RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 DDX41Q9UJV9 622 aaKnown RBP12.99□□□□□ -0.33
CDCA3-206ENST00000536241 ARIH2O95376 493 aa12.98□□□□□ -0.33
CDCA3-206ENST00000536241 GNRH1P01148 92 aa12.98□□□□□ -0.33
CDCA3-206ENST00000536241 IGHA2P01877 340 aa12.98□□□□□ -0.33
CDCA3-206ENST00000536241 TXNP10599 105 aaKnown RBP12.98□□□□□ -0.33
CDCA3-206ENST00000536241 KCNA2P16389 499 aa12.98□□□□□ -0.33
CDCA3-206ENST00000536241 SPIRE1Q08AE8 756 aa12.98□□□□□ -0.33
CDCA3-206ENST00000536241 RESP18Q5W5W9 173 aa12.98□□□□□ -0.33
CDCA3-206ENST00000536241 CCDC62Q6P9F0 684 aa12.98□□□□□ -0.33
CDCA3-206ENST00000536241 SENP7Q9BQF6 1050 aa12.98□□□□□ -0.33
CDCA3-206ENST00000536241 VTA1Q9NP79 307 aa12.98□□□□□ -0.33
CDCA3-206ENST00000536241 LRWD1Q9UFC0 647 aa12.98□□□□□ -0.33
CDCA3-206ENST00000536241 VAV3Q9UKW4 847 aa12.98□□□□□ -0.33
CDCA3-206ENST00000536241 ZNF236Q9UL36 1845 aa12.98□□□□□ -0.33
CDCA3-206ENST00000536241 RBM47A0AV96 593 aaKnown RBP12.97□□□□□ -0.33
CDCA3-206ENST00000536241 EML1O00423 815 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 CHMP2AO43633 222 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 LIG1P18858 919 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 ADCYAP1R1P41586 468 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 PPP2R5CQ13362 524 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 IRF5Q13568 498 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 TTLL4Q14679 1199 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 NCAPH2Q6IBW4 605 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 KCNV1Q6PIU1 500 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 CYFIP1Q7L576 1253 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 FSIP1Q8NA03 581 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 GPT2Q8TD30 523 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 SCFD2Q8WU76 684 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 TRIB2Q92519 343 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 SYMPKQ92797 1274 aaKnown RBP12.97□□□□□ -0.33
CDCA3-206ENST00000536241 COPS5Q92905 334 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 AK8Q96MA6 479 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 SDF4Q9BRK5 362 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 RAB34Q9BZG1 259 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 UNC45AQ9H3U1 944 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 GOLPH3LQ9H4A5 285 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 ZHX1Q9UKY1 873 aaPredicted RBP12.97□□□□□ -0.33
CDCA3-206ENST00000536241 TRIM17Q9Y577 477 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 NFASCO94856 1347 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.97□□□□□ -0.33
CDCA3-206ENST00000536241 ADCY3O60266 1144 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 ZNF865P0CJ78 1059 aaPredicted RBP12.97□□□□□ -0.33
CDCA3-206ENST00000536241 ELNP15502 786 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 UBA1P22314 1058 aaKnown RBP12.97□□□□□ -0.33
CDCA3-206ENST00000536241 PTGS1P23219 599 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 UBA7P41226 1012 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 NDUFA8P51970 172 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 TRIM32Q13049 653 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 NEDD9Q14511 834 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 CCDC144BQ3MJ40 725 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 MFSD14CQ5VZR4 134 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 IQSEC1Q6DN90 963 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 B3GNT9Q6UX72 402 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 RAET1EQ8TD07 263 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 MRPS27Q92552 414 aaKnown RBP12.97□□□□□ -0.33
CDCA3-206ENST00000536241 MMTAG2Q9BU76 263 aaKnown RBP12.97□□□□□ -0.33
CDCA3-206ENST00000536241 FAM13BQ9NYF5 915 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 TELO2Q9Y4R8 837 aa12.97□□□□□ -0.33
CDCA3-206ENST00000536241 FOXN1O15353 648 aa12.96□□□□□ -0.34
CDCA3-206ENST00000536241 GGPS1O95749 300 aa12.96□□□□□ -0.34
CDCA3-206ENST00000536241 CCNE2O96020 404 aa12.96□□□□□ -0.34
CDCA3-206ENST00000536241 PFKFB1P16118 471 aa12.96□□□□□ -0.34
CDCA3-206ENST00000536241 SMPD1P17405 629 aa12.96□□□□□ -0.34
CDCA3-206ENST00000536241 PTMSP20962 102 aa12.96□□□□□ -0.34
CDCA3-206ENST00000536241 SP4Q02446 784 aa12.96□□□□□ -0.34
CDCA3-206ENST00000536241 ZRSR1Q15695 479 aaKnown RBP12.96□□□□□ -0.34
CDCA3-206ENST00000536241 CELF3Q5SZQ8 465 aaKnown RBP12.96□□□□□ -0.34
CDCA3-206ENST00000536241 GJC2Q5T442 439 aaPredicted RBP12.96□□□□□ -0.34
CDCA3-206ENST00000536241 MIER3Q7Z3K6 550 aa12.96□□□□□ -0.34
CDCA3-206ENST00000536241 CABP7Q86V35 215 aa12.96□□□□□ -0.34
CDCA3-206ENST00000536241 TRMT44Q8IYL2 757 aaKnown RBP12.96□□□□□ -0.34
CDCA3-206ENST00000536241 PDILTQ8N807 584 aa12.96□□□□□ -0.34
CDCA3-206ENST00000536241 GIMAP8Q8ND71 665 aaPredicted RBP12.96□□□□□ -0.34
CDCA3-206ENST00000536241 PLIN2Q99541 437 aa12.96□□□□□ -0.34
CDCA3-206ENST00000536241 CCSER1Q9C0I3 900 aa12.96□□□□□ -0.34
CDCA3-206ENST00000536241 MLXIPQ9HAP2 919 aa12.96□□□□□ -0.34
CDCA3-206ENST00000536241 SLC9A2Q9UBY0 812 aa12.96□□□□□ -0.34
CDCA3-206ENST00000536241 KCNH3Q9ULD8 1083 aa12.96□□□□□ -0.34
CDCA3-206ENST00000536241 SAMM50Q9Y512 469 aa12.96□□□□□ -0.34
CDCA3-206ENST00000536241 A0A087X0B3 334 aa12.95□□□□□ -0.34
CDCA3-206ENST00000536241 FAM237AA0A1B0GTK4 181 aa12.95□□□□□ -0.34
CDCA3-206ENST00000536241 NR1I2O75469 434 aa12.95□□□□□ -0.34
CDCA3-206ENST00000536241 FARP2O94887 1054 aaPredicted RBP12.95□□□□□ -0.34
CDCA3-206ENST00000536241 ZNF202O95125 648 aa12.95□□□□□ -0.34
CDCA3-206ENST00000536241 PRMT2P55345 433 aa12.95□□□□□ -0.34
CDCA3-206ENST00000536241 TNFAIP2Q03169 654 aa12.95□□□□□ -0.34
CDCA3-206ENST00000536241 CACNB2Q08289 660 aaPredicted RBP12.95□□□□□ -0.34
CDCA3-206ENST00000536241 SNW1Q13573 536 aaKnown RBP12.95□□□□□ -0.34
CDCA3-206ENST00000536241 KARSQ15046 597 aaKnown RBP12.95□□□□□ -0.34
CDCA3-206ENST00000536241 EPHA7Q15375 998 aa12.95□□□□□ -0.34
CDCA3-206ENST00000536241 ECM1Q16610 540 aa12.95□□□□□ -0.34
CDCA3-206ENST00000536241 KRT79Q5XKE5 535 aa12.95□□□□□ -0.34
CDCA3-206ENST00000536241 CCDC73Q6ZRK6 1079 aa12.95□□□□□ -0.34
CDCA3-206ENST00000536241 DHX37Q8IY37 1157 aaKnown RBP12.95□□□□□ -0.34
CDCA3-206ENST00000536241 TRPV1Q8NER1 839 aa12.95□□□□□ -0.34
CDCA3-206ENST00000536241 ENGASEQ8NFI3 743 aa12.95□□□□□ -0.34
CDCA3-206ENST00000536241 SNX29Q8TEQ0 813 aa12.95□□□□□ -0.34
CDCA3-206ENST00000536241 EIF2AK1Q9BQI3 630 aaKnown RBP12.95□□□□□ -0.34
CDCA3-206ENST00000536241 JPH1Q9HDC5 661 aaPredicted RBP12.95□□□□□ -0.34
CDCA3-206ENST00000536241 DISC1Q9NRI5 854 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms