RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 TNNI3KQ59H18 835 aa11.38□□□□□ -0.59
CPSF7-217ENST00000537162 C12orf60Q5U649 245 aa11.38□□□□□ -0.59
CPSF7-217ENST00000537162 KANK3Q6NY19 840 aa11.38□□□□□ -0.59
CPSF7-217ENST00000537162 CHST3Q7LGC8 479 aa11.38□□□□□ -0.59
CPSF7-217ENST00000537162 WDR63Q8IWG1 891 aa11.38□□□□□ -0.59
CPSF7-217ENST00000537162 ZDHHC14Q8IZN3 488 aa11.38□□□□□ -0.59
CPSF7-217ENST00000537162 MICAL1Q8TDZ2 1067 aa11.38□□□□□ -0.59
CPSF7-217ENST00000537162 SCFD2Q8WU76 684 aa11.38□□□□□ -0.59
CPSF7-217ENST00000537162 ZNF512BQ96KM6 892 aaPredicted RBP11.38□□□□□ -0.59
CPSF7-217ENST00000537162 NYAP2Q9P242 653 aa11.38□□□□□ -0.59
CPSF7-217ENST00000537162 CLIP2Q9UDT6 1046 aa11.38□□□□□ -0.59
CPSF7-217ENST00000537162 FBXL21Q9UKT6 434 aa11.38□□□□□ -0.59
CPSF7-217ENST00000537162 FPGT-TNNI3KV9GXZ4 949 aa11.38□□□□□ -0.59
CPSF7-217ENST00000537162 CACNA1IQ9P0X4 2223 aa11.37□□□□□ -0.59
CPSF7-217ENST00000537162 LOC400499M0QZD8 3231 aa11.37□□□□□ -0.59
CPSF7-217ENST00000537162 LY6KQ17RY6 165 aa11.37□□□□□ -0.59
CPSF7-217ENST00000537162 TKFCQ3LXA3 575 aa11.37□□□□□ -0.59
CPSF7-217ENST00000537162 SLFNL1Q499Z3 407 aa11.37□□□□□ -0.59
CPSF7-217ENST00000537162 NAALADL2Q58DX5 795 aa11.37□□□□□ -0.59
CPSF7-217ENST00000537162 CCDC62Q6P9F0 684 aa11.37□□□□□ -0.59
CPSF7-217ENST00000537162 SLC30A10Q6XR72 485 aa11.37□□□□□ -0.59
CPSF7-217ENST00000537162 C1orf210Q8IVY1 113 aa11.37□□□□□ -0.59
CPSF7-217ENST00000537162 DENND4AQ7Z401 1863 aa11.37□□□□□ -0.59
CPSF7-217ENST00000537162 BPTFQ12830 3046 aa11.36□□□□□ -0.59
CPSF7-217ENST00000537162 TMEM232C9JQI7 657 aa11.36□□□□□ -0.59
CPSF7-217ENST00000537162 TAF4O00268 1085 aa11.36□□□□□ -0.59
CPSF7-217ENST00000537162 NFIBO00712 420 aa11.36□□□□□ -0.59
CPSF7-217ENST00000537162 GLULP15104 373 aa11.36□□□□□ -0.59
CPSF7-217ENST00000537162 NCLP19338 710 aaKnown RBP11.36□□□□□ -0.59
CPSF7-217ENST00000537162 PAN2Q504Q3 1202 aaKnown RBP11.36□□□□□ -0.59
CPSF7-217ENST00000537162 LURAP1LQ8IV03 231 aa11.36□□□□□ -0.59
CPSF7-217ENST00000537162 TDRD5Q8NAT2 981 aaKnown RBP11.36□□□□□ -0.59
CPSF7-217ENST00000537162 ARMT1Q9H993 441 aa11.36□□□□□ -0.59
CPSF7-217ENST00000537162 DBNLQ9UJU6 430 aaKnown RBP11.36□□□□□ -0.59
CPSF7-217ENST00000537162 DUSP12Q9UNI6 340 aa11.36□□□□□ -0.59
CPSF7-217ENST00000537162 SMG5Q9UPR3 1016 aaKnown RBP11.36□□□□□ -0.59
CPSF7-217ENST00000537162 PATJQ8NI35 1801 aa11.36□□□□□ -0.59
CPSF7-217ENST00000537162 TTC3P53804 2025 aa11.36□□□□□ -0.59
CPSF7-217ENST00000537162 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.35□□□□□ -0.59
CPSF7-217ENST00000537162 SRRM3A6NNA2 597 aaPredicted RBP11.35□□□□□ -0.59
CPSF7-217ENST00000537162 ENPP3O14638 875 aa11.35□□□□□ -0.59
CPSF7-217ENST00000537162 LRRN2O75325 713 aa11.35□□□□□ -0.59
CPSF7-217ENST00000537162 F2P00734 622 aa11.35□□□□□ -0.59
CPSF7-217ENST00000537162 CFHP08603 1231 aa11.35□□□□□ -0.59
CPSF7-217ENST00000537162 CASTP20810 708 aaKnown RBP11.35□□□□□ -0.59
CPSF7-217ENST00000537162 EDNRBP24530 442 aa11.35□□□□□ -0.59
CPSF7-217ENST00000537162 GATMP50440 423 aa11.35□□□□□ -0.59
CPSF7-217ENST00000537162 PDE4DQ08499 809 aa11.35□□□□□ -0.59
CPSF7-217ENST00000537162 TBC1D8BQ0IIM8 1120 aa11.35□□□□□ -0.59
CPSF7-217ENST00000537162 APOBRQ0VD83 1088 aa11.35□□□□□ -0.59
CPSF7-217ENST00000537162 TDGQ13569 410 aa11.35□□□□□ -0.59
CPSF7-217ENST00000537162 UNQ6494/PRO21346Q6UXR6 183 aa11.35□□□□□ -0.59
CPSF7-217ENST00000537162 DHX37Q8IY37 1157 aaKnown RBP11.35□□□□□ -0.59
CPSF7-217ENST00000537162 STK11IPQ8N1F8 1099 aa11.35□□□□□ -0.59
CPSF7-217ENST00000537162 KDF1Q8NAX2 398 aaPredicted RBP11.35□□□□□ -0.59
CPSF7-217ENST00000537162 SSH1Q8WYL5 1049 aa11.35□□□□□ -0.59
CPSF7-217ENST00000537162 CDCA3Q99618 268 aaPredicted RBP11.35□□□□□ -0.59
CPSF7-217ENST00000537162 TBC1D17Q9HA65 648 aa11.35□□□□□ -0.59
CPSF7-217ENST00000537162 ADD3Q9UEY8 706 aaKnown RBP11.35□□□□□ -0.59
CPSF7-217ENST00000537162 COL4A3Q01955 1670 aa11.35□□□□□ -0.59
CPSF7-217ENST00000537162 AKAP13Q12802 2813 aa11.35□□□□□ -0.59
CPSF7-217ENST00000537162 SMG1Q96Q15 3661 aaKnown RBP11.34□□□□□ -0.59
CPSF7-217ENST00000537162 IGF2RP11717 2491 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 IGKV6D-41A0A0C4DH26 115 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 PNMA6EA0A0J9YXQ4 647 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 HIDE1A8MVS5 230 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 FSCN2O14926 492 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 TREHO43280 583 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 GDF9O60383 454 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 BMP3P12645 472 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 PDE6AP16499 860 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 RASA1P20936 1047 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 SPEM2Q0P670 501 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 MTX1Q13505 466 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 CCDC184Q52MB2 194 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 SOWAHCQ53LP3 525 aaPredicted RBP11.34□□□□□ -0.59
CPSF7-217ENST00000537162 RASGRP2Q7LDG7 609 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 C12orf76Q8N812 135 aaPredicted RBP11.34□□□□□ -0.59
CPSF7-217ENST00000537162 NETO1Q8TDF5 533 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 LINC01599Q8WXQ3 324 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 APBB2Q92870 758 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 ADAM7Q9H2U9 754 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 AAASQ9NRG9 546 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 IGSF5Q9NSI5 407 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 CA14Q9ULX7 337 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 ZNF532Q9HCE3 1301 aa11.34□□□□□ -0.59
CPSF7-217ENST00000537162 NAV2Q8IVL1 2488 aa11.33□□□□□ -0.6
CPSF7-217ENST00000537162 KIAA1217Q5T5P2 1943 aa11.33□□□□□ -0.6
CPSF7-217ENST00000537162 HELZ2Q9BYK8 2649 aaKnown RBP11.33□□□□□ -0.6
CPSF7-217ENST00000537162 TCRBV5S4A2TA0A5A2 114 aa11.33□□□□□ -0.6
CPSF7-217ENST00000537162 PTPDC1A2A3K4 754 aa11.33□□□□□ -0.6
CPSF7-217ENST00000537162 GH1P01241 217 aa11.33□□□□□ -0.6
CPSF7-217ENST00000537162 HOXB8P17481 243 aaPredicted RBP11.33□□□□□ -0.6
CPSF7-217ENST00000537162 CALML3P27482 149 aa11.33□□□□□ -0.6
CPSF7-217ENST00000537162 G3BP1Q13283 466 aaKnown RBP eCLIP11.33□□□□□ -0.6
CPSF7-217ENST00000537162 DGKDQ16760 1214 aa11.33□□□□□ -0.6
CPSF7-217ENST00000537162 PLPP4Q5VZY2 271 aa11.33□□□□□ -0.6
CPSF7-217ENST00000537162 SLFN13Q68D06 897 aa11.33□□□□□ -0.6
CPSF7-217ENST00000537162 CMTR2Q8IYT2 770 aaKnown RBP11.33□□□□□ -0.6
CPSF7-217ENST00000537162 NECTIN4Q96NY8 510 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms