RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.1□□□□□ -1.11
CLIP1-207ENST00000536634 MARCH2Q9P0N8 246 aa8.1□□□□□ -1.11
CLIP1-207ENST00000536634 SMG5Q9UPR3 1016 aaKnown RBP8.1□□□□□ -1.11
CLIP1-207ENST00000536634 RTEL1-TNFRSF6BF6WH68 1400 aa8.1□□□□□ -1.11
CLIP1-207ENST00000536634 UBR1Q8IWV7 1749 aa8.09□□□□□ -1.11
CLIP1-207ENST00000536634 WASHC2CQ9Y4E1 1318 aa8.09□□□□□ -1.11
CLIP1-207ENST00000536634 ROBO1Q9Y6N7 1651 aa8.09□□□□□ -1.11
CLIP1-207ENST00000536634 TCAF2A6NFQ2 919 aa8.09□□□□□ -1.11
CLIP1-207ENST00000536634 F8W031 263 aaPredicted RBP8.09□□□□□ -1.11
CLIP1-207ENST00000536634 DIAPH1O60610 1272 aaKnown RBP8.09□□□□□ -1.11
CLIP1-207ENST00000536634 TMEM62Q0P6H9 643 aa8.09□□□□□ -1.11
CLIP1-207ENST00000536634 MAP4K2Q12851 820 aa8.09□□□□□ -1.11
CLIP1-207ENST00000536634 KCNAB2Q13303 367 aa8.09□□□□□ -1.11
CLIP1-207ENST00000536634 MTERF2Q49AM1 385 aa8.09□□□□□ -1.11
CLIP1-207ENST00000536634 OLFML2BQ68BL8 750 aa8.09□□□□□ -1.11
CLIP1-207ENST00000536634 ZC3H14Q6PJT7 736 aaKnown RBP8.09□□□□□ -1.11
CLIP1-207ENST00000536634 NLRP10Q86W26 655 aa8.09□□□□□ -1.11
CLIP1-207ENST00000536634 LRRC47Q8N1G4 583 aaKnown RBP8.09□□□□□ -1.11
CLIP1-207ENST00000536634 KCTD13Q8WZ19 329 aa8.09□□□□□ -1.11
CLIP1-207ENST00000536634 OSBP2Q969R2 916 aa8.09□□□□□ -1.11
CLIP1-207ENST00000536634 DBX1A6NMT0 343 aa8.08□□□□□ -1.12
CLIP1-207ENST00000536634 NPIPB6E9PJ23 425 aa8.08□□□□□ -1.12
CLIP1-207ENST00000536634 ADCY3O60266 1144 aa8.08□□□□□ -1.12
CLIP1-207ENST00000536634 NTRK1P04629 796 aa8.08□□□□□ -1.12
CLIP1-207ENST00000536634 FGFR1P11362 822 aa8.08□□□□□ -1.12
CLIP1-207ENST00000536634 PABPC1P11940 636 aaKnown RBP8.08□□□□□ -1.12
CLIP1-207ENST00000536634 FPR2P25090 351 aa8.08□□□□□ -1.12
CLIP1-207ENST00000536634 LTBRP36941 435 aa8.08□□□□□ -1.12
CLIP1-207ENST00000536634 NCKAP1LP55160 1127 aa8.08□□□□□ -1.12
CLIP1-207ENST00000536634 PRR5P85299 388 aa8.08□□□□□ -1.12
CLIP1-207ENST00000536634 ZNF200P98182 395 aaPredicted RBP8.08□□□□□ -1.12
CLIP1-207ENST00000536634 WWC2Q6AWC2 1192 aa8.08□□□□□ -1.12
CLIP1-207ENST00000536634 LDHDQ86WU2 507 aa8.08□□□□□ -1.12
CLIP1-207ENST00000536634 USP33Q8TEY7 942 aa8.08□□□□□ -1.12
CLIP1-207ENST00000536634 ZNF669Q96BR6 464 aaPredicted RBP8.08□□□□□ -1.12
CLIP1-207ENST00000536634 DEPDC7Q96QD5 511 aa8.08□□□□□ -1.12
CLIP1-207ENST00000536634 BCAS3Q9H6U6 928 aa8.08□□□□□ -1.12
CLIP1-207ENST00000536634 SNTG2Q9NY99 539 aa8.08□□□□□ -1.12
CLIP1-207ENST00000536634 TIMM13Q9Y5L4 95 aaPredicted RBP8.08□□□□□ -1.12
CLIP1-207ENST00000536634 EP400Q96L91 3159 aa8.08□□□□□ -1.12
CLIP1-207ENST00000536634 FAM135BQ49AJ0 1406 aa8.08□□□□□ -1.12
CLIP1-207ENST00000536634 ABCC3O15438 1527 aa8.08□□□□□ -1.12
CLIP1-207ENST00000536634 CFAP65Q6ZU64 1925 aaKnown RBP8.07□□□□□ -1.12
CLIP1-207ENST00000536634 ERVK-7P63135 1459 aa8.07□□□□□ -1.12
CLIP1-207ENST00000536634 NCOA2Q15596 1464 aa8.07□□□□□ -1.12
CLIP1-207ENST00000536634 SCAF11Q99590 1463 aaKnown RBP8.07□□□□□ -1.12
CLIP1-207ENST00000536634 TRAV20A0A0B4J274 112 aa8.07□□□□□ -1.12
CLIP1-207ENST00000536634 BCL6P41182 706 aa8.07□□□□□ -1.12
CLIP1-207ENST00000536634 RPL11P62913 178 aaKnown RBP8.07□□□□□ -1.12
CLIP1-207ENST00000536634 JAG1P78504 1218 aa8.07□□□□□ -1.12
CLIP1-207ENST00000536634 SSPNQ14714 243 aa8.07□□□□□ -1.12
CLIP1-207ENST00000536634 NTRK3Q16288 839 aa8.07□□□□□ -1.12
CLIP1-207ENST00000536634 KCNA10Q16322 511 aa8.07□□□□□ -1.12
CLIP1-207ENST00000536634 CABP7Q86V35 215 aa8.07□□□□□ -1.12
CLIP1-207ENST00000536634 MZB1Q8WU39 189 aa8.07□□□□□ -1.12
CLIP1-207ENST00000536634 KRTAP4-11Q9BYQ6 195 aa8.07□□□□□ -1.12
CLIP1-207ENST00000536634 SIT1Q9Y3P8 196 aa8.07□□□□□ -1.12
CLIP1-207ENST00000536634 PCDHA2Q9Y5H9 948 aa8.07□□□□□ -1.12
CLIP1-207ENST00000536634 NPFFR2Q9Y5X5 522 aa8.07□□□□□ -1.12
CLIP1-207ENST00000536634 MAP3K1Q13233 1512 aa8.07□□□□□ -1.12
CLIP1-207ENST00000536634 CCDC141Q6ZP82 1450 aa8.06□□□□□ -1.12
CLIP1-207ENST00000536634 BLACEA4D250 179 aa8.06□□□□□ -1.12
CLIP1-207ENST00000536634 C22orf46C9J442 243 aa8.06□□□□□ -1.12
CLIP1-207ENST00000536634 N4BP3O15049 544 aa8.06□□□□□ -1.12
CLIP1-207ENST00000536634 FBLN1P23142 703 aa8.06□□□□□ -1.12
CLIP1-207ENST00000536634 LINC00310P59036 64 aa8.06□□□□□ -1.12
CLIP1-207ENST00000536634 SSRP1Q08945 709 aaKnown RBP8.06□□□□□ -1.12
CLIP1-207ENST00000536634 NSMFQ6X4W1 530 aa8.06□□□□□ -1.12
CLIP1-207ENST00000536634 USP53Q70EK8 1073 aa8.06□□□□□ -1.12
CLIP1-207ENST00000536634 IGDCC3Q8IVU1 814 aa8.06□□□□□ -1.12
CLIP1-207ENST00000536634 NETO2Q8NC67 525 aa8.06□□□□□ -1.12
CLIP1-207ENST00000536634 DBR1Q9UK59 544 aaKnown RBP8.06□□□□□ -1.12
CLIP1-207ENST00000536634 PCDHA5Q9Y5H7 936 aa8.06□□□□□ -1.12
CLIP1-207ENST00000536634 MROH1Q8NDA8 1641 aa8.06□□□□□ -1.12
CLIP1-207ENST00000536634 ARHGAP23Q9P227 1491 aa8.06□□□□□ -1.12
CLIP1-207ENST00000536634 SLIT1O75093 1534 aa8.05□□□□□ -1.12
CLIP1-207ENST00000536634 MSCO60682 206 aa8.05□□□□□ -1.12
CLIP1-207ENST00000536634 CFPP27918 469 aa8.05□□□□□ -1.12
CLIP1-207ENST00000536634 CEP68Q76N32 757 aa8.05□□□□□ -1.12
CLIP1-207ENST00000536634 C1QL4Q86Z23 238 aa8.05□□□□□ -1.12
CLIP1-207ENST00000536634 Q8N1Y9 231 aa8.05□□□□□ -1.12
CLIP1-207ENST00000536634 CEP152O94986 1710 aa8.05□□□□□ -1.12
CLIP1-207ENST00000536634 IRS4O14654 1257 aaPredicted RBP8.04□□□□□ -1.12
CLIP1-207ENST00000536634 MYO1BO43795 1136 aa8.04□□□□□ -1.12
CLIP1-207ENST00000536634 FOXB2Q5VYV0 432 aa8.04□□□□□ -1.12
CLIP1-207ENST00000536634 KCNT2Q6UVM3 1135 aa8.04□□□□□ -1.12
CLIP1-207ENST00000536634 LRRC56Q8IYG6 542 aaPredicted RBP8.04□□□□□ -1.12
CLIP1-207ENST00000536634 PANK1Q8TE04 598 aa8.04□□□□□ -1.12
CLIP1-207ENST00000536634 SRPK1Q96SB4 655 aaKnown RBP8.04□□□□□ -1.12
CLIP1-207ENST00000536634 PHF20Q9BVI0 1012 aa8.04□□□□□ -1.12
CLIP1-207ENST00000536634 TMEM94Q12767 1356 aa8.04□□□□□ -1.12
CLIP1-207ENST00000536634 MTUS2Q5JR59 1369 aa8.04□□□□□ -1.12
CLIP1-207ENST00000536634 CAMSAP2Q08AD1 1489 aa8.04□□□□□ -1.12
CLIP1-207ENST00000536634 IRS2Q9Y4H2 1338 aa8.03□□□□□ -1.12
CLIP1-207ENST00000536634 LRP6O75581 1613 aa8.03□□□□□ -1.12
CLIP1-207ENST00000536634 PHLPP1O60346 1717 aa8.03□□□□□ -1.12
CLIP1-207ENST00000536634 FAM153BP0C7A2 387 aa8.03□□□□□ -1.12
CLIP1-207ENST00000536634 PI3P19957 117 aa8.03□□□□□ -1.12
CLIP1-207ENST00000536634 SOGA3Q5TF21 947 aa8.03□□□□□ -1.12
CLIP1-207ENST00000536634 LRP10Q7Z4F1 713 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms