RNA–Protein interactions for RNA: ENST00000533915.5

CMTM1-218, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 899 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-218ENST00000533915 KBTBD13C9JR72 458 aa15.92■□□□□ 0.14
CMTM1-218ENST00000533915 MSH4O15457 936 aa15.92■□□□□ 0.14
CMTM1-218ENST00000533915 BRD1O95696 1058 aa15.92■□□□□ 0.14
CMTM1-218ENST00000533915 MYCNP04198 464 aaPredicted RBP15.92■□□□□ 0.14
CMTM1-218ENST00000533915 GJA8P48165 433 aa15.92■□□□□ 0.14
CMTM1-218ENST00000533915 KRT76Q01546 638 aa15.92■□□□□ 0.14
CMTM1-218ENST00000533915 SEMA3FQ13275 785 aa15.92■□□□□ 0.14
CMTM1-218ENST00000533915 ZNF174Q15697 407 aa15.92■□□□□ 0.14
CMTM1-218ENST00000533915 FSCN1Q16658 493 aaKnown RBP15.92■□□□□ 0.14
CMTM1-218ENST00000533915 GNASQ5JWF2 1037 aa15.92■□□□□ 0.14
CMTM1-218ENST00000533915 LRCH2Q5VUJ6 765 aa15.92■□□□□ 0.14
CMTM1-218ENST00000533915 ANO1Q5XXA6 986 aa15.92■□□□□ 0.14
CMTM1-218ENST00000533915 CYFIP1Q7L576 1253 aa15.92■□□□□ 0.14
CMTM1-218ENST00000533915 ANKLE1Q8NAG6 615 aa15.92■□□□□ 0.14
CMTM1-218ENST00000533915 PPTC7Q8NI37 304 aa15.92■□□□□ 0.14
CMTM1-218ENST00000533915 U2AF1L4Q8WU68 220 aaKnown RBP15.92■□□□□ 0.14
CMTM1-218ENST00000533915 SLC5A5Q92911 643 aa15.92■□□□□ 0.14
CMTM1-218ENST00000533915 LENG9Q96B70 501 aa15.92■□□□□ 0.14
CMTM1-218ENST00000533915 PKD2L1Q9P0L9 805 aa15.92■□□□□ 0.14
CMTM1-218ENST00000533915 SLC9A2Q9UBY0 812 aa15.92■□□□□ 0.14
CMTM1-218ENST00000533915 OGDHLQ9ULD0 1010 aa15.92■□□□□ 0.14
CMTM1-218ENST00000533915 SYNRGQ9UMZ2 1314 aa15.92■□□□□ 0.14
CMTM1-218ENST00000533915 SLC37A4O43826 429 aa15.91■□□□□ 0.14
CMTM1-218ENST00000533915 FARP2O94887 1054 aaPredicted RBP15.91■□□□□ 0.14
CMTM1-218ENST00000533915 OR52Z1P0C646 297 aa15.91■□□□□ 0.14
CMTM1-218ENST00000533915 TOB1P50616 345 aaPredicted RBP15.91■□□□□ 0.14
CMTM1-218ENST00000533915 NKX3-2P78367 333 aa15.91■□□□□ 0.14
CMTM1-218ENST00000533915 SP2Q02086 613 aa15.91■□□□□ 0.14
CMTM1-218ENST00000533915 ARHGAP1Q07960 439 aa15.91■□□□□ 0.14
CMTM1-218ENST00000533915 DGKDQ16760 1214 aa15.91■□□□□ 0.14
CMTM1-218ENST00000533915 TMEM266Q2M3C6 531 aa15.91■□□□□ 0.14
CMTM1-218ENST00000533915 FOXD4L5Q5VV16 416 aaPredicted RBP15.91■□□□□ 0.14
CMTM1-218ENST00000533915 POTEDQ86YR6 584 aa15.91■□□□□ 0.14
CMTM1-218ENST00000533915 ETNPPLQ8TBG4 499 aa15.91■□□□□ 0.14
CMTM1-218ENST00000533915 FOXD4L4Q8WXT5 416 aaPredicted RBP15.91■□□□□ 0.14
CMTM1-218ENST00000533915 TSEN34Q9BSV6 310 aaKnown RBP15.91■□□□□ 0.14
CMTM1-218ENST00000533915 RAB34Q9BZG1 259 aa15.91■□□□□ 0.14
CMTM1-218ENST00000533915 CRISPLD2Q9H0B8 497 aa15.91■□□□□ 0.14
CMTM1-218ENST00000533915 KCNMB3Q9NPA1 279 aa15.91■□□□□ 0.14
CMTM1-218ENST00000533915 POLR3EQ9NVU0 708 aa15.91■□□□□ 0.14
CMTM1-218ENST00000533915 CFAP45Q9UL16 551 aa15.91■□□□□ 0.14
CMTM1-218ENST00000533915 A6NJR5 290 aa15.9■□□□□ 0.14
CMTM1-218ENST00000533915 DNM1LO00429 736 aa15.9■□□□□ 0.14
CMTM1-218ENST00000533915 EDIL3O43854 480 aa15.9■□□□□ 0.14
CMTM1-218ENST00000533915 ATP9AO75110 1047 aa15.9■□□□□ 0.14
CMTM1-218ENST00000533915 PPFIA4O75335 1185 aa15.9■□□□□ 0.14
CMTM1-218ENST00000533915 PGK1P00558 417 aa15.9■□□□□ 0.14
CMTM1-218ENST00000533915 CST5P28325 142 aaPredicted RBP15.9■□□□□ 0.14
CMTM1-218ENST00000533915 SFNP31947 248 aa15.9■□□□□ 0.14
CMTM1-218ENST00000533915 GJC2Q5T442 439 aaPredicted RBP15.9■□□□□ 0.14
CMTM1-218ENST00000533915 ZNF746Q6NUN9 644 aaPredicted RBP15.9■□□□□ 0.14
CMTM1-218ENST00000533915 SMAP1Q8IYB5 467 aaPredicted RBP15.9■□□□□ 0.14
CMTM1-218ENST00000533915 AFG1LQ8WV93 481 aa15.9■□□□□ 0.14
CMTM1-218ENST00000533915 SEPT1Q8WYJ6 367 aa15.9■□□□□ 0.14
CMTM1-218ENST00000533915 COPS5Q92905 334 aa15.9■□□□□ 0.14
CMTM1-218ENST00000533915 LENG1Q96BZ8 264 aaPredicted RBP15.9■□□□□ 0.14
CMTM1-218ENST00000533915 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.9■□□□□ 0.14
CMTM1-218ENST00000533915 PCDHA12Q9UN75 941 aa15.9■□□□□ 0.14
CMTM1-218ENST00000533915 PCDHB6Q9Y5E3 794 aa15.9■□□□□ 0.14
CMTM1-218ENST00000533915 MOXD2PA6NHM9 499 aa15.89■□□□□ 0.13
CMTM1-218ENST00000533915 WDR64B1ANS9 1081 aa15.89■□□□□ 0.13
CMTM1-218ENST00000533915 ADCY6O43306 1168 aa15.89■□□□□ 0.13
CMTM1-218ENST00000533915 ADAMTS4O75173 837 aa15.89■□□□□ 0.13
CMTM1-218ENST00000533915 CABYRO75952 493 aa15.89■□□□□ 0.13
CMTM1-218ENST00000533915 PRPHP41219 470 aa15.89■□□□□ 0.13
CMTM1-218ENST00000533915 JAK3P52333 1124 aa15.89■□□□□ 0.13
CMTM1-218ENST00000533915 SP4Q02446 784 aa15.89■□□□□ 0.13
CMTM1-218ENST00000533915 PTGDRQ13258 359 aa15.89■□□□□ 0.13
CMTM1-218ENST00000533915 ITGB3BPQ13352 177 aaPredicted RBP15.89■□□□□ 0.13
CMTM1-218ENST00000533915 PKP1Q13835 747 aa15.89■□□□□ 0.13
CMTM1-218ENST00000533915 LRRC41Q15345 812 aa15.89■□□□□ 0.13
CMTM1-218ENST00000533915 MIS18BP1Q6P0N0 1132 aa15.89■□□□□ 0.13
CMTM1-218ENST00000533915 RDM1Q8NG50 284 aa15.89■□□□□ 0.13
CMTM1-218ENST00000533915 AZI2Q9H6S1 392 aa15.89■□□□□ 0.13
CMTM1-218ENST00000533915 CHMP5Q9NZZ3 219 aa15.89■□□□□ 0.13
CMTM1-218ENST00000533915 SAMM50Q9Y512 469 aa15.89■□□□□ 0.13
CMTM1-218ENST00000533915 STK24Q9Y6E0 443 aa15.89■□□□□ 0.13
CMTM1-218ENST00000533915 ELP1O95163 1332 aa15.89■□□□□ 0.13
CMTM1-218ENST00000533915 CCDC85CA6NKD9 419 aa15.88■□□□□ 0.13
CMTM1-218ENST00000533915 DDX39AO00148 427 aaKnown RBP15.88■□□□□ 0.13
CMTM1-218ENST00000533915 DHX15O43143 795 aaKnown RBP15.88■□□□□ 0.13
CMTM1-218ENST00000533915 SORBS3O60504 671 aa15.88■□□□□ 0.13
CMTM1-218ENST00000533915 PSMD10O75832 226 aa15.88■□□□□ 0.13
CMTM1-218ENST00000533915 PSAPP07602 524 aa15.88■□□□□ 0.13
CMTM1-218ENST00000533915 MMP3P08254 477 aa15.88■□□□□ 0.13
CMTM1-218ENST00000533915 DDIT3P35638 169 aa15.88■□□□□ 0.13
CMTM1-218ENST00000533915 TXKP42681 527 aa15.88■□□□□ 0.13
CMTM1-218ENST00000533915 ACTR2P61160 394 aa15.88■□□□□ 0.13
CMTM1-218ENST00000533915 ARL6IP4Q66PJ3 421 aaKnown RBP15.88■□□□□ 0.13
CMTM1-218ENST00000533915 DTHD1Q6ZMT9 781 aa15.88■□□□□ 0.13
CMTM1-218ENST00000533915 KLHDC9Q8NEP7 349 aa15.88■□□□□ 0.13
CMTM1-218ENST00000533915 TNPO1Q92973 898 aaKnown RBP15.88■□□□□ 0.13
CMTM1-218ENST00000533915 MTMR9Q96QG7 549 aa15.88■□□□□ 0.13
CMTM1-218ENST00000533915 GPR20Q99678 358 aa15.88■□□□□ 0.13
CMTM1-218ENST00000533915 TTC12Q9H892 705 aaPredicted RBP15.88■□□□□ 0.13
CMTM1-218ENST00000533915 ZNF215Q9UL58 517 aaPredicted RBP15.88■□□□□ 0.13
CMTM1-218ENST00000533915 PCDHA10Q9Y5I2 948 aa15.88■□□□□ 0.13
CMTM1-218ENST00000533915 FRMPD3Q5JV73 1810 aa15.87■□□□□ 0.13
CMTM1-218ENST00000533915 MYL3P08590 195 aa15.87■□□□□ 0.13
CMTM1-218ENST00000533915 ATP2C1P98194 919 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms