RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 KAT2BQ92831 832 aa25.88■■□□□ 1.73
SFSWAP-204ENST00000535399 TOX2Q96NM4 488 aa25.88■■□□□ 1.73
SFSWAP-204ENST00000535399 AGO4Q9HCK5 861 aaKnown RBP25.88■■□□□ 1.73
SFSWAP-204ENST00000535399 PKD2L1Q9P0L9 805 aa25.88■■□□□ 1.73
SFSWAP-204ENST00000535399 PPFIA4O75335 1185 aa25.87■■□□□ 1.73
SFSWAP-204ENST00000535399 FOSBP53539 338 aa25.87■■□□□ 1.73
SFSWAP-204ENST00000535399 HMGN5P82970 282 aaKnown RBP25.87■■□□□ 1.73
SFSWAP-204ENST00000535399 KRT25Q7Z3Z0 450 aa25.87■■□□□ 1.73
SFSWAP-204ENST00000535399 PLA2G4DQ86XP0 818 aa25.87■■□□□ 1.73
SFSWAP-204ENST00000535399 GPR20Q99678 358 aa25.87■■□□□ 1.73
SFSWAP-204ENST00000535399 USP11P51784 963 aa25.86■■□□□ 1.73
SFSWAP-204ENST00000535399 KRT40Q6A162 431 aa25.86■■□□□ 1.73
SFSWAP-204ENST00000535399 SEZ6LQ9BYH1 1024 aa25.86■■□□□ 1.73
SFSWAP-204ENST00000535399 PDLIM7Q9NR12 457 aa25.86■■□□□ 1.73
SFSWAP-204ENST00000535399 F2P00734 622 aa25.85■■□□□ 1.73
SFSWAP-204ENST00000535399 MMP1P03956 469 aa25.85■■□□□ 1.73
SFSWAP-204ENST00000535399 ZNF286BP0CG31 522 aa25.85■■□□□ 1.73
SFSWAP-204ENST00000535399 SYN1P17600 705 aa25.85■■□□□ 1.73
SFSWAP-204ENST00000535399 ITGB3BPQ13352 177 aaPredicted RBP25.85■■□□□ 1.73
SFSWAP-204ENST00000535399 NONOQ15233 471 aaKnown RBP eCLIP25.85■■□□□ 1.739e-7■■■□□ 18.5
SFSWAP-204ENST00000535399 NBPF20Q3BBV1 942 aa25.85■■□□□ 1.73
SFSWAP-204ENST00000535399 FAM126BQ8IXS8 530 aa25.85■■□□□ 1.73
SFSWAP-204ENST00000535399 TNFRSF25Q93038 417 aa25.85■■□□□ 1.73
SFSWAP-204ENST00000535399 LENG9Q96B70 501 aa25.85■■□□□ 1.73
SFSWAP-204ENST00000535399 PCDH10Q9P2E7 1040 aa25.85■■□□□ 1.73
SFSWAP-204ENST00000535399 NFASCO94856 1347 aa25.85■■□□□ 1.73
SFSWAP-204ENST00000535399 MROH7Q68CQ1 1323 aa25.85■■□□□ 1.73
SFSWAP-204ENST00000535399 NOP56O00567 594 aaKnown RBP25.84■■□□□ 1.73
SFSWAP-204ENST00000535399 KRT2P35908 639 aa25.84■■□□□ 1.73
SFSWAP-204ENST00000535399 SP4Q02446 784 aa25.84■■□□□ 1.73
SFSWAP-204ENST00000535399 FAAP100Q0VG06 881 aa25.84■■□□□ 1.73
SFSWAP-204ENST00000535399 TRIM29Q14134 588 aa25.84■■□□□ 1.73
SFSWAP-204ENST00000535399 PRR16Q569H4 304 aa25.84■■□□□ 1.73
SFSWAP-204ENST00000535399 SH3RF1Q7Z6J0 888 aa25.84■■□□□ 1.73
SFSWAP-204ENST00000535399 C16orf70Q9BSU1 422 aa25.84■■□□□ 1.73
SFSWAP-204ENST00000535399 DCDC2CA8MYV0 355 aa25.83■■□□□ 1.73
SFSWAP-204ENST00000535399 CD4P01730 458 aa25.83■■□□□ 1.73
SFSWAP-204ENST00000535399 CLTBP09497 229 aa25.83■■□□□ 1.73
SFSWAP-204ENST00000535399 SETQ01105 290 aaPredicted RBP25.83■■□□□ 1.73
SFSWAP-204ENST00000535399 NR5A1Q13285 461 aa25.83■■□□□ 1.73
SFSWAP-204ENST00000535399 EARS2Q5JPH6 523 aaKnown RBP25.83■■□□□ 1.73
SFSWAP-204ENST00000535399 NFRKBQ6P4R8 1299 aa25.83■■□□□ 1.73
SFSWAP-204ENST00000535399 PPP1R13LQ8WUF5 828 aa25.83■■□□□ 1.73
SFSWAP-204ENST00000535399 SCN10AQ9Y5Y9 1956 aa25.83■■□□□ 1.73
SFSWAP-204ENST00000535399 CYP3A7-CYP3A51PA0A087WV96 503 aa25.82■■□□□ 1.72
SFSWAP-204ENST00000535399 CCDC194A0A1B0GVG4 234 aa25.82■■□□□ 1.72
SFSWAP-204ENST00000535399 TRIM43BA6NCK2 446 aa25.82■■□□□ 1.72
SFSWAP-204ENST00000535399 HAS3O00219 553 aa25.82■■□□□ 1.72
SFSWAP-204ENST00000535399 LGALS2P05162 132 aa25.82■■□□□ 1.72
SFSWAP-204ENST00000535399 CYP3A7P24462 503 aa25.82■■□□□ 1.72
SFSWAP-204ENST00000535399 PSEN2P49810 448 aa25.82■■□□□ 1.72
SFSWAP-204ENST00000535399 INF2Q27J81 1249 aa25.82■■□□□ 1.72
SFSWAP-204ENST00000535399 PIK3AP1Q6ZUJ8 805 aa25.82■■□□□ 1.72
SFSWAP-204ENST00000535399 TRIM43Q96BQ3 446 aaPredicted RBP25.82■■□□□ 1.72
SFSWAP-204ENST00000535399 C8orf76Q96K31 380 aa25.82■■□□□ 1.72
SFSWAP-204ENST00000535399 SDF4Q9BRK5 362 aa25.82■■□□□ 1.72
SFSWAP-204ENST00000535399 BRMS1Q9HCU9 246 aa25.82■■□□□ 1.72
SFSWAP-204ENST00000535399 JPH1Q9HDC5 661 aaPredicted RBP25.82■■□□□ 1.72
SFSWAP-204ENST00000535399 GSTTP1A0A1W2PQM5 241 aa25.81■■□□□ 1.72
SFSWAP-204ENST00000535399 BTBD18B2RXH4 712 aa25.81■■□□□ 1.72
SFSWAP-204ENST00000535399 GUCY1B3Q02153 619 aa25.81■■□□□ 1.72
SFSWAP-204ENST00000535399 MFSD10Q14728 455 aa25.81■■□□□ 1.72
SFSWAP-204ENST00000535399 DIS3L2Q8IYB7 885 aaKnown RBP25.81■■□□□ 1.72
SFSWAP-204ENST00000535399 FAM184AQ8NB25 1140 aa25.81■■□□□ 1.72
SFSWAP-204ENST00000535399 SEPT1Q8WYJ6 367 aa25.81■■□□□ 1.72
SFSWAP-204ENST00000535399 MBOAT7Q96N66 472 aa25.81■■□□□ 1.72
SFSWAP-204ENST00000535399 UIMC1Q96RL1 719 aa25.81■■□□□ 1.72
SFSWAP-204ENST00000535399 KATNAL1Q9BW62 490 aa25.81■■□□□ 1.72
SFSWAP-204ENST00000535399 TRPV6Q9H1D0 765 aa25.81■■□□□ 1.72
SFSWAP-204ENST00000535399 PRDM5Q9NQX1 630 aaPredicted RBP25.81■■□□□ 1.72
SFSWAP-204ENST00000535399 SLC9A2Q9UBY0 812 aa25.81■■□□□ 1.72
SFSWAP-204ENST00000535399 TBX21Q9UL17 535 aa25.81■■□□□ 1.72
SFSWAP-204ENST00000535399 MYH7BA7E2Y1 1941 aa25.8■■□□□ 1.72
SFSWAP-204ENST00000535399 FAM205CA6NFA0 338 aa25.8■■□□□ 1.72
SFSWAP-204ENST00000535399 IPO5O00410 1097 aaKnown RBP25.8■■□□□ 1.72
SFSWAP-204ENST00000535399 KIAA0355O15063 1070 aa25.8■■□□□ 1.72
SFSWAP-204ENST00000535399 TLR3O15455 904 aaKnown RBP25.8■■□□□ 1.72
SFSWAP-204ENST00000535399 DHX15O43143 795 aaKnown RBP25.8■■□□□ 1.72
SFSWAP-204ENST00000535399 B4GALT4O60513 344 aa25.8■■□□□ 1.72
SFSWAP-204ENST00000535399 TDP2O95551 362 aa25.8■■□□□ 1.72
SFSWAP-204ENST00000535399 CHMP4BP1P59074 171 aa25.8■■□□□ 1.72
SFSWAP-204ENST00000535399 MOXD1Q6UVY6 613 aa25.8■■□□□ 1.72
SFSWAP-204ENST00000535399 SESTD1Q86VW0 696 aa25.8■■□□□ 1.72
SFSWAP-204ENST00000535399 FBXO18Q8NFZ0 1043 aa25.8■■□□□ 1.72
SFSWAP-204ENST00000535399 ZNF577Q9BSK1 485 aa25.8■■□□□ 1.72
SFSWAP-204ENST00000535399 TMEM39AQ9NV64 488 aa25.8■■□□□ 1.72
SFSWAP-204ENST00000535399 TCF7P36402 384 aaPredicted RBP25.79■■□□□ 1.72
SFSWAP-204ENST00000535399 PTPN11Q06124 597 aaPredicted RBP25.79■■□□□ 1.72
SFSWAP-204ENST00000535399 KIAA0753Q2KHM9 967 aa25.79■■□□□ 1.72
SFSWAP-204ENST00000535399 Q4G0T1 1027 aa25.79■■□□□ 1.72
SFSWAP-204ENST00000535399 FAM47CQ5HY64 1035 aa25.79■■□□□ 1.72
SFSWAP-204ENST00000535399 UTP14CQ5TAP6 766 aaKnown RBP25.79■■□□□ 1.72
SFSWAP-204ENST00000535399 NEK8Q86SG6 692 aa25.79■■□□□ 1.72
SFSWAP-204ENST00000535399 TRIM50Q86XT4 487 aa25.79■■□□□ 1.72
SFSWAP-204ENST00000535399 PRKAG2Q9UGJ0 569 aa25.79■■□□□ 1.72
SFSWAP-204ENST00000535399 H3BRB1 525 aa25.78■■□□□ 1.72
SFSWAP-204ENST00000535399 MSH4O15457 936 aa25.78■■□□□ 1.72
SFSWAP-204ENST00000535399 CCNE2O96020 404 aa25.78■■□□□ 1.72
SFSWAP-204ENST00000535399 ITGB8P26012 769 aa25.78■■□□□ 1.72
SFSWAP-204ENST00000535399 ACTR2P61160 394 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms