RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 TULP2O00295 520 aa13.23□□□□□ -0.29
CPNE8-203ENST00000538596 BBOX1O75936 387 aa13.23□□□□□ -0.29
CPNE8-203ENST00000538596 PRPF6O94906 941 aaKnown RBP13.23□□□□□ -0.29
CPNE8-203ENST00000538596 TRIM37O94972 964 aa13.23□□□□□ -0.29
CPNE8-203ENST00000538596 FGFR1OPO95684 399 aaKnown RBP13.23□□□□□ -0.29
CPNE8-203ENST00000538596 TAL1P17542 331 aaPredicted RBP13.23□□□□□ -0.29
CPNE8-203ENST00000538596 TRIM34Q9BYJ4 488 aa13.23□□□□□ -0.29
CPNE8-203ENST00000538596 POLD4Q9HCU8 107 aa13.23□□□□□ -0.29
CPNE8-203ENST00000538596 PODXL2Q9NZ53 605 aa13.23□□□□□ -0.29
CPNE8-203ENST00000538596 ADAMTSL1Q8N6G6 1762 aa13.23□□□□□ -0.29
CPNE8-203ENST00000538596 AARSP49588 968 aaKnown RBP eCLIP13.22□□□□□ -0.29
CPNE8-203ENST00000538596 POLR2FP61218 127 aaKnown RBP13.22□□□□□ -0.29
CPNE8-203ENST00000538596 FKBP3Q00688 224 aaKnown RBP13.22□□□□□ -0.29
CPNE8-203ENST00000538596 SKIDA1Q1XH10 827 aa13.22□□□□□ -0.29
CPNE8-203ENST00000538596 LSM14BQ9BX40 385 aaKnown RBP13.22□□□□□ -0.29
CPNE8-203ENST00000538596 ACBD3Q9H3P7 528 aa13.22□□□□□ -0.29
CPNE8-203ENST00000538596 VIPAS39Q9H9C1 493 aa13.22□□□□□ -0.29
CPNE8-203ENST00000538596 FOCADQ5VW36 1801 aa13.22□□□□□ -0.29
CPNE8-203ENST00000538596 BRWD3Q6RI45 1802 aa13.22□□□□□ -0.29
CPNE8-203ENST00000538596 ZBTB5O15062 677 aa13.22□□□□□ -0.29
CPNE8-203ENST00000538596 FAM83BQ5T0W9 1011 aa13.22□□□□□ -0.29
CPNE8-203ENST00000538596 LEKR1Q6ZMV7 388 aa13.22□□□□□ -0.29
CPNE8-203ENST00000538596 TLR10Q9BXR5 811 aa13.22□□□□□ -0.29
CPNE8-203ENST00000538596 LY75O60449 1722 aa13.22□□□□□ -0.29
CPNE8-203ENST00000538596 A0A0U1RQG5 324 aaPredicted RBP13.22□□□□□ -0.29
CPNE8-203ENST00000538596 PLA2G4BP0C869 781 aa13.22□□□□□ -0.29
CPNE8-203ENST00000538596 MCM3P25205 808 aa13.22□□□□□ -0.29
CPNE8-203ENST00000538596 MRPL12P52815 198 aaKnown RBP13.22□□□□□ -0.29
CPNE8-203ENST00000538596 PSMD2Q13200 908 aa13.22□□□□□ -0.29
CPNE8-203ENST00000538596 HERC4Q5GLZ8 1057 aaPredicted RBP13.22□□□□□ -0.29
CPNE8-203ENST00000538596 KLHDC7AQ5VTJ3 777 aa13.22□□□□□ -0.29
CPNE8-203ENST00000538596 SND1Q7KZF4 910 aaKnown RBP eCLIP13.22□□□□□ -0.29
CPNE8-203ENST00000538596 GPBP1Q86WP2 473 aa13.22□□□□□ -0.29
CPNE8-203ENST00000538596 DNAAF5Q86Y56 855 aa13.22□□□□□ -0.29
CPNE8-203ENST00000538596 P2RX7Q99572 595 aaKnown RBP13.22□□□□□ -0.29
CPNE8-203ENST00000538596 PACSIN2Q9UNF0 486 aaPredicted RBP13.22□□□□□ -0.29
CPNE8-203ENST00000538596 PCDHA2Q9Y5H9 948 aa13.22□□□□□ -0.29
CPNE8-203ENST00000538596 ABCB11O95342 1321 aa13.21□□□□□ -0.29
CPNE8-203ENST00000538596 POTEFA5A3E0 1075 aa13.21□□□□□ -0.29
CPNE8-203ENST00000538596 POTEIP0CG38 1075 aa13.21□□□□□ -0.29
CPNE8-203ENST00000538596 CASP5P51878 434 aa13.21□□□□□ -0.29
CPNE8-203ENST00000538596 TCP10Q12799 353 aa13.21□□□□□ -0.29
CPNE8-203ENST00000538596 CDC42EP5Q6NZY7 148 aa13.21□□□□□ -0.29
CPNE8-203ENST00000538596 POTEGQ6S5H5 508 aa13.21□□□□□ -0.29
CPNE8-203ENST00000538596 POTEEQ6S8J3 1075 aa13.21□□□□□ -0.29
CPNE8-203ENST00000538596 MMGT1Q8N4V1 131 aa13.21□□□□□ -0.29
CPNE8-203ENST00000538596 AENQ8WTP8 325 aaKnown RBP13.21□□□□□ -0.29
CPNE8-203ENST00000538596 SCFD1Q8WVM8 642 aa13.21□□□□□ -0.29
CPNE8-203ENST00000538596 ALS2CR12Q96Q35 445 aa13.21□□□□□ -0.29
CPNE8-203ENST00000538596 BCAS3Q9H6U6 928 aa13.21□□□□□ -0.29
CPNE8-203ENST00000538596 KCNQ5Q9NR82 932 aa13.21□□□□□ -0.29
CPNE8-203ENST00000538596 RBM12Q9NTZ6 932 aaKnown RBP13.21□□□□□ -0.29
CPNE8-203ENST00000538596 HYOU1Q9Y4L1 999 aa13.21□□□□□ -0.29
CPNE8-203ENST00000538596 ARFGEF1Q9Y6D6 1849 aa13.21□□□□□ -0.29
CPNE8-203ENST00000538596 MEIS1O00470 390 aa13.21□□□□□ -0.3
CPNE8-203ENST00000538596 TRIM66O15016 1216 aa13.21□□□□□ -0.3
CPNE8-203ENST00000538596 MED24O75448 989 aa13.21□□□□□ -0.3
CPNE8-203ENST00000538596 PSMC6P62333 389 aa13.21□□□□□ -0.3
CPNE8-203ENST00000538596 QRICH1Q2TAL8 776 aa13.21□□□□□ -0.3
CPNE8-203ENST00000538596 CCDC181Q5TID7 509 aa13.21□□□□□ -0.3
CPNE8-203ENST00000538596 LRRC31Q6UY01 552 aa13.21□□□□□ -0.3
CPNE8-203ENST00000538596 IQCDQ96DY2 449 aa13.21□□□□□ -0.3
CPNE8-203ENST00000538596 PACSIN1Q9BY11 444 aa13.21□□□□□ -0.3
CPNE8-203ENST00000538596 DNAJC18Q9H819 358 aa13.21□□□□□ -0.3
CPNE8-203ENST00000538596 ATF5Q9Y2D1 282 aaPredicted RBP13.21□□□□□ -0.3
CPNE8-203ENST00000538596 MYH4Q9Y623 1939 aa13.2□□□□□ -0.3
CPNE8-203ENST00000538596 PPEF1O14829 653 aaPredicted RBP13.2□□□□□ -0.3
CPNE8-203ENST00000538596 ONECUT3O60422 494 aaPredicted RBP13.2□□□□□ -0.3
CPNE8-203ENST00000538596 FTCDO95954 541 aa13.2□□□□□ -0.3
CPNE8-203ENST00000538596 RNASE9P60153 205 aaKnown RBP13.2□□□□□ -0.3
CPNE8-203ENST00000538596 KCTD19Q17RG1 926 aaPredicted RBP13.2□□□□□ -0.3
CPNE8-203ENST00000538596 ARSHQ5FYA8 562 aa13.2□□□□□ -0.3
CPNE8-203ENST00000538596 SFMBT2Q5VUG0 894 aa13.2□□□□□ -0.3
CPNE8-203ENST00000538596 AFAP1L1Q8TED9 768 aa13.2□□□□□ -0.3
CPNE8-203ENST00000538596 TBC1D5Q92609 795 aa13.2□□□□□ -0.3
CPNE8-203ENST00000538596 PCDHA1Q9Y5I3 950 aa13.2□□□□□ -0.3
CPNE8-203ENST00000538596 PJA2O43164 708 aa13.2□□□□□ -0.3
CPNE8-203ENST00000538596 ACTN1P12814 892 aa13.2□□□□□ -0.3
CPNE8-203ENST00000538596 CYP11B2P19099 503 aa13.2□□□□□ -0.3
CPNE8-203ENST00000538596 HOXA10P31260 410 aaPredicted RBP13.2□□□□□ -0.3
CPNE8-203ENST00000538596 RAPGEF1Q13905 1077 aa13.2□□□□□ -0.3
CPNE8-203ENST00000538596 HAUS3Q68CZ6 603 aa13.2□□□□□ -0.3
CPNE8-203ENST00000538596 IQCEQ6IPM2 695 aa13.2□□□□□ -0.3
CPNE8-203ENST00000538596 PROM2Q8N271 834 aa13.2□□□□□ -0.3
CPNE8-203ENST00000538596 FAM133AQ8N9E0 248 aa13.2□□□□□ -0.3
CPNE8-203ENST00000538596 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.2□□□□□ -0.3
CPNE8-203ENST00000538596 FAM184BQ9ULE4 1060 aa13.2□□□□□ -0.3
CPNE8-203ENST00000538596 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.2□□□□□ -0.3
CPNE8-203ENST00000538596 A0A087X0T9 212 aa13.19□□□□□ -0.3
CPNE8-203ENST00000538596 ZSCAN5CA6NGD5 496 aaPredicted RBP13.19□□□□□ -0.3
CPNE8-203ENST00000538596 ANKRD65E5RJM6 399 aa13.19□□□□□ -0.3
CPNE8-203ENST00000538596 PALMO75781 387 aa13.19□□□□□ -0.3
CPNE8-203ENST00000538596 FAM228BP0C875 321 aa13.19□□□□□ -0.3
CPNE8-203ENST00000538596 KLRC1P26715 233 aa13.19□□□□□ -0.3
CPNE8-203ENST00000538596 MAPK8IP2Q13387 824 aaPredicted RBP13.19□□□□□ -0.3
CPNE8-203ENST00000538596 SLC9C1Q4G0N8 1177 aa13.19□□□□□ -0.3
CPNE8-203ENST00000538596 APOBEC3HQ6NTF7 200 aaKnown RBP13.19□□□□□ -0.3
CPNE8-203ENST00000538596 PPP1R18Q6NYC8 613 aa13.19□□□□□ -0.3
CPNE8-203ENST00000538596 NOX5Q96PH1 765 aa13.19□□□□□ -0.3
CPNE8-203ENST00000538596 LRRC27Q9C0I9 530 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms