462 aa14.41□□□□□ -0.1
VAMP1-206ENST00000538970 GNAQP50148 359 aa14.41□□□□□ -0.1
VAMP1-206ENST00000538970 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.41□□□□□ -0.1
VAMP1-206ENST00000538970 CMTR1Q8N1G2 835 aaKnown RBP14.41□□□□□ -0.1
VAMP1-206ENST00000538970 TMTC2Q8N394 836 aa14.41□□□□□ -0.1
VAMP1-206ENST00000538970 DBF4BQ8NFT6 615 aa14.41□□□□□ -0.1
VAMP1-206ENST00000538970 GDPD5Q8WTR4 605 aa14.41□□□□□ -0.1
VAMP1-206ENST00000538970 SENP7Q9BQF6 1050 aa14.41□□□□□ -0.1
VAMP1-206ENST00000538970 ESYT1Q9BSJ8 1104 aa14.41□□□□□ -0.1
VAMP1-206ENST00000538970 RNPEPQ9H4A4 650 aa14.41□□□□□ -0.1
VAMP1-206ENST00000538970 MUC6Q6W4X9 2439 aa14.41□□□□□ -0.1
VAMP1-206ENST00000538970 PIEZO1Q92508 2521 aa14.4□□□□□ -0.1
VAMP1-206ENST00000538970 CALM1P0DP23 149 aa14.4□□□□□ -0.1
VAMP1-206ENST00000538970 CALM2P0DP24 149 aa14.4□□□□□ -0.1
VAMP1-206ENST00000538970 CALM3P0DP25 149 aa14.4□□□□□ -0.1
VAMP1-206ENST00000538970 LIFRP42702 1097 aa14.4□□□□□ -0.1
VAMP1-206ENST00000538970 ERVK-21P61565 698 aa14.4□□□□□ -0.1
VAMP1-206ENST00000538970 PLEKHG4Q58EX7 1191 aa14.4□□□□□ -0.1
VAMP1-206ENST00000538970 CREB3L3Q68CJ9 461 aa14.4□□□□□ -0.1
VAMP1-206ENST00000538970 FAM117BQ6P1L5 589 aa14.4□□□□□ -0.1
VAMP1-206ENST00000538970 NLRX1Q86UT6 975 aa14.4□□□□□ -0.1
VAMP1-206ENST00000538970 SETD4Q9NVD3 440 aa14.4□□□□□ -0.1
VAMP1-206ENST00000538970 ZNF215Q9UL58 517 aaPredicted RBP14.4□□□□□ -0.1
VAMP1-206ENST00000538970 COG5Q9UP83 839 aa14.4□□□□□ -0.1
VAMP1-206ENST00000538970 PRRC2BQ5JSZ5 2229 aaKnown RBP14.39□□□□□ -0.11
VAMP1-206ENST00000538970 AMHP03971 560 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms