RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 TUFT1Q9NNX1 390 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 LZTFL1Q9NQ48 299 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 OGFRQ9NZT2 677 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 KCND2Q9NZV8 630 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 CDC23Q9UJX2 597 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 KIAA1024Q9UPX6 916 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 PCDHAC2Q9Y5I4 1007 aa7.35□□□□□ -1.23
USP28-206ENST00000538224 LOC285556D6RIA3 1793 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 ANO9A1A5B4 782 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 CETN3O15182 167 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 WDR46O15213 610 aaKnown RBP7.34□□□□□ -1.23
USP28-206ENST00000538224 SLC16A3O15427 465 aaKnown RBP7.34□□□□□ -1.23
USP28-206ENST00000538224 CALUO43852 315 aaPredicted RBP7.34□□□□□ -1.23
USP28-206ENST00000538224 USO1O60763 962 aaKnown RBP7.34□□□□□ -1.23
USP28-206ENST00000538224 COBLO75128 1261 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 TBCAO75347 108 aaKnown RBP7.34□□□□□ -1.23
USP28-206ENST00000538224 RAD17O75943 681 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 EYA4O95677 639 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 SSBP05455 408 aaKnown RBP eCLIP7.34□□□□□ -1.23
USP28-206ENST00000538224 FDX1P10109 184 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 H2AFXP16104 143 aaPredicted RBP7.34□□□□□ -1.23
USP28-206ENST00000538224 CYP11B2P19099 503 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 RPS12P25398 132 aaKnown RBP7.34□□□□□ -1.23
USP28-206ENST00000538224 CAP2P40123 477 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 EPS15P42566 896 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 SLC12A3P55017 1021 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 MAP3K10Q02779 954 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 EN1Q05925 392 aaPredicted RBP7.34□□□□□ -1.23
USP28-206ENST00000538224 CKAP4Q07065 602 aaKnown RBP7.34□□□□□ -1.23
USP28-206ENST00000538224 SPIRE1Q08AE8 756 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 BMS1Q14692 1282 aaKnown RBP7.34□□□□□ -1.23
USP28-206ENST00000538224 TNIP1Q15025 636 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 HERC4Q5GLZ8 1057 aaPredicted RBP7.34□□□□□ -1.23
USP28-206ENST00000538224 NCAPH2Q6IBW4 605 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 IQCEQ6IPM2 695 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 TMCO3Q6UWJ1 677 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 LRRC55Q6ZSA7 311 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 NIPA1Q7RTP0 329 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 KCNK18Q7Z418 384 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 MCF2L2Q86YR7 1114 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 ZC3H3Q8IXZ2 948 aaKnown RBP7.34□□□□□ -1.23
USP28-206ENST00000538224 ACRBPQ8NEB7 543 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 NEK11Q8NG66 645 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 SYN2Q92777 582 aaPredicted RBP7.34□□□□□ -1.23
USP28-206ENST00000538224 LENG9Q96B70 501 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 HOOK2Q96ED9 719 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 WDR24Q96S15 920 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 NUDT12Q9BQG2 462 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 SLF1Q9BQI6 1058 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 DEFB129Q9H1M3 183 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 VEZTQ9HBM0 779 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 MAP3K20Q9NYL2 800 aaKnown RBP7.34□□□□□ -1.23
USP28-206ENST00000538224 CEP72Q9P209 647 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 SEL1LQ9UBV2 794 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 VAV3Q9UKW4 847 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 PLAGL2Q9UPG8 496 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 SIK3Q9Y2K2 1263 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 DAAM1Q9Y4D1 1078 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 COL4A5P29400 1685 aa7.34□□□□□ -1.23
USP28-206ENST00000538224 A0A1W2PRG0 241 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 CLRN2A0PK11 232 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 POTEFA5A3E0 1075 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 E9PMD0 336 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 TRAF5O00463 557 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 EIF3DO15371 548 aaKnown RBP eCLIP7.33□□□□□ -1.24
USP28-206ENST00000538224 MSH4O15457 936 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 PPP1R12BO60237 982 aaPredicted RBP7.33□□□□□ -1.24
USP28-206ENST00000538224 MED24O75448 989 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 POTEIP0CG38 1075 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 MCM3P25205 808 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 RPL13P26373 211 aaKnown RBP7.33□□□□□ -1.24
USP28-206ENST00000538224 VAV2P52735 878 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 CHMP4BP1P59074 171 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 FAM193AP78312 1265 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 KIF5AQ12840 1032 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 PPP2R5CQ13362 524 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 NFIL3Q16649 462 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 BMT2Q1RMZ1 405 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 ERCC6LQ2NKX8 1250 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 FAM83BQ5T0W9 1011 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 LRCH2Q5VUJ6 765 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 CIAPIN1Q6FI81 312 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 FBXO38Q6PIJ6 1188 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 POTEGQ6S5H5 508 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 POTEEQ6S8J3 1075 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 RSRC2Q7L4I2 434 aaKnown RBP7.33□□□□□ -1.24
USP28-206ENST00000538224 CACNA2D4Q7Z3S7 1137 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 FMNL3Q8IVF7 1028 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 KRT222Q8N1A0 295 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 SLC35F6Q8N357 371 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 JDP2Q8WYK2 163 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 SLC5A5Q92911 643 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 JAKMIP2Q96AA8 810 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 ZBED3Q96IU2 234 aaPredicted RBP7.33□□□□□ -1.24
USP28-206ENST00000538224 CCDC42Q96M95 316 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 TANGO6Q9C0B7 1094 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 GBP3Q9H0R5 595 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 DEF6Q9H4E7 631 aa7.33□□□□□ -1.24
USP28-206ENST00000538224 NHEJ1Q9H9Q4 299 aaPredicted RBP7.33□□□□□ -1.24
USP28-206ENST00000538224 METTL14Q9HCE5 456 aaKnown RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms