RNA–Protein interactions for RNA: ENST00000534276.5

CHRDL2-209, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-209ENST00000534276 CTCFLQ8NI51 663 aaPredicted RBP14.07□□□□□ -0.16
CHRDL2-209ENST00000534276 RNF26Q9BY78 433 aaPredicted RBP14.07□□□□□ -0.16
CHRDL2-209ENST00000534276 RIOX1Q9H6W3 641 aa14.07□□□□□ -0.16
CHRDL2-209ENST00000534276 MAP3K20Q9NYL2 800 aaKnown RBP14.07□□□□□ -0.16
CHRDL2-209ENST00000534276 DDX41Q9UJV9 622 aaKnown RBP14.07□□□□□ -0.16
CHRDL2-209ENST00000534276 VPS37CA5D8V6 355 aaPredicted RBP14.07□□□□□ -0.16
CHRDL2-209ENST00000534276 CYTH3O43739 400 aa14.07□□□□□ -0.16
CHRDL2-209ENST00000534276 HOXA13P31271 388 aaPredicted RBP14.07□□□□□ -0.16
CHRDL2-209ENST00000534276 RAB30Q15771 203 aa14.07□□□□□ -0.16
CHRDL2-209ENST00000534276 HOMER1Q86YM7 354 aa14.07□□□□□ -0.16
CHRDL2-209ENST00000534276 SAMD3Q8N6K7 520 aa14.07□□□□□ -0.16
CHRDL2-209ENST00000534276 FBXO18Q8NFZ0 1043 aa14.07□□□□□ -0.16
CHRDL2-209ENST00000534276 PIGSQ96S52 555 aa14.07□□□□□ -0.16
CHRDL2-209ENST00000534276 LZTS2Q9BRK4 669 aa14.07□□□□□ -0.16
CHRDL2-209ENST00000534276 MSRAQ9UJ68 235 aa14.07□□□□□ -0.16
CHRDL2-209ENST00000534276 DEXIO95424 95 aa14.06□□□□□ -0.16
CHRDL2-209ENST00000534276 PFKMP08237 780 aa14.06□□□□□ -0.16
CHRDL2-209ENST00000534276 CHMP4BP1P59074 171 aa14.06□□□□□ -0.16
CHRDL2-209ENST00000534276 TRAF1Q13077 416 aa14.06□□□□□ -0.16
CHRDL2-209ENST00000534276 NBR1Q14596 966 aa14.06□□□□□ -0.16
CHRDL2-209ENST00000534276 FAM177A1Q8N128 213 aaPredicted RBP14.06□□□□□ -0.16
CHRDL2-209ENST00000534276 TMEM87AQ8NBN3 555 aa14.06□□□□□ -0.16
CHRDL2-209ENST00000534276 KAT2BQ92831 832 aa14.06□□□□□ -0.16
CHRDL2-209ENST00000534276 C8orf76Q96K31 380 aa14.06□□□□□ -0.16
CHRDL2-209ENST00000534276 PDCD2LQ9BRP1 358 aa14.06□□□□□ -0.16
CHRDL2-209ENST00000534276 MRVI1Q9Y6F6 885 aa14.06□□□□□ -0.16
CHRDL2-209ENST00000534276 SLC4A7Q9Y6M7 1214 aa14.06□□□□□ -0.16
CHRDL2-209ENST00000534276 MYO9BQ13459 2157 aa14.05□□□□□ -0.16
CHRDL2-209ENST00000534276 A0A0C4DFX4 3053 aa14.05□□□□□ -0.16
CHRDL2-209ENST00000534276 PNMA6FA0A0J9YX94 578 aa14.05□□□□□ -0.16
CHRDL2-209ENST00000534276 PITPNM1O00562 1244 aa14.05□□□□□ -0.16
CHRDL2-209ENST00000534276 PRPF3O43395 683 aaKnown RBP14.05□□□□□ -0.16
CHRDL2-209ENST00000534276 RGS20O76081 388 aa14.05□□□□□ -0.16
CHRDL2-209ENST00000534276 IQCF3P0C7M6 154 aa14.05□□□□□ -0.16
CHRDL2-209ENST00000534276 MYCLP12524 364 aaPredicted RBP14.05□□□□□ -0.16
CHRDL2-209ENST00000534276 LAMC2Q13753 1193 aa14.05□□□□□ -0.16
CHRDL2-209ENST00000534276 DGKDQ16760 1214 aa14.05□□□□□ -0.16
CHRDL2-209ENST00000534276 DEFB128Q7Z7B8 93 aa14.05□□□□□ -0.16
CHRDL2-209ENST00000534276 VSIG10LQ86VR7 867 aa14.05□□□□□ -0.16
CHRDL2-209ENST00000534276 SESTD1Q86VW0 696 aa14.05□□□□□ -0.16
CHRDL2-209ENST00000534276 RETREG2Q8NC44 543 aa14.05□□□□□ -0.16
CHRDL2-209ENST00000534276 EMID1Q96A84 441 aaPredicted RBP14.05□□□□□ -0.16
CHRDL2-209ENST00000534276 MYL10Q9BUA6 226 aa14.05□□□□□ -0.16
CHRDL2-209ENST00000534276 COL25A1Q9BXS0 654 aaPredicted RBP14.05□□□□□ -0.16
CHRDL2-209ENST00000534276 NOD1Q9Y239 953 aa14.05□□□□□ -0.16
CHRDL2-209ENST00000534276 YBX2Q9Y2T7 364 aaKnown RBP14.05□□□□□ -0.16
CHRDL2-209ENST00000534276 ZBBXA8MT70 800 aa14.04□□□□□ -0.16
CHRDL2-209ENST00000534276 GCOM1H8Y6P7 765 aaPredicted RBP14.04□□□□□ -0.16
CHRDL2-209ENST00000534276 POLR2MP0CAP2 368 aa14.04□□□□□ -0.16
CHRDL2-209ENST00000534276 XBP1P17861 261 aa14.04□□□□□ -0.16
CHRDL2-209ENST00000534276 RXRAP19793 462 aa14.04□□□□□ -0.16
CHRDL2-209ENST00000534276 RFC2P35250 354 aa14.04□□□□□ -0.16
CHRDL2-209ENST00000534276 AKAP17AQ02040 695 aaKnown RBP14.04□□□□□ -0.16
CHRDL2-209ENST00000534276 FUT2Q10981 343 aa14.04□□□□□ -0.16
CHRDL2-209ENST00000534276 RESTQ13127 1097 aa14.04□□□□□ -0.16
CHRDL2-209ENST00000534276 BFSP2Q13515 415 aa14.04□□□□□ -0.16
CHRDL2-209ENST00000534276 PGM5Q15124 567 aa14.04□□□□□ -0.16
CHRDL2-209ENST00000534276 PTGISQ16647 500 aa14.04□□□□□ -0.16
CHRDL2-209ENST00000534276 MCTP1Q6DN14 999 aa14.04□□□□□ -0.16
CHRDL2-209ENST00000534276 TMTC3Q6ZXV5 915 aa14.04□□□□□ -0.16
CHRDL2-209ENST00000534276 IL31RAQ8NI17 732 aa14.04□□□□□ -0.16
CHRDL2-209ENST00000534276 PPTC7Q8NI37 304 aa14.04□□□□□ -0.16
CHRDL2-209ENST00000534276 CTAGE1Q96RT6 745 aa14.04□□□□□ -0.16
CHRDL2-209ENST00000534276 ALG1Q9BT22 464 aa14.04□□□□□ -0.16
CHRDL2-209ENST00000534276 NKX2-4Q9H2Z4 354 aa14.04□□□□□ -0.16
CHRDL2-209ENST00000534276 BAZ2BQ9UIF8 2168 aaKnown RBP14.03□□□□□ -0.16
CHRDL2-209ENST00000534276 ATP2A2P16615 1042 aaKnown RBP14.03□□□□□ -0.16
CHRDL2-209ENST00000534276 RABGGTBP53611 331 aa14.03□□□□□ -0.16
CHRDL2-209ENST00000534276 TRIM29Q14134 588 aa14.03□□□□□ -0.16
CHRDL2-209ENST00000534276 GDF6Q6KF10 455 aaPredicted RBP14.03□□□□□ -0.16
CHRDL2-209ENST00000534276 KCNV1Q6PIU1 500 aa14.03□□□□□ -0.16
CHRDL2-209ENST00000534276 BRAPQ7Z569 592 aa14.03□□□□□ -0.16
CHRDL2-209ENST00000534276 FCHSD1Q86WN1 690 aa14.03□□□□□ -0.16
CHRDL2-209ENST00000534276 DHX37Q8IY37 1157 aaKnown RBP14.03□□□□□ -0.16
CHRDL2-209ENST00000534276 GAS2L1Q99501 681 aaPredicted RBP14.03□□□□□ -0.16
CHRDL2-209ENST00000534276 SLC26A6Q9BXS9 759 aa14.03□□□□□ -0.16
CHRDL2-209ENST00000534276 PRDM12Q9H4Q4 367 aa14.03□□□□□ -0.16
CHRDL2-209ENST00000534276 SLC28A3Q9HAS3 691 aa14.03□□□□□ -0.16
CHRDL2-209ENST00000534276 LMBRD1Q9NUN5 540 aa14.03□□□□□ -0.16
CHRDL2-209ENST00000534276 MYH6P13533 1939 aa14.03□□□□□ -0.16
CHRDL2-209ENST00000534276 TRAK2O60296 914 aa14.02□□□□□ -0.16
CHRDL2-209ENST00000534276 ACTN1P12814 892 aa14.02□□□□□ -0.16
CHRDL2-209ENST00000534276 HOXD8P13378 290 aaPredicted RBP14.02□□□□□ -0.16
CHRDL2-209ENST00000534276 PSEN2P49810 448 aa14.02□□□□□ -0.16
CHRDL2-209ENST00000534276 KRT85P78386 507 aa14.02□□□□□ -0.16
CHRDL2-209ENST00000534276 CELF3Q5SZQ8 465 aaKnown RBP14.02□□□□□ -0.16
CHRDL2-209ENST00000534276 MYSM1Q5VVJ2 828 aa14.02□□□□□ -0.16
CHRDL2-209ENST00000534276 RAB11FIP4Q86YS3 637 aa14.02□□□□□ -0.16
CHRDL2-209ENST00000534276 USP38Q8NB14 1042 aa14.02□□□□□ -0.16
CHRDL2-209ENST00000534276 CAGE1Q8TC20 777 aa14.02□□□□□ -0.16
CHRDL2-209ENST00000534276 SCAND2PQ9GZW5 306 aaPredicted RBP14.02□□□□□ -0.16
CHRDL2-209ENST00000534276 CFAP45Q9UL16 551 aa14.02□□□□□ -0.16
CHRDL2-209ENST00000534276 PCDHA11Q9Y5I1 949 aa14.02□□□□□ -0.16
CHRDL2-209ENST00000534276 HAS3O00219 553 aa14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 PPFIA4O75335 1185 aa14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 F2P00734 622 aa14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 ZNF286BP0CG31 522 aa14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 TGFB3P10600 412 aa14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 MYOGP15173 224 aa14.01□□□□□ -0.17
CHRDL2-209ENST00000534276 UBA1P22314 1058 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms