RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 SLC9C1Q4G0N8 1177 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 FAM83BQ5T0W9 1011 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 CCDC181Q5TID7 509 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 USP17L6PQ6QN14 398 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 CCDC65Q8IXS2 484 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 GOLGA6L1Q8N7Z2 621 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 CEP63Q96MT8 703 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 LSM14BQ9BX40 385 aaKnown RBP15.82■□□□□ 0.12
USP44-203ENST00000537435 EHD2Q9NZN4 543 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 DMGDHQ9UI17 866 aaKnown RBP15.82■□□□□ 0.12
USP44-203ENST00000537435 ATF5Q9Y2D1 282 aaPredicted RBP15.82■□□□□ 0.12
USP44-203ENST00000537435 MYO3BQ8WXR4 1341 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 POTEB3A0JP26 581 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 POTECB2RU33 542 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 PPEF1O14829 653 aaPredicted RBP15.82■□□□□ 0.12
USP44-203ENST00000537435 GGCXP38435 758 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 IRX5P78411 483 aaPredicted RBP15.82■□□□□ 0.12
USP44-203ENST00000537435 MRPS25P82663 173 aaKnown RBP15.82■□□□□ 0.12
USP44-203ENST00000537435 DDR1Q08345 913 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 SFMBT2Q5VUG0 894 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 POTEBQ6S5H4 581 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 AFAP1L1Q8TED9 768 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 AENQ8WTP8 325 aaKnown RBP15.82■□□□□ 0.12
USP44-203ENST00000537435 NOX5Q96PH1 765 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 FAM184BQ9ULE4 1060 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 PCDHA2Q9Y5H9 948 aa15.82■□□□□ 0.12
USP44-203ENST00000537435 FOCADQ5VW36 1801 aa15.81■□□□□ 0.12
USP44-203ENST00000537435 THSD7AQ9UPZ6 1657 aa15.81■□□□□ 0.12
USP44-203ENST00000537435 TLR2O60603 784 aa15.81■□□□□ 0.12
USP44-203ENST00000537435 NAP1L1P55209 391 aaKnown RBP15.81■□□□□ 0.12
USP44-203ENST00000537435 POLR2FP61218 127 aaKnown RBP15.81■□□□□ 0.12
USP44-203ENST00000537435 HERC4Q5GLZ8 1057 aaPredicted RBP15.81■□□□□ 0.12
USP44-203ENST00000537435 ARHGAP27Q6ZUM4 889 aa15.81■□□□□ 0.12
USP44-203ENST00000537435 TMC4Q7Z404 712 aa15.81■□□□□ 0.12
USP44-203ENST00000537435 GPBP1Q86WP2 473 aa15.81■□□□□ 0.12
USP44-203ENST00000537435 NUCKS1Q9H1E3 243 aaKnown RBP15.81■□□□□ 0.12
USP44-203ENST00000537435 KANSL2Q9H9L4 492 aa15.81■□□□□ 0.12
USP44-203ENST00000537435 RBAK-RBAKDNI3L0D1 243 aa15.8■□□□□ 0.12
USP44-203ENST00000537435 AGPSO00116 658 aa15.8■□□□□ 0.12
USP44-203ENST00000537435 RAD21O60216 631 aa15.8■□□□□ 0.12
USP44-203ENST00000537435 SERPING1P05155 500 aa15.8■□□□□ 0.12
USP44-203ENST00000537435 HLA-DOAP06340 250 aa15.8■□□□□ 0.12
USP44-203ENST00000537435 PAFAH1B1P43034 410 aa15.8■□□□□ 0.12
USP44-203ENST00000537435 APBA1Q02410 837 aa15.8■□□□□ 0.12
USP44-203ENST00000537435 KLHDC7AQ5VTJ3 777 aa15.8■□□□□ 0.12
USP44-203ENST00000537435 CDC42EP5Q6NZY7 148 aa15.8■□□□□ 0.12
USP44-203ENST00000537435 TRIM59Q8IWR1 403 aa15.8■□□□□ 0.12
USP44-203ENST00000537435 SP8Q8IXZ3 490 aa15.8■□□□□ 0.12
USP44-203ENST00000537435 NAP1L4Q99733 375 aaKnown RBP15.8■□□□□ 0.12
USP44-203ENST00000537435 TLR10Q9BXR5 811 aa15.8■□□□□ 0.12
USP44-203ENST00000537435 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.8■□□□□ 0.12
USP44-203ENST00000537435 C10orf71Q711Q0 1435 aa15.8■□□□□ 0.12
USP44-203ENST00000537435 RPS6KA5O75582 802 aa15.8■□□□□ 0.12
USP44-203ENST00000537435 GNA14O95837 355 aa15.8■□□□□ 0.12
USP44-203ENST00000537435 CYP11B2P19099 503 aa15.8■□□□□ 0.12
USP44-203ENST00000537435 SLC7A5Q01650 507 aa15.8■□□□□ 0.12
USP44-203ENST00000537435 QRICH1Q2TAL8 776 aa15.8■□□□□ 0.12
USP44-203ENST00000537435 SND1Q7KZF4 910 aaKnown RBP eCLIP15.8■□□□□ 0.12
USP44-203ENST00000537435 RNF10Q8N5U6 811 aaKnown RBP15.8■□□□□ 0.12
USP44-203ENST00000537435 SCFD1Q8WVM8 642 aa15.8■□□□□ 0.12
USP44-203ENST00000537435 SYN2Q92777 582 aaPredicted RBP15.8■□□□□ 0.12
USP44-203ENST00000537435 IVLP07476 585 aa15.79■□□□□ 0.12
USP44-203ENST00000537435 STAT3P40763 770 aa15.79■□□□□ 0.12
USP44-203ENST00000537435 MARSP56192 900 aaKnown RBP15.79■□□□□ 0.12
USP44-203ENST00000537435 RUBCNQ92622 972 aa15.79■□□□□ 0.12
USP44-203ENST00000537435 ANO3Q9BYT9 981 aa15.79■□□□□ 0.12
USP44-203ENST00000537435 ZC3H12CQ9C0D7 883 aaKnown RBP15.79■□□□□ 0.12
USP44-203ENST00000537435 KCTD10Q9H3F6 313 aa15.79■□□□□ 0.12
USP44-203ENST00000537435 KCNMB3Q9NPA1 279 aa15.79■□□□□ 0.12
USP44-203ENST00000537435 EMILIN3Q9NT22 766 aa15.79■□□□□ 0.12
USP44-203ENST00000537435 GOLGA6BA6NDN3 693 aa15.79■□□□□ 0.12
USP44-203ENST00000537435 POLRMTO00411 1230 aaKnown RBP15.79■□□□□ 0.12
USP44-203ENST00000537435 MED24O75448 989 aa15.79■□□□□ 0.12
USP44-203ENST00000537435 NFIAQ12857 509 aa15.79■□□□□ 0.12
USP44-203ENST00000537435 DOK7Q18PE1 504 aa15.79■□□□□ 0.12
USP44-203ENST00000537435 HAUS3Q68CZ6 603 aa15.79■□□□□ 0.12
USP44-203ENST00000537435 ZHX3Q9H4I2 956 aa15.79■□□□□ 0.12
USP44-203ENST00000537435 ATP6V0A2Q9Y487 856 aa15.79■□□□□ 0.12
USP44-203ENST00000537435 PCDHA1Q9Y5I3 950 aa15.79■□□□□ 0.12
USP44-203ENST00000537435 KLRG2A4D1S0 409 aaPredicted RBP15.78■□□□□ 0.12
USP44-203ENST00000537435 KRT18P05783 430 aaKnown RBP15.78■□□□□ 0.12
USP44-203ENST00000537435 TBC1D5Q92609 795 aa15.78■□□□□ 0.12
USP44-203ENST00000537435 MYH7BA7E2Y1 1941 aa15.78■□□□□ 0.12
USP44-203ENST00000537435 USP11P51784 963 aa15.78■□□□□ 0.12
USP44-203ENST00000537435 ADAM9Q13443 819 aa15.78■□□□□ 0.12
USP44-203ENST00000537435 RAPGEF1Q13905 1077 aa15.78■□□□□ 0.12
USP44-203ENST00000537435 APOBEC3HQ6NTF7 200 aaKnown RBP15.78■□□□□ 0.12
USP44-203ENST00000537435 FOXR1Q6PIV2 292 aa15.78■□□□□ 0.12
USP44-203ENST00000537435 LRRC31Q6UY01 552 aa15.78■□□□□ 0.12
USP44-203ENST00000537435 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.78■□□□□ 0.12
USP44-203ENST00000537435 MS4A14Q96JA4 679 aa15.78■□□□□ 0.12
USP44-203ENST00000537435 GLT8D2Q9H1C3 349 aa15.78■□□□□ 0.12
USP44-203ENST00000537435 RBM12Q9NTZ6 932 aaKnown RBP15.78■□□□□ 0.12
USP44-203ENST00000537435 MYH10P35580 1976 aa15.78■□□□□ 0.12
USP44-203ENST00000537435 POTEFA5A3E0 1075 aa15.77■□□□□ 0.12
USP44-203ENST00000537435 POTEIP0CG38 1075 aa15.77■□□□□ 0.12
USP44-203ENST00000537435 SLC12A3P55017 1021 aa15.77■□□□□ 0.12
USP44-203ENST00000537435 ARID5AQ03989 594 aa15.77■□□□□ 0.12
USP44-203ENST00000537435 CDC37Q16543 378 aaPredicted RBP15.77■□□□□ 0.12
USP44-203ENST00000537435 ARSHQ5FYA8 562 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms