RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 PPFIBP1Q86W92 1011 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 SLC15A3Q8IY34 581 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 KIFAP3Q92845 792 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 TRIM11Q96F44 468 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 FGD4Q96M96 766 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 ELAC2Q9BQ52 826 aaKnown RBP4.09□□□□□ -1.75
MCF2-210ENST00000536274 VPS16Q9H269 839 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 ACTR5Q9H9F9 607 aaPredicted RBP4.09□□□□□ -1.75
MCF2-210ENST00000536274 METTL5Q9NRN9 209 aaKnown RBP4.09□□□□□ -1.75
MCF2-210ENST00000536274 ADAM22Q9P0K1 906 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 PHF24Q9UPV7 400 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 PA2G4Q9UQ80 394 aaKnown RBP4.09□□□□□ -1.75
MCF2-210ENST00000536274 MYH13Q9UKX3 1938 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 UBN2Q6ZU65 1347 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 GPR75-ASB3A0A0A6YYF3 556 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 UBE2Q2LH0YL09 131 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 EIF3FO00303 357 aaPredicted RBP4.09□□□□□ -1.75
MCF2-210ENST00000536274 UBOX5O94941 541 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 HNRNPCP07910 306 aaKnown RBP eCLIP4.09□□□□□ -1.75
MCF2-210ENST00000536274 UBTFL6P0CB48 400 aaPredicted RBP4.09□□□□□ -1.75
MCF2-210ENST00000536274 GNAT2P19087 354 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 NFKBIAP25963 317 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 RPL13P26373 211 aaKnown RBP4.09□□□□□ -1.75
MCF2-210ENST00000536274 GSTT1P30711 240 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 KIF5BP33176 963 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 PRKCIP41743 596 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 IFNAR2P48551 515 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 AMPHP49418 695 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 PRELPP51888 382 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 ADCY1Q08828 1119 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 PABPC1LQ4VXU2 614 aaKnown RBP4.09□□□□□ -1.75
MCF2-210ENST00000536274 SH3D19Q5HYK7 790 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 CCDC122Q5T0U0 273 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 NFRKBQ6P4R8 1299 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 POTEEQ6S8J3 1075 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 RASGRP2Q7LDG7 609 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 DDX42Q86XP3 938 aaKnown RBP eCLIP4.09□□□□□ -1.75
MCF2-210ENST00000536274 CNTROBQ8N137 903 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 ANKRD13CQ8N6S4 541 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 LINC00301Q8NCQ3 95 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 SUPT20HQ8NEM7 779 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 NEK9Q8TD19 979 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 C17orf50Q8WW18 174 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 PCMTD1Q96MG8 357 aaPredicted RBP4.09□□□□□ -1.75
MCF2-210ENST00000536274 BPIFA3Q9BQP9 254 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 UNC45AQ9H3U1 944 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 ZWILCHQ9H900 591 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 LRRC4BQ9NT99 713 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 TUBGCP4Q9UGJ1 667 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 TSR3Q9UJK0 312 aaKnown RBP4.09□□□□□ -1.75
MCF2-210ENST00000536274 USP20Q9Y2K6 914 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 TMA7Q9Y2S6 64 aaKnown RBP4.09□□□□□ -1.75
MCF2-210ENST00000536274 TMEM98Q9Y2Y6 226 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 ASB3Q9Y575 518 aa4.09□□□□□ -1.75
MCF2-210ENST00000536274 TRIM43BA6NCK2 446 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 FOXO6A8MYZ6 492 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 H7C1D1 291 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 SPTLC2O15270 562 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 MAP3K7O43318 606 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 IDEP14735 1019 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 ATP2A2P16615 1042 aaKnown RBP4.09□□□□□ -1.76
MCF2-210ENST00000536274 XBP1P17861 261 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 HOXC9P31274 260 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 SYKP43405 635 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 MCL1Q07820 350 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 TMED1Q13445 227 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 NFE2L2Q16236 605 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 ADALQ6DHV7 355 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 OLFM4Q6UX06 510 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 TAX1BP1Q86VP1 789 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 SLF2Q8IX21 1173 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 NSUN7Q8NE18 718 aaKnown RBP4.09□□□□□ -1.76
MCF2-210ENST00000536274 ZCRB1Q8TBF4 217 aaKnown RBP4.09□□□□□ -1.76
MCF2-210ENST00000536274 TAF4BQ92750 862 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 CNKSR1Q969H4 720 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 SPATA17Q96L03 361 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 CEP295NLQ96MC4 621 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 DDX23Q9BUQ8 820 aaKnown RBP4.09□□□□□ -1.76
MCF2-210ENST00000536274 EPB41L5Q9HCM4 733 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 MLXIPLQ9NP71 852 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 PLCB1Q9NQ66 1216 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.09□□□□□ -1.76
MCF2-210ENST00000536274 STAP2Q9UGK3 403 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 ANGEL1Q9UNK9 670 aaKnown RBP4.09□□□□□ -1.76
MCF2-210ENST00000536274 NOVA2Q9UNW9 492 aaKnown RBP4.09□□□□□ -1.76
MCF2-210ENST00000536274 EMILIN1Q9Y6C2 1016 aa4.09□□□□□ -1.76
MCF2-210ENST00000536274 ATXN2Q99700 1313 aaKnown RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 CCT8L1PA6NM43 557 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 IFIT3O14879 490 aaKnown RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 MFAP3LO75121 409 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 DNAJC8O75937 253 aaPredicted RBP4.08□□□□□ -1.76
MCF2-210ENST00000536274 ZBTB7AO95365 584 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 PDE6CP51160 858 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 PSMD7P51665 324 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 RAD23BP54727 409 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 HERVK_113P62684 666 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 CUL4BQ13620 913 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 NR1I3Q14994 352 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 C6orf183Q5T699 404 aa4.08□□□□□ -1.76
MCF2-210ENST00000536274 SHC4Q6S5L8 630 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms