RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 SYT3Q9BQG1 590 aa5.98□□□□□ -1.45
ATPAF1-211ENST00000534216 GORASP1Q9BQQ3 440 aa5.98□□□□□ -1.45
ATPAF1-211ENST00000534216 MRPL4Q9BYD3 311 aaKnown RBP5.98□□□□□ -1.45
ATPAF1-211ENST00000534216 NGRNQ9NPE2 291 aaKnown RBP5.98□□□□□ -1.45
ATPAF1-211ENST00000534216 DTLQ9NZJ0 730 aa5.98□□□□□ -1.45
ATPAF1-211ENST00000534216 NDOR1Q9UHB4 597 aa5.98□□□□□ -1.45
ATPAF1-211ENST00000534216 FFAR3O14843 346 aa5.97□□□□□ -1.45
ATPAF1-211ENST00000534216 NKX3-2P78367 333 aa5.97□□□□□ -1.45
ATPAF1-211ENST00000534216 DLX2Q07687 328 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-211ENST00000534216 SAPCD2Q86UD0 394 aa5.97□□□□□ -1.45
ATPAF1-211ENST00000534216 RBM12BQ8IXT5 1001 aaKnown RBP5.97□□□□□ -1.45
ATPAF1-211ENST00000534216 LINC00482Q8N8I6 264 aa5.97□□□□□ -1.45
ATPAF1-211ENST00000534216 TP53I13Q8NBR0 393 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-211ENST00000534216 SH3TC2Q8TF17 1288 aa5.97□□□□□ -1.45
ATPAF1-211ENST00000534216 CLEC4DQ8WXI8 215 aa5.97□□□□□ -1.45
ATPAF1-211ENST00000534216 ZBTB8AQ96BR9 441 aa5.97□□□□□ -1.45
ATPAF1-211ENST00000534216 C11orf84Q9BUA3 381 aaPredicted RBP5.97□□□□□ -1.45
ATPAF1-211ENST00000534216 KANSL2Q9H9L4 492 aa5.97□□□□□ -1.45
ATPAF1-211ENST00000534216 NCOA5Q9HCD5 579 aaKnown RBP5.97□□□□□ -1.45
ATPAF1-211ENST00000534216 SFMBT1Q9UHJ3 866 aa5.97□□□□□ -1.45
ATPAF1-211ENST00000534216 DSEQ9UL01 958 aa5.97□□□□□ -1.45
ATPAF1-211ENST00000534216 KCNQ2O43526 872 aa5.96□□□□□ -1.46
ATPAF1-211ENST00000534216 TRIM13O60858 407 aa5.96□□□□□ -1.46
ATPAF1-211ENST00000534216 LRG1P02750 347 aa5.96□□□□□ -1.46
ATPAF1-211ENST00000534216 ITGA1P56199 1179 aa5.96□□□□□ -1.46
ATPAF1-211ENST00000534216 TUSC3Q13454 348 aa5.96□□□□□ -1.46
ATPAF1-211ENST00000534216 FBLN7Q53RD9 439 aa5.96□□□□□ -1.46
ATPAF1-211ENST00000534216 TEPPQ6URK8 271 aa5.96□□□□□ -1.46
ATPAF1-211ENST00000534216 TTLL11Q8NHH1 800 aa5.96□□□□□ -1.46
ATPAF1-211ENST00000534216 ZNF526Q8TF50 670 aaPredicted RBP5.96□□□□□ -1.46
ATPAF1-211ENST00000534216 FBXW5Q969U6 566 aa5.96□□□□□ -1.46
ATPAF1-211ENST00000534216 SCLYQ96I15 445 aa5.96□□□□□ -1.46
ATPAF1-211ENST00000534216 PDGFDQ9GZP0 370 aaPredicted RBP5.96□□□□□ -1.46
ATPAF1-211ENST00000534216 NUB1Q9Y5A7 615 aa5.96□□□□□ -1.46
ATPAF1-211ENST00000534216 ADAMTS20P59510 1910 aa5.95□□□□□ -1.46
ATPAF1-211ENST00000534216 TCRBV5S4A2TA0A5A2 114 aa5.95□□□□□ -1.46
ATPAF1-211ENST00000534216 SH3D21A4FU49 640 aa5.95□□□□□ -1.46
ATPAF1-211ENST00000534216 RASGRP1O95267 797 aa5.95□□□□□ -1.46
ATPAF1-211ENST00000534216 LTFP02788 710 aa5.95□□□□□ -1.46
ATPAF1-211ENST00000534216 SRGAP2CP0DJJ0 459 aa5.95□□□□□ -1.46
ATPAF1-211ENST00000534216 SMAD4Q13485 552 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-211ENST00000534216 C16orf59Q7L2K0 433 aa5.95□□□□□ -1.46
ATPAF1-211ENST00000534216 STK32CQ86UX6 486 aa5.95□□□□□ -1.46
ATPAF1-211ENST00000534216 ZC3H7AQ8IWR0 971 aaKnown RBP5.95□□□□□ -1.46
ATPAF1-211ENST00000534216 ADGRG2Q8IZP9 1017 aa5.95□□□□□ -1.46
ATPAF1-211ENST00000534216 MARCH10Q8NA82 808 aaPredicted RBP5.95□□□□□ -1.46
ATPAF1-211ENST00000534216 KYQ8NBH2 561 aa5.95□□□□□ -1.46
ATPAF1-211ENST00000534216 SH3RF2Q8TEC5 729 aa5.95□□□□□ -1.46
ATPAF1-211ENST00000534216 MAGEB10Q96LZ2 347 aaPredicted RBP5.95□□□□□ -1.46
ATPAF1-211ENST00000534216 CATSPERZQ9NTU4 200 aa5.95□□□□□ -1.46
ATPAF1-211ENST00000534216 SPATA6Q9NWH7 488 aaPredicted RBP5.95□□□□□ -1.46
ATPAF1-211ENST00000534216 HSPBP1Q9NZL4 362 aa5.95□□□□□ -1.46
ATPAF1-211ENST00000534216 TELO2Q9Y4R8 837 aa5.95□□□□□ -1.46
ATPAF1-211ENST00000534216 A0A1B0GTL3 188 aa5.94□□□□□ -1.46
ATPAF1-211ENST00000534216 PLD2O14939 933 aa5.94□□□□□ -1.46
ATPAF1-211ENST00000534216 RAPGEF3O95398 923 aa5.94□□□□□ -1.46
ATPAF1-211ENST00000534216 PYGMP11217 842 aa5.94□□□□□ -1.46
ATPAF1-211ENST00000534216 PDE6AP16499 860 aa5.94□□□□□ -1.46
ATPAF1-211ENST00000534216 BMP7P18075 431 aa5.94□□□□□ -1.46
ATPAF1-211ENST00000534216 EPHA5P54756 1037 aa5.94□□□□□ -1.46
ATPAF1-211ENST00000534216 GRIN1Q05586 938 aa5.94□□□□□ -1.46
ATPAF1-211ENST00000534216 GPR19Q15760 415 aa5.94□□□□□ -1.46
ATPAF1-211ENST00000534216 LIPIQ6XZB0 460 aa5.94□□□□□ -1.46
ATPAF1-211ENST00000534216 ARHGAP36Q6ZRI8 547 aa5.94□□□□□ -1.46
ATPAF1-211ENST00000534216 KCTD1Q719H9 257 aa5.94□□□□□ -1.46
ATPAF1-211ENST00000534216 BRAPQ7Z569 592 aa5.94□□□□□ -1.46
ATPAF1-211ENST00000534216 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.94□□□□□ -1.46
ATPAF1-211ENST00000534216 TTLL6Q8N841 843 aa5.94□□□□□ -1.46
ATPAF1-211ENST00000534216 RNPC3Q96LT9 517 aaKnown RBP5.94□□□□□ -1.46
ATPAF1-211ENST00000534216 KCNC2Q96PR1 638 aa5.94□□□□□ -1.46
ATPAF1-211ENST00000534216 TRIM39Q9HCM9 518 aa5.94□□□□□ -1.46
ATPAF1-211ENST00000534216 TMEM260Q9NX78 707 aa5.94□□□□□ -1.46
ATPAF1-211ENST00000534216 CBLCQ9ULV8 474 aa5.94□□□□□ -1.46
ATPAF1-211ENST00000534216 CCDC66A2RUB6 948 aa5.93□□□□□ -1.46
ATPAF1-211ENST00000534216 GSTA4O15217 222 aa5.93□□□□□ -1.46
ATPAF1-211ENST00000534216 AMY2AP04746 511 aa5.93□□□□□ -1.46
ATPAF1-211ENST00000534216 CKMP06732 381 aa5.93□□□□□ -1.46
ATPAF1-211ENST00000534216 AMY2BP19961 511 aa5.93□□□□□ -1.46
ATPAF1-211ENST00000534216 THBS2P35442 1172 aa5.93□□□□□ -1.46
ATPAF1-211ENST00000534216 ST5P78524 1137 aa5.93□□□□□ -1.46
ATPAF1-211ENST00000534216 ADAM9Q13443 819 aa5.93□□□□□ -1.46
ATPAF1-211ENST00000534216 FAM47CQ5HY64 1035 aa5.93□□□□□ -1.46
ATPAF1-211ENST00000534216 FGD2Q7Z6J4 655 aa5.93□□□□□ -1.46
ATPAF1-211ENST00000534216 OSTM1Q86WC4 334 aa5.93□□□□□ -1.46
ATPAF1-211ENST00000534216 CD244Q9BZW8 370 aa5.93□□□□□ -1.46
ATPAF1-211ENST00000534216 LUC7LQ9NQ29 371 aaKnown RBP5.93□□□□□ -1.46
ATPAF1-211ENST00000534216 NTMQ9P121 344 aa5.93□□□□□ -1.46
ATPAF1-211ENST00000534216 SRPK3Q9UPE1 567 aa5.93□□□□□ -1.46
ATPAF1-211ENST00000534216 WASF3Q9UPY6 502 aa5.93□□□□□ -1.46
ATPAF1-211ENST00000534216 TCRBV16S1A1N1A0A5B0 115 aa5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 ESYT3A0FGR9 886 aa5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 ZNF561-AS1K7EIQ3 104 aa5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 MAN2B1O00754 1011 aa5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 SMARCA5O60264 1052 aaPredicted RBP5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 APPP05067 770 aa5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 FAHP16930 419 aa5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 DNM2P50570 870 aa5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 SLURP1P55000 103 aa5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 CRY1Q16526 586 aa5.92□□□□□ -1.46
ATPAF1-211ENST00000534216 PAN2Q504Q3 1202 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms