RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	PASD1	Q8IV76	773 aa		7.29	□□□□□ -1.24
PRKDC-208	ENST00000536710	SIRT2	Q8IXJ6	389 aa		7.29	□□□□□ -1.24
PRKDC-208	ENST00000536710	ASPSCR1	Q9BZE9	553 aa		7.29	□□□□□ -1.24
PRKDC-208	ENST00000536710	CD244	Q9BZW8	370 aa		7.29	□□□□□ -1.24
PRKDC-208	ENST00000536710	PCIF1	Q9H4Z3	704 aa		7.29	□□□□□ -1.24
PRKDC-208	ENST00000536710	SLC6A20	Q9NP91	592 aa		7.29	□□□□□ -1.24
PRKDC-208	ENST00000536710	PAK6	Q9NQU5	681 aa	Predicted RBP	7.29	□□□□□ -1.24
PRKDC-208	ENST00000536710	CHPF2	Q9P2E5	772 aa		7.29	□□□□□ -1.24
PRKDC-208	ENST00000536710	ACSL6	Q9UKU0	697 aa		7.29	□□□□□ -1.24
PRKDC-208	ENST00000536710	TRHDE	Q9UKU6	1024 aa		7.29	□□□□□ -1.24
PRKDC-208	ENST00000536710	TCRBV5S4A2T	A0A5A2	114 aa		7.28	□□□□□ -1.24
PRKDC-208	ENST00000536710	PSPN	O60542	156 aa		7.28	□□□□□ -1.24
PRKDC-208	ENST00000536710	MAFK	O60675	156 aa		7.28	□□□□□ -1.24
PRKDC-208	ENST00000536710	SLC9A1	P19634	815 aa		7.28	□□□□□ -1.24
PRKDC-208	ENST00000536710	SPINK2	P20155	84 aa		7.28	□□□□□ -1.24
PRKDC-208	ENST00000536710	TTF1	Q15361	905 aa	Predicted RBP	7.28	□□□□□ -1.24
PRKDC-208	ENST00000536710	CHRNA2	Q15822	529 aa		7.28	□□□□□ -1.24
PRKDC-208	ENST00000536710	DDB1	Q16531	1140 aa		7.28	□□□□□ -1.24
PRKDC-208	ENST00000536710	CPZ	Q66K79	652 aa		7.28	□□□□□ -1.24
PRKDC-208	ENST00000536710	OTOP1	Q7RTM1	612 aa		7.28	□□□□□ -1.24
PRKDC-208	ENST00000536710	EFHB	Q8N7U6	833 aa		7.28	□□□□□ -1.24
PRKDC-208	ENST00000536710	TRIM8	Q9BZR9	551 aa		7.28	□□□□□ -1.24
PRKDC-208	ENST00000536710	THRAP3	Q9Y2W1	955 aa	Known RBP	7.28	□□□□□ -1.24
PRKDC-208	ENST00000536710	NUB1	Q9Y5A7	615 aa		7.28	□□□□□ -1.24
PRKDC-208	ENST00000536710	EID1	Q9Y6B2	187 aa		7.28	□□□□□ -1.24
PRKDC-208	ENST00000536710	MAN2B1	O00754	1011 aa		7.27	□□□□□ -1.25
PRKDC-208	ENST00000536710	SLC27A2	O14975	620 aa		7.27	□□□□□ -1.25
PRKDC-208	ENST00000536710	PRKD3	O94806	890 aa		7.27	□□□□□ -1.25
PRKDC-208	ENST00000536710	ARL4A	P40617	200 aa		7.27	□□□□□ -1.25
PRKDC-208	ENST00000536710	GALK1	P51570	392 aa		7.27	□□□□□ -1.25
PRKDC-208	ENST00000536710	KIF11	P52732	1056 aa		7.27	□□□□□ -1.25
PRKDC-208	ENST00000536710	HHIPL2	Q6UWX4	724 aa		7.27	□□□□□ -1.25
PRKDC-208	ENST00000536710	FMNL3	Q8IVF7	1028 aa		7.27	□□□□□ -1.25
PRKDC-208	ENST00000536710	NLGN4X	Q8N0W4	816 aa		7.27	□□□□□ -1.25
PRKDC-208	ENST00000536710	KIAA1958	Q8N8K9	716 aa		7.27	□□□□□ -1.25
PRKDC-208	ENST00000536710	AGBL5	Q8NDL9	886 aa		7.27	□□□□□ -1.25
PRKDC-208	ENST00000536710	YIPF4	Q9BSR8	244 aa		7.27	□□□□□ -1.25
PRKDC-208	ENST00000536710	AP5M1	Q9H0R1	490 aa		7.27	□□□□□ -1.25
PRKDC-208	ENST00000536710	RXFP1	Q9HBX9	757 aa		7.27	□□□□□ -1.25
PRKDC-208	ENST00000536710	TOMM22	Q9NS69	142 aa		7.27	□□□□□ -1.25
PRKDC-208	ENST00000536710	SRPK3	Q9UPE1	567 aa		7.27	□□□□□ -1.25
PRKDC-208	ENST00000536710	ATP23	Q9Y6H3	246 aa		7.27	□□□□□ -1.25
PRKDC-208	ENST00000536710	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	NOTO	A8MTQ0	251 aa		7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	HGS	O14964	777 aa	Predicted RBP	7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	WNT11	O96014	354 aa		7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	HPX	P02790	462 aa		7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	GDNF	P39905	211 aa		7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	TIGD5	Q53EQ6	642 aa		7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	FIGN	Q5HY92	759 aa		7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	HABP4	Q5JVS0	413 aa	Known RBP	7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	SYDE2	Q5VT97	1194 aa		7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	FSTL4	Q6MZW2	842 aa		7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	DCP2	Q8IU60	420 aa	Known RBP	7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	RBM12B	Q8IXT5	1001 aa	Known RBP	7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	RAVER1	Q8IY67	606 aa	Known RBP	7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	UHMK1	Q8TAS1	419 aa	Known RBP	7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	SH3RF2	Q8TEC5	729 aa		7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	MYLIP	Q8WY64	445 aa		7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	SLC5A5	Q92911	643 aa		7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	AHCYL2	Q96HN2	611 aa	Known RBP	7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	SCYL1	Q96KG9	808 aa		7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	PCMTD2	Q9NV79	361 aa		7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	DBR1	Q9UK59	544 aa	Known RBP	7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	ADAMTS6	Q9UKP5	1117 aa		7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	SIT1	Q9Y3P8	196 aa		7.26	□□□□□ -1.25
PRKDC-208	ENST00000536710	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	7.25	□□□□□ -1.25
PRKDC-208	ENST00000536710	ZBTB48	P10074	688 aa	Predicted RBP	7.25	□□□□□ -1.25
PRKDC-208	ENST00000536710	YBX3	P16989	372 aa	Known RBP eCLIP	7.25	□□□□□ -1.25	2e-8	■■□□□ 13.5
PRKDC-208	ENST00000536710	NEK2	P51955	445 aa		7.25	□□□□□ -1.25
PRKDC-208	ENST00000536710	EPHB1	P54762	984 aa		7.25	□□□□□ -1.25
PRKDC-208	ENST00000536710	SESN3	P58005	492 aa		7.25	□□□□□ -1.25
PRKDC-208	ENST00000536710	TMEM132B	Q14DG7	1078 aa		7.25	□□□□□ -1.25
PRKDC-208	ENST00000536710	NR0B2	Q15466	257 aa		7.25	□□□□□ -1.25
PRKDC-208	ENST00000536710	HSP90AB2P	Q58FF8	381 aa		7.25	□□□□□ -1.25
PRKDC-208	ENST00000536710	BROX	Q5VW32	411 aa		7.25	□□□□□ -1.25
PRKDC-208	ENST00000536710	CREB3L3	Q68CJ9	461 aa		7.25	□□□□□ -1.25
PRKDC-208	ENST00000536710	ZBTB46	Q86UZ6	589 aa		7.25	□□□□□ -1.25
PRKDC-208	ENST00000536710	LILRA2	Q8N149	483 aa		7.25	□□□□□ -1.25
PRKDC-208	ENST00000536710	ELF4	Q99607	663 aa	Predicted RBP	7.25	□□□□□ -1.25
PRKDC-208	ENST00000536710	VTA1	Q9NP79	307 aa		7.25	□□□□□ -1.25
PRKDC-208	ENST00000536710	AASDHPPT	Q9NRN7	309 aa		7.25	□□□□□ -1.25
PRKDC-208	ENST00000536710	MBNL3	Q9NUK0	354 aa	Known RBP	7.25	□□□□□ -1.25
PRKDC-208	ENST00000536710	C19orf73	Q9NVV2	129 aa		7.25	□□□□□ -1.25
PRKDC-208	ENST00000536710	MYOT	Q9UBF9	498 aa		7.25	□□□□□ -1.25
PRKDC-208	ENST00000536710	SPO11	Q9Y5K1	396 aa		7.25	□□□□□ -1.25
PRKDC-208	ENST00000536710	EFEMP2	O95967	443 aa		7.24	□□□□□ -1.25
PRKDC-208	ENST00000536710	RNASE1	P07998	156 aa	Known RBP	7.24	□□□□□ -1.25
PRKDC-208	ENST00000536710	GLI4	P10075	376 aa		7.24	□□□□□ -1.25
PRKDC-208	ENST00000536710	FAP	Q12884	760 aa		7.24	□□□□□ -1.25
PRKDC-208	ENST00000536710	ABCB5	Q2M3G0	1257 aa		7.24	□□□□□ -1.25
PRKDC-208	ENST00000536710	NFXL1	Q6ZNB6	911 aa		7.24	□□□□□ -1.25
PRKDC-208	ENST00000536710	KCTD1	Q719H9	257 aa		7.24	□□□□□ -1.25
PRKDC-208	ENST00000536710	NLRX1	Q86UT6	975 aa		7.24	□□□□□ -1.25
PRKDC-208	ENST00000536710	NOSTRIN	Q8IVI9	506 aa		7.24	□□□□□ -1.25
PRKDC-208	ENST00000536710	NETO2	Q8NC67	525 aa		7.24	□□□□□ -1.25
PRKDC-208	ENST00000536710	CLRN3	Q8NCR9	226 aa		7.24	□□□□□ -1.25
PRKDC-208	ENST00000536710	SEC14L1	Q92503	715 aa		7.24	□□□□□ -1.25
PRKDC-208	ENST00000536710	SMOC1	Q9H4F8	434 aa		7.24	□□□□□ -1.25
PRKDC-208	ENST00000536710	SP110	Q9HB58	689 aa		7.24	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms