RNA–Protein interactions for RNA: ENST00000534669.1

GEN1-207, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 2

Gene GEN1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-207ENST00000534669 NEDD4P46934 1319 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 WDR19Q8NEZ3 1342 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 LOC102724159A0A0B4J2E5 919 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 LINC01553A4QN01 128 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 NKRFO15226 690 aaKnown RBP eCLIP8.36□□□□□ -1.07
GEN1-207ENST00000534669 SORBS3O60504 671 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 BAIAP3O94812 1187 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 CXCL10P02778 98 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 NEFLP07196 543 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 ZNF286BP0CG31 522 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 GGCXP38435 758 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 PTPN11Q06124 597 aaPredicted RBP8.36□□□□□ -1.07
GEN1-207ENST00000534669 PWP2Q15269 919 aaKnown RBP8.36□□□□□ -1.07
GEN1-207ENST00000534669 ALX1Q15699 326 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 PPP1R18Q6NYC8 613 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 FAM117BQ6P1L5 589 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 BLOC1S3Q6QNY0 202 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.36□□□□□ -1.07
GEN1-207ENST00000534669 SEPT14Q6ZU15 432 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 CHST3Q7LGC8 479 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 SESTD1Q86VW0 696 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 SYTL5Q8TDW5 730 aaPredicted RBP8.36□□□□□ -1.07
GEN1-207ENST00000534669 ZKSCAN3Q9BRR0 538 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 TOMM22Q9NS69 142 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 TCP11L1Q9NUJ3 509 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 HDAC6Q9UBN7 1215 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 NOD1Q9Y239 953 aa8.36□□□□□ -1.07
GEN1-207ENST00000534669 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.35□□□□□ -1.07
GEN1-207ENST00000534669 OPLAHO14841 1288 aa8.35□□□□□ -1.07
GEN1-207ENST00000534669 KPNA6O60684 536 aa8.35□□□□□ -1.07
GEN1-207ENST00000534669 GJB5O95377 273 aa8.35□□□□□ -1.07
GEN1-207ENST00000534669 HSPD1P10809 573 aaKnown RBP8.35□□□□□ -1.07
GEN1-207ENST00000534669 CKBP12277 381 aa8.35□□□□□ -1.07
GEN1-207ENST00000534669 IL9P15248 144 aa8.35□□□□□ -1.07
GEN1-207ENST00000534669 SELPP16109 830 aa8.35□□□□□ -1.07
GEN1-207ENST00000534669 KCNJ6P48051 423 aa8.35□□□□□ -1.07
GEN1-207ENST00000534669 ERVK-21P61565 698 aa8.35□□□□□ -1.07
GEN1-207ENST00000534669 RBL2Q08999 1139 aa8.35□□□□□ -1.07
GEN1-207ENST00000534669 NMIQ13287 307 aaPredicted RBP8.35□□□□□ -1.07
GEN1-207ENST00000534669 BFSP2Q13515 415 aa8.35□□□□□ -1.07
GEN1-207ENST00000534669 CDC37Q16543 378 aaPredicted RBP8.35□□□□□ -1.07
GEN1-207ENST00000534669 LRRFIP1Q32MZ4 808 aaKnown RBP8.35□□□□□ -1.07
GEN1-207ENST00000534669 TMEM31Q5JXX7 168 aa8.35□□□□□ -1.07
GEN1-207ENST00000534669 CNKSR3Q6P9H4 555 aa8.35□□□□□ -1.07
GEN1-207ENST00000534669 DNERQ8NFT8 737 aa8.35□□□□□ -1.07
GEN1-207ENST00000534669 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.35□□□□□ -1.07
GEN1-207ENST00000534669 AFAP1L1Q8TED9 768 aa8.35□□□□□ -1.07
GEN1-207ENST00000534669 ANKS1AQ92625 1134 aa8.35□□□□□ -1.07
GEN1-207ENST00000534669 C17orf80Q9BSJ5 609 aa8.35□□□□□ -1.07
GEN1-207ENST00000534669 ALG1Q9BT22 464 aa8.35□□□□□ -1.07
GEN1-207ENST00000534669 TMUB1Q9BVT8 246 aa8.35□□□□□ -1.07
GEN1-207ENST00000534669 IRX2Q9BZI1 471 aaPredicted RBP8.35□□□□□ -1.07
GEN1-207ENST00000534669 UBE2ZQ9H832 354 aaPredicted RBP8.35□□□□□ -1.07
GEN1-207ENST00000534669 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.35□□□□□ -1.07
GEN1-207ENST00000534669 GTF2IRD1Q9UHL9 959 aa8.35□□□□□ -1.07
GEN1-207ENST00000534669 RAD50Q92878 1312 aa8.34□□□□□ -1.07
GEN1-207ENST00000534669 PIEZO1Q92508 2521 aa8.34□□□□□ -1.07
GEN1-207ENST00000534669 BAZ2BQ9UIF8 2168 aaKnown RBP8.34□□□□□ -1.07
GEN1-207ENST00000534669 KIF28PB7ZC32 967 aa8.34□□□□□ -1.07
GEN1-207ENST00000534669 PI4K2BG5E9Z4 385 aa8.34□□□□□ -1.07
GEN1-207ENST00000534669 HAS3O00219 553 aa8.34□□□□□ -1.07
GEN1-207ENST00000534669 GPR37L1O60883 481 aa8.34□□□□□ -1.07
GEN1-207ENST00000534669 GH1P01241 217 aa8.34□□□□□ -1.07
GEN1-207ENST00000534669 EIF2AK2P19525 551 aaKnown RBP8.34□□□□□ -1.07
GEN1-207ENST00000534669 BRDTQ58F21 947 aaPredicted RBP8.34□□□□□ -1.07
GEN1-207ENST00000534669 ZNF618Q5T7W0 954 aa8.34□□□□□ -1.07
GEN1-207ENST00000534669 IL31RAQ8NI17 732 aa8.34□□□□□ -1.07
GEN1-207ENST00000534669 CAGE1Q8TC20 777 aa8.34□□□□□ -1.07
GEN1-207ENST00000534669 GPKOWQ92917 476 aaPredicted RBP eCLIP8.34□□□□□ -1.07
GEN1-207ENST00000534669 PHOX2BQ99453 314 aa8.34□□□□□ -1.07
GEN1-207ENST00000534669 BCAS3Q9H6U6 928 aa8.34□□□□□ -1.07
GEN1-207ENST00000534669 HELLSQ9NRZ9 838 aa8.34□□□□□ -1.07
GEN1-207ENST00000534669 DDX41Q9UJV9 622 aaKnown RBP8.34□□□□□ -1.07
GEN1-207ENST00000534669 ZNF318Q5VUA4 2279 aa8.33□□□□□ -1.08
GEN1-207ENST00000534669 PPP1R11O60927 126 aaPredicted RBP8.33□□□□□ -1.08
GEN1-207ENST00000534669 NR1I2O75469 434 aa8.33□□□□□ -1.08
GEN1-207ENST00000534669 LGR5O75473 907 aa8.33□□□□□ -1.08
GEN1-207ENST00000534669 F2P00734 622 aa8.33□□□□□ -1.08
GEN1-207ENST00000534669 KCNA5P22460 613 aa8.33□□□□□ -1.08
GEN1-207ENST00000534669 PDE1AP54750 535 aa8.33□□□□□ -1.08
GEN1-207ENST00000534669 KIAA0753Q2KHM9 967 aa8.33□□□□□ -1.08
GEN1-207ENST00000534669 SLC35G1Q2M3R5 365 aa8.33□□□□□ -1.08
GEN1-207ENST00000534669 RALGAPA2Q2PPJ7 1873 aa8.33□□□□□ -1.08
GEN1-207ENST00000534669 QRICH1Q2TAL8 776 aa8.33□□□□□ -1.08
GEN1-207ENST00000534669 MCMDC2Q4G0Z9 681 aa8.33□□□□□ -1.08
GEN1-207ENST00000534669 FAM178BQ8IXR5 827 aa8.33□□□□□ -1.08
GEN1-207ENST00000534669 ADGRF4Q8IZF3 695 aa8.33□□□□□ -1.08
GEN1-207ENST00000534669 RGS22Q8NE09 1264 aa8.33□□□□□ -1.08
GEN1-207ENST00000534669 EVI5LQ96CN4 794 aa8.33□□□□□ -1.08
GEN1-207ENST00000534669 TGS1Q96RS0 853 aaKnown RBP8.33□□□□□ -1.08
GEN1-207ENST00000534669 RAD9AQ99638 391 aa8.33□□□□□ -1.08
GEN1-207ENST00000534669 HCN4Q9Y3Q4 1203 aa8.33□□□□□ -1.08
GEN1-207ENST00000534669 TELO2Q9Y4R8 837 aa8.33□□□□□ -1.08
GEN1-207ENST00000534669 KIAA1671Q9BY89 1806 aa8.33□□□□□ -1.08
GEN1-207ENST00000534669 COL4A6Q14031 1691 aa8.33□□□□□ -1.08
GEN1-207ENST00000534669 ZMYM6O95789 1325 aa8.32□□□□□ -1.08
GEN1-207ENST00000534669 CCDC171Q6TFL3 1326 aa8.32□□□□□ -1.08
GEN1-207ENST00000534669 ABHD14A-ACY1A0A1B0GW23 586 aa8.32□□□□□ -1.08
GEN1-207ENST00000534669 H3BQ06 376 aaPredicted RBP8.32□□□□□ -1.08
GEN1-207ENST00000534669 CASTP20810 708 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms