RNA–Protein interactions for RNA: ENST00000535239.5

MSRB3-205, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-205ENST00000535239 HDAC6Q9UBN7 1215 aa17.54■□□□□ 0.4
MSRB3-205ENST00000535239 EIF5BO60841 1220 aaKnown RBP17.53■□□□□ 0.4
MSRB3-205ENST00000535239 FGBP02675 491 aa17.53■□□□□ 0.4
MSRB3-205ENST00000535239 KCNA2P16389 499 aa17.53■□□□□ 0.4
MSRB3-205ENST00000535239 HOXC8P31273 242 aa17.53■□□□□ 0.4
MSRB3-205ENST00000535239 CCL23P55773 120 aa17.53■□□□□ 0.4
MSRB3-205ENST00000535239 BFSP2Q13515 415 aa17.53■□□□□ 0.4
MSRB3-205ENST00000535239 C7orf31Q8N865 590 aa17.53■□□□□ 0.4
MSRB3-205ENST00000535239 NAP1L2Q9ULW6 460 aaPredicted RBP17.53■□□□□ 0.4
MSRB3-205ENST00000535239 TMEM265A0A087WTH1 108 aa17.52■□□□□ 0.4
MSRB3-205ENST00000535239 H3BRB1 525 aa17.52■□□□□ 0.4
MSRB3-205ENST00000535239 ATP9AO75110 1047 aa17.52■□□□□ 0.4
MSRB3-205ENST00000535239 IQCF3P0C7M6 154 aa17.52■□□□□ 0.4
MSRB3-205ENST00000535239 ZNF286BP0CG31 522 aa17.52■□□□□ 0.4
MSRB3-205ENST00000535239 SREBF1P36956 1147 aa17.52■□□□□ 0.4
MSRB3-205ENST00000535239 CCDC12Q8WUD4 166 aaPredicted RBP17.52■□□□□ 0.4
MSRB3-205ENST00000535239 PPP1R13LQ8WUF5 828 aa17.52■□□□□ 0.4
MSRB3-205ENST00000535239 CRYGNQ8WXF5 182 aa17.52■□□□□ 0.4
MSRB3-205ENST00000535239 MXRA8Q9BRK3 442 aa17.52■□□□□ 0.4
MSRB3-205ENST00000535239 TUT1Q9H6E5 874 aaKnown RBP17.52■□□□□ 0.4
MSRB3-205ENST00000535239 NOP56O00567 594 aaKnown RBP17.51■□□□□ 0.39
MSRB3-205ENST00000535239 PARNO95453 639 aaKnown RBP17.51■□□□□ 0.39
MSRB3-205ENST00000535239 LGALS2P05162 132 aa17.51■□□□□ 0.39
MSRB3-205ENST00000535239 ACRP10323 421 aa17.51■□□□□ 0.39
MSRB3-205ENST00000535239 PTK7Q13308 1070 aa17.51■□□□□ 0.39
MSRB3-205ENST00000535239 MTMR1Q13613 665 aa17.51■□□□□ 0.39
MSRB3-205ENST00000535239 CCDC155Q8N6L0 562 aa17.51■□□□□ 0.39
MSRB3-205ENST00000535239 RETREG2Q8NC44 543 aa17.51■□□□□ 0.39
MSRB3-205ENST00000535239 AFAP1L1Q8TED9 768 aa17.51■□□□□ 0.39
MSRB3-205ENST00000535239 SCLYQ96I15 445 aa17.51■□□□□ 0.39
MSRB3-205ENST00000535239 ALG1Q9BT22 464 aa17.51■□□□□ 0.39
MSRB3-205ENST00000535239 ANO3Q9BYT9 981 aa17.51■□□□□ 0.39
MSRB3-205ENST00000535239 MTIF3Q9H2K0 278 aaKnown RBP17.51■□□□□ 0.39
MSRB3-205ENST00000535239 NOD1Q9Y239 953 aa17.51■□□□□ 0.39
MSRB3-205ENST00000535239 MEIS1O00470 390 aa17.5■□□□□ 0.39
MSRB3-205ENST00000535239 SORBS3O60504 671 aa17.5■□□□□ 0.39
MSRB3-205ENST00000535239 CYP3A4P08684 503 aa17.5■□□□□ 0.39
MSRB3-205ENST00000535239 Q7L0L9 218 aa17.5■□□□□ 0.39
MSRB3-205ENST00000535239 NIPA1Q7RTP0 329 aa17.5■□□□□ 0.39
MSRB3-205ENST00000535239 FAM177A1Q8N128 213 aaPredicted RBP17.5■□□□□ 0.39
MSRB3-205ENST00000535239 DHX38Q92620 1227 aaKnown RBP17.5■□□□□ 0.39
MSRB3-205ENST00000535239 PHKBQ93100 1093 aa17.5■□□□□ 0.39
MSRB3-205ENST00000535239 UPF3BQ9BZI7 483 aaKnown RBP17.5■□□□□ 0.39
MSRB3-205ENST00000535239 C6orf50Q9HD87 102 aa17.5■□□□□ 0.39
MSRB3-205ENST00000535239 SH3GLB2Q9NR46 395 aa17.5■□□□□ 0.39
MSRB3-205ENST00000535239 PDRG1Q9NUG6 133 aa17.5■□□□□ 0.39
MSRB3-205ENST00000535239 GNA11P29992 359 aa17.49■□□□□ 0.39
MSRB3-205ENST00000535239 CHMP4BP1P59074 171 aa17.49■□□□□ 0.39
MSRB3-205ENST00000535239 AKAP17AQ02040 695 aaKnown RBP17.49■□□□□ 0.39
MSRB3-205ENST00000535239 HIC1Q14526 733 aa17.49■□□□□ 0.39
MSRB3-205ENST00000535239 TRIM71Q2Q1W2 868 aaKnown RBP17.49■□□□□ 0.39
MSRB3-205ENST00000535239 CEP55Q53EZ4 464 aa17.49■□□□□ 0.39
MSRB3-205ENST00000535239 SEPT1Q8WYJ6 367 aa17.49■□□□□ 0.39
MSRB3-205ENST00000535239 NCOA5Q9HCD5 579 aaKnown RBP17.49■□□□□ 0.39
MSRB3-205ENST00000535239 KCNH7Q9NS40 1196 aa17.49■□□□□ 0.39
MSRB3-205ENST00000535239 DOCK5Q9H7D0 1870 aa17.49■□□□□ 0.39
MSRB3-205ENST00000535239 NFASCO94856 1347 aa17.48■□□□□ 0.39
MSRB3-205ENST00000535239 TANC1Q9C0D5 1861 aa17.48■□□□□ 0.39
MSRB3-205ENST00000535239 COL6A3P12111 3177 aa17.48■□□□□ 0.39
MSRB3-205ENST00000535239 GSTTP1A0A1W2PQM5 241 aa17.48■□□□□ 0.39
MSRB3-205ENST00000535239 SELPP16109 830 aa17.48■□□□□ 0.39
MSRB3-205ENST00000535239 CCT2P78371 535 aaKnown RBP17.48■□□□□ 0.39
MSRB3-205ENST00000535239 ADAM17P78536 824 aa17.48■□□□□ 0.39
MSRB3-205ENST00000535239 GPNMBQ14956 572 aa17.48■□□□□ 0.39
MSRB3-205ENST00000535239 ZNF697Q5TEC3 545 aa17.48■□□□□ 0.39
MSRB3-205ENST00000535239 SERINC5Q86VE9 423 aa17.48■□□□□ 0.39
MSRB3-205ENST00000535239 CYP2W1Q8TAV3 490 aa17.48■□□□□ 0.39
MSRB3-205ENST00000535239 BICD2Q8TD16 824 aa17.48■□□□□ 0.39
MSRB3-205ENST00000535239 SEMA6BQ9H3T3 888 aa17.48■□□□□ 0.39
MSRB3-205ENST00000535239 RNPEPQ9H4A4 650 aa17.48■□□□□ 0.39
MSRB3-205ENST00000535239 TMEM260Q9NX78 707 aa17.48■□□□□ 0.39
MSRB3-205ENST00000535239 CXXC1Q9P0U4 656 aaPredicted RBP17.48■□□□□ 0.39
MSRB3-205ENST00000535239 ZNF215Q9UL58 517 aaPredicted RBP17.48■□□□□ 0.39
MSRB3-205ENST00000535239 STXBP5LQ9Y2K9 1186 aa17.48■□□□□ 0.39
MSRB3-205ENST00000535239 TELO2Q9Y4R8 837 aa17.48■□□□□ 0.39
MSRB3-205ENST00000535239 TRIP12Q14669 1992 aaPredicted RBP17.48■□□□□ 0.39
MSRB3-205ENST00000535239 C17orf102A2RUQ5 167 aa17.47■□□□□ 0.39
MSRB3-205ENST00000535239 CKBP12277 381 aa17.47■□□□□ 0.39
MSRB3-205ENST00000535239 ARHGAP4P98171 946 aa17.47■□□□□ 0.39
MSRB3-205ENST00000535239 TRAF7Q6Q0C0 670 aa17.47■□□□□ 0.39
MSRB3-205ENST00000535239 OTOP2Q7RTS6 562 aa17.47■□□□□ 0.39
MSRB3-205ENST00000535239 REXO1Q8N1G1 1221 aaKnown RBP17.47■□□□□ 0.39
MSRB3-205ENST00000535239 CCDC148Q8NFR7 591 aa17.47■□□□□ 0.39
MSRB3-205ENST00000535239 PGBD1Q96JS3 809 aa17.47■□□□□ 0.39
MSRB3-205ENST00000535239 SLC26A6Q9BXS9 759 aa17.47■□□□□ 0.39
MSRB3-205ENST00000535239 SCN5AQ14524 2016 aa17.47■□□□□ 0.39
MSRB3-205ENST00000535239 ADAMTS3O15072 1205 aa17.46■□□□□ 0.39
MSRB3-205ENST00000535239 LGR5O75473 907 aa17.46■□□□□ 0.39
MSRB3-205ENST00000535239 CXCL10P02778 98 aa17.46■□□□□ 0.39
MSRB3-205ENST00000535239 SMIM10L2AP0DMW4 78 aa17.46■□□□□ 0.39
MSRB3-205ENST00000535239 SMIM10L2BP0DMW5 78 aa17.46■□□□□ 0.39
MSRB3-205ENST00000535239 ARP10275 920 aa17.46■□□□□ 0.39
MSRB3-205ENST00000535239 GNAT1P11488 350 aa17.46■□□□□ 0.39
MSRB3-205ENST00000535239 DNAJB2P25686 324 aa17.46■□□□□ 0.39
MSRB3-205ENST00000535239 TCF7P36402 384 aaPredicted RBP17.46■□□□□ 0.39
MSRB3-205ENST00000535239 ZNF200P98182 395 aaPredicted RBP17.46■□□□□ 0.39
MSRB3-205ENST00000535239 SSRP1Q08945 709 aaKnown RBP17.46■□□□□ 0.39
MSRB3-205ENST00000535239 JAKMIP3Q5VZ66 844 aa17.46■□□□□ 0.39
MSRB3-205ENST00000535239 LRRC8DQ7L1W4 858 aa17.46■□□□□ 0.39
MSRB3-205ENST00000535239 TRIM22Q8IYM9 498 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms