RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 ZNF746Q6NUN9 644 aaPredicted RBP18.32■□□□□ 0.52
VAMP1-205ENST00000535927 POTEDQ86YR6 584 aa18.32■□□□□ 0.52
VAMP1-205ENST00000535927 SMAP1Q8IYB5 467 aaPredicted RBP18.32■□□□□ 0.52
VAMP1-205ENST00000535927 TRIB2Q92519 343 aa18.32■□□□□ 0.52
VAMP1-205ENST00000535927 HAS1Q92839 578 aa18.32■□□□□ 0.52
VAMP1-205ENST00000535927 TEKT3Q9BXF9 490 aa18.32■□□□□ 0.52
VAMP1-205ENST00000535927 TTC12Q9H892 705 aaPredicted RBP18.32■□□□□ 0.52
VAMP1-205ENST00000535927 FLRT1Q9NZU1 646 aa18.32■□□□□ 0.52
VAMP1-205ENST00000535927 ZNF865P0CJ78 1059 aaPredicted RBP18.31■□□□□ 0.52
VAMP1-205ENST00000535927 TXNP10599 105 aaKnown RBP18.31■□□□□ 0.52
VAMP1-205ENST00000535927 AKR1A1P14550 325 aa18.31■□□□□ 0.52
VAMP1-205ENST00000535927 KCNA2P16389 499 aa18.31■□□□□ 0.52
VAMP1-205ENST00000535927 MUTP22033 750 aa18.31■□□□□ 0.52
VAMP1-205ENST00000535927 CCL14Q16627 93 aa18.31■□□□□ 0.52
VAMP1-205ENST00000535927 MAP3K21Q5TCX8 1036 aa18.31■□□□□ 0.52
VAMP1-205ENST00000535927 PRPF38BQ5VTL8 546 aaKnown RBP18.31■□□□□ 0.52
VAMP1-205ENST00000535927 LRCH2Q5VUJ6 765 aa18.31■□□□□ 0.52
VAMP1-205ENST00000535927 METTL7BQ6UX53 244 aa18.31■□□□□ 0.52
VAMP1-205ENST00000535927 ERMNQ8TAM6 284 aa18.31■□□□□ 0.52
VAMP1-205ENST00000535927 PYM1Q9BRP8 204 aaKnown RBP18.31■□□□□ 0.52
VAMP1-205ENST00000535927 TMEM60Q9H2L4 133 aa18.31■□□□□ 0.52
VAMP1-205ENST00000535927 A0A1W2PQ27 194 aa18.3■□□□□ 0.52
VAMP1-205ENST00000535927 A0A1W2PQ64 194 aa18.3■□□□□ 0.52
VAMP1-205ENST00000535927 A0A1W2PQD8 194 aa18.3■□□□□ 0.52
VAMP1-205ENST00000535927 GOLGA6L4A6NEF3 574 aa18.3■□□□□ 0.52
VAMP1-205ENST00000535927 WNT7AO00755 349 aa18.3■□□□□ 0.52
VAMP1-205ENST00000535927 DHX15O43143 795 aaKnown RBP18.3■□□□□ 0.52
VAMP1-205ENST00000535927 SEPT4O43236 478 aa18.3■□□□□ 0.52
VAMP1-205ENST00000535927 GH1P01241 217 aa18.3■□□□□ 0.52
VAMP1-205ENST00000535927 CYBAP13498 195 aa18.3■□□□□ 0.52
VAMP1-205ENST00000535927 CYP2C19P33261 490 aa18.3■□□□□ 0.52
VAMP1-205ENST00000535927 TXKP42681 527 aa18.3■□□□□ 0.52
VAMP1-205ENST00000535927 ME1P48163 572 aa18.3■□□□□ 0.52
VAMP1-205ENST00000535927 JAK3P52333 1124 aa18.3■□□□□ 0.52
VAMP1-205ENST00000535927 CAP1Q01518 475 aa18.3■□□□□ 0.52
VAMP1-205ENST00000535927 TNFAIP2Q03169 654 aa18.3■□□□□ 0.52
VAMP1-205ENST00000535927 CEBPZQ03701 1054 aaKnown RBP18.3■□□□□ 0.52
VAMP1-205ENST00000535927 SEMA3FQ13275 785 aa18.3■□□□□ 0.52
VAMP1-205ENST00000535927 NBR1Q14596 966 aa18.3■□□□□ 0.52
VAMP1-205ENST00000535927 CELF3Q5SZQ8 465 aaKnown RBP18.3■□□□□ 0.52
VAMP1-205ENST00000535927 FBXO46Q6PJ61 603 aaPredicted RBP18.3■□□□□ 0.52
VAMP1-205ENST00000535927 FBXO16Q8IX29 292 aaPredicted RBP18.3■□□□□ 0.52
VAMP1-205ENST00000535927 IGSF22Q8N9C0 903 aa18.3■□□□□ 0.52
VAMP1-205ENST00000535927 NEK9Q8TD19 979 aa18.3■□□□□ 0.52
VAMP1-205ENST00000535927 ZSWIM8A7E2V4 1837 aa18.3■□□□□ 0.52
VAMP1-205ENST00000535927 DKC1O60832 514 aaKnown RBP eCLIP18.29■□□□□ 0.52
VAMP1-205ENST00000535927 DUSP11O75319 330 aaKnown RBP18.29■□□□□ 0.52
VAMP1-205ENST00000535927 CCDC144BQ3MJ40 725 aa18.29■□□□□ 0.52
VAMP1-205ENST00000535927 FOXD4L6Q3SYB3 417 aaPredicted RBP18.29■□□□□ 0.52
VAMP1-205ENST00000535927 BRDTQ58F21 947 aaPredicted RBP18.29■□□□□ 0.52
VAMP1-205ENST00000535927 B3GNT9Q6UX72 402 aa18.29■□□□□ 0.52
VAMP1-205ENST00000535927 FOXD4L3Q6VB84 417 aaPredicted RBP18.29■□□□□ 0.52
VAMP1-205ENST00000535927 EEPD1Q7L9B9 569 aa18.29■□□□□ 0.52
VAMP1-205ENST00000535927 DHX37Q8IY37 1157 aaKnown RBP18.29■□□□□ 0.52
VAMP1-205ENST00000535927 MLXIPQ9HAP2 919 aa18.29■□□□□ 0.52
VAMP1-205ENST00000535927 JPH1Q9HDC5 661 aaPredicted RBP18.29■□□□□ 0.52
VAMP1-205ENST00000535927 SLC9A2Q9UBY0 812 aa18.29■□□□□ 0.52
VAMP1-205ENST00000535927 FBXO2Q9UK22 296 aaPredicted RBP18.29■□□□□ 0.52
VAMP1-205ENST00000535927 ZHX1Q9UKY1 873 aaPredicted RBP18.29■□□□□ 0.52
VAMP1-205ENST00000535927 WDR64B1ANS9 1081 aa18.28■□□□□ 0.52
VAMP1-205ENST00000535927 ECM2O94769 699 aaPredicted RBP18.28■□□□□ 0.52
VAMP1-205ENST00000535927 CMA1P23946 247 aa18.28■□□□□ 0.52
VAMP1-205ENST00000535927 TXLNAP40222 546 aa18.28■□□□□ 0.52
VAMP1-205ENST00000535927 NKX3-2P78367 333 aa18.28■□□□□ 0.52
VAMP1-205ENST00000535927 CACNB2Q08289 660 aaPredicted RBP18.28■□□□□ 0.52
VAMP1-205ENST00000535927 HAUS3Q68CZ6 603 aa18.28■□□□□ 0.52
VAMP1-205ENST00000535927 SPC25Q9HBM1 224 aa18.28■□□□□ 0.52
VAMP1-205ENST00000535927 LRWD1Q9UFC0 647 aa18.28■□□□□ 0.52
VAMP1-205ENST00000535927 PCDHA7Q9UN72 937 aa18.28■□□□□ 0.52
VAMP1-205ENST00000535927 PTCH2Q9Y6C5 1203 aa18.28■□□□□ 0.52
VAMP1-205ENST00000535927 KPNA6O60684 536 aa18.27■□□□□ 0.52
VAMP1-205ENST00000535927 ATP9AO75110 1047 aa18.27■□□□□ 0.52
VAMP1-205ENST00000535927 ATG7O95352 703 aa18.27■□□□□ 0.52
VAMP1-205ENST00000535927 PRKAR2AP13861 404 aaKnown RBP18.27■□□□□ 0.52
VAMP1-205ENST00000535927 UBA1P22314 1058 aaKnown RBP18.27■□□□□ 0.52
VAMP1-205ENST00000535927 MARCKSP29966 332 aaPredicted RBP18.27■□□□□ 0.52
VAMP1-205ENST00000535927 TECP42680 631 aa18.27■□□□□ 0.52
VAMP1-205ENST00000535927 ITGB3BPQ13352 177 aaPredicted RBP18.27■□□□□ 0.52
VAMP1-205ENST00000535927 EPHA7Q15375 998 aa18.27■□□□□ 0.52
VAMP1-205ENST00000535927 SEPT1Q8WYJ6 367 aa18.27■□□□□ 0.52
VAMP1-205ENST00000535927 FTOQ9C0B1 505 aaKnown RBP eCLIP18.27■□□□□ 0.52
VAMP1-205ENST00000535927 CCSER1Q9C0I3 900 aa18.27■□□□□ 0.52
VAMP1-205ENST00000535927 HMX1Q9NP08 348 aaPredicted RBP18.27■□□□□ 0.52
VAMP1-205ENST00000535927 FAM13BQ9NYF5 915 aa18.27■□□□□ 0.52
VAMP1-205ENST00000535927 VAV3Q9UKW4 847 aa18.27■□□□□ 0.52
VAMP1-205ENST00000535927 GNEQ9Y223 722 aaKnown RBP18.27■□□□□ 0.52
VAMP1-205ENST00000535927 PCDHA10Q9Y5I2 948 aa18.27■□□□□ 0.52
VAMP1-205ENST00000535927 VWA3AA6NCI4 1184 aa18.26■□□□□ 0.51
VAMP1-205ENST00000535927 DDX11L8A8MPP1 907 aa18.26■□□□□ 0.51
VAMP1-205ENST00000535927 PPFIA4O75335 1185 aa18.26■□□□□ 0.51
VAMP1-205ENST00000535927 FARP2O94887 1054 aaPredicted RBP18.26■□□□□ 0.51
VAMP1-205ENST00000535927 GGPS1O95749 300 aa18.26■□□□□ 0.51
VAMP1-205ENST00000535927 UBA7P41226 1012 aa18.26■□□□□ 0.51
VAMP1-205ENST00000535927 UBE2HP62256 183 aa18.26■□□□□ 0.51
VAMP1-205ENST00000535927 SP2Q02086 613 aa18.26■□□□□ 0.51
VAMP1-205ENST00000535927 SPIRE1Q08AE8 756 aa18.26■□□□□ 0.51
VAMP1-205ENST00000535927 AXDND1Q5T1B0 1012 aaPredicted RBP18.26■□□□□ 0.51
VAMP1-205ENST00000535927 KRT79Q5XKE5 535 aa18.26■□□□□ 0.51
VAMP1-205ENST00000535927 MIS18BP1Q6P0N0 1132 aa18.26■□□□□ 0.51
VAMP1-205ENST00000535927 PPTC7Q8NI37 304 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms