RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 SPATA31C2B4DYI2 1134 aa20.89■□□□□ 0.93
UBXN1-216ENST00000533908 EFCAB14O75071 495 aa20.89■□□□□ 0.93
UBXN1-216ENST00000533908 LGALS2P05162 132 aa20.89■□□□□ 0.93
UBXN1-216ENST00000533908 RSPH10BP0C881 870 aa20.89■□□□□ 0.93
UBXN1-216ENST00000533908 SMIM10L2AP0DMW4 78 aa20.89■□□□□ 0.93
UBXN1-216ENST00000533908 SMIM10L2BP0DMW5 78 aa20.89■□□□□ 0.93
UBXN1-216ENST00000533908 IGDCC4Q8TDY8 1250 aa20.89■□□□□ 0.93
UBXN1-216ENST00000533908 ATP6V0A1Q93050 837 aa20.89■□□□□ 0.93
UBXN1-216ENST00000533908 TGS1Q96RS0 853 aaKnown RBP20.89■□□□□ 0.93
UBXN1-216ENST00000533908 U3KPZ7 1027 aaPredicted RBP20.89■□□□□ 0.93
UBXN1-216ENST00000533908 FRMPD4Q14CM0 1322 aa20.88■□□□□ 0.93
UBXN1-216ENST00000533908 C17orf102A2RUQ5 167 aa20.88■□□□□ 0.93
UBXN1-216ENST00000533908 ICAM3P32942 547 aa20.88■□□□□ 0.93
UBXN1-216ENST00000533908 WTAPQ15007 396 aa20.88■□□□□ 0.93
UBXN1-216ENST00000533908 PLEKHG4Q58EX7 1191 aa20.88■□□□□ 0.93
UBXN1-216ENST00000533908 KHSRPQ92945 711 aaKnown RBP eCLIP20.88■□□□□ 0.93
UBXN1-216ENST00000533908 INPP4AQ96PE3 977 aaPredicted RBP20.88■□□□□ 0.93
UBXN1-216ENST00000533908 C17orf80Q9BSJ5 609 aa20.88■□□□□ 0.93
UBXN1-216ENST00000533908 HTRA4P83105 476 aaPredicted RBP20.87■□□□□ 0.93
UBXN1-216ENST00000533908 COL9A3Q14050 684 aaPredicted RBP20.87■□□□□ 0.93
UBXN1-216ENST00000533908 CYFIP1Q7L576 1253 aa20.87■□□□□ 0.93
UBXN1-216ENST00000533908 NCOA7Q8NI08 942 aa20.87■□□□□ 0.93
UBXN1-216ENST00000533908 GPR20Q99678 358 aa20.87■□□□□ 0.93
UBXN1-216ENST00000533908 SETD4Q9NVD3 440 aa20.87■□□□□ 0.93
UBXN1-216ENST00000533908 EMSYQ7Z589 1322 aa20.86■□□□□ 0.93
UBXN1-216ENST00000533908 BRWD1Q9NSI6 2320 aa20.86■□□□□ 0.93
UBXN1-216ENST00000533908 TRAF1Q13077 416 aa20.86■□□□□ 0.93
UBXN1-216ENST00000533908 USP17L6PQ6QN14 398 aa20.86■□□□□ 0.93
UBXN1-216ENST00000533908 TRIM50Q86XT4 487 aa20.86■□□□□ 0.93
UBXN1-216ENST00000533908 MB21D2Q8IYB1 491 aaPredicted RBP20.86■□□□□ 0.93
UBXN1-216ENST00000533908 MYOCDQ8IZQ8 938 aa20.86■□□□□ 0.93
UBXN1-216ENST00000533908 MYL10Q9BUA6 226 aa20.86■□□□□ 0.93
UBXN1-216ENST00000533908 CD320Q9NPF0 282 aa20.86■□□□□ 0.93
UBXN1-216ENST00000533908 INSL6Q9Y581 213 aa20.86■□□□□ 0.93
UBXN1-216ENST00000533908 DOCK5Q9H7D0 1870 aa20.86■□□□□ 0.93
UBXN1-216ENST00000533908 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.85■□□□□ 0.93
UBXN1-216ENST00000533908 ERICH2A1L162 156 aa20.85■□□□□ 0.93
UBXN1-216ENST00000533908 SGSM2O43147 1006 aa20.85■□□□□ 0.93
UBXN1-216ENST00000533908 ADAM17P78536 824 aa20.85■□□□□ 0.93
UBXN1-216ENST00000533908 METTL7BQ6UX53 244 aa20.85■□□□□ 0.93
UBXN1-216ENST00000533908 RALYLQ86SE5 291 aaKnown RBP20.85■□□□□ 0.93
UBXN1-216ENST00000533908 SP7Q8TDD2 431 aaPredicted RBP20.85■□□□□ 0.93
UBXN1-216ENST00000533908 RUFY2Q8WXA3 655 aa20.85■□□□□ 0.93
UBXN1-216ENST00000533908 MAP4K1Q92918 833 aa20.85■□□□□ 0.93
UBXN1-216ENST00000533908 USP26Q9BXU7 913 aa20.85■□□□□ 0.93
UBXN1-216ENST00000533908 SUPT16HQ9Y5B9 1047 aaKnown RBP20.85■□□□□ 0.93
UBXN1-216ENST00000533908 MICAL3Q7RTP6 2002 aa20.84■□□□□ 0.93
UBXN1-216ENST00000533908 SIP14410 1827 aa20.84■□□□□ 0.93
UBXN1-216ENST00000533908 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.84■□□□□ 0.93
UBXN1-216ENST00000533908 MEIS2O14770 477 aa20.84■□□□□ 0.93
UBXN1-216ENST00000533908 AMHP03971 560 aa20.84■□□□□ 0.93
UBXN1-216ENST00000533908 CTSHP09668 335 aa20.84■□□□□ 0.93
UBXN1-216ENST00000533908 NEDD9Q14511 834 aa20.84■□□□□ 0.93
UBXN1-216ENST00000533908 GNPTABQ3T906 1256 aa20.84■□□□□ 0.93
UBXN1-216ENST00000533908 CATIPQ7Z7H3 387 aa20.84■□□□□ 0.93
UBXN1-216ENST00000533908 NOP56O00567 594 aaKnown RBP20.83■□□□□ 0.93
UBXN1-216ENST00000533908 FIBPO43427 364 aa20.83■□□□□ 0.93
UBXN1-216ENST00000533908 STAM2O75886 525 aa20.83■□□□□ 0.93
UBXN1-216ENST00000533908 UTP14CQ5TAP6 766 aaKnown RBP20.83■□□□□ 0.93
UBXN1-216ENST00000533908 FBXO22Q8NEZ5 403 aa20.83■□□□□ 0.93
UBXN1-216ENST00000533908 TOP1MTQ969P6 601 aa20.83■□□□□ 0.93
UBXN1-216ENST00000533908 C1QTNF1Q9BXJ1 281 aa20.83■□□□□ 0.93
UBXN1-216ENST00000533908 LY9Q9HBG7 655 aa20.83■□□□□ 0.93
UBXN1-216ENST00000533908 ATP9AO75110 1047 aa20.82■□□□□ 0.92
UBXN1-216ENST00000533908 UPP2O95045 317 aa20.82■□□□□ 0.92
UBXN1-216ENST00000533908 SP4Q02446 784 aa20.82■□□□□ 0.92
UBXN1-216ENST00000533908 SART3Q15020 963 aaKnown RBP20.82■□□□□ 0.92
UBXN1-216ENST00000533908 PCNX4Q63HM2 1172 aa20.82■□□□□ 0.92
UBXN1-216ENST00000533908 ZNF654Q8IZM8 581 aa20.82■□□□□ 0.92
UBXN1-216ENST00000533908 SEPT8Q92599 483 aa20.82■□□□□ 0.92
UBXN1-216ENST00000533908 LRFN3Q9BTN0 628 aa20.82■□□□□ 0.92
UBXN1-216ENST00000533908 SPZ1Q9BXG8 430 aa20.82■□□□□ 0.92
UBXN1-216ENST00000533908 UBE2ZQ9H832 354 aaPredicted RBP20.82■□□□□ 0.92
UBXN1-216ENST00000533908 PLEKHA8P1O95397 391 aa20.81■□□□□ 0.92
UBXN1-216ENST00000533908 EPC2Q52LR7 807 aa20.81■□□□□ 0.92
UBXN1-216ENST00000533908 FAM26DQ5JW98 314 aa20.81■□□□□ 0.92
UBXN1-216ENST00000533908 CMTR1Q8N1G2 835 aaKnown RBP20.81■□□□□ 0.92
UBXN1-216ENST00000533908 SRBD1Q8N5C6 995 aaKnown RBP20.81■□□□□ 0.92
UBXN1-216ENST00000533908 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.81■□□□□ 0.92
UBXN1-216ENST00000533908 SMARCC2Q8TAQ2 1214 aa20.81■□□□□ 0.92
UBXN1-216ENST00000533908 LMBR1Q8WVP7 490 aa20.81■□□□□ 0.92
UBXN1-216ENST00000533908 MAP3K14Q99558 947 aa20.81■□□□□ 0.92
UBXN1-216ENST00000533908 RBM8AQ9Y5S9 174 aaKnown RBP20.81■□□□□ 0.92
UBXN1-216ENST00000533908 PIK3CDO00329 1044 aa20.8■□□□□ 0.92
UBXN1-216ENST00000533908 CAND2O75155 1236 aa20.8■□□□□ 0.92
UBXN1-216ENST00000533908 CHRNA1P02708 482 aa20.8■□□□□ 0.92
UBXN1-216ENST00000533908 RRP36Q96EU6 259 aaKnown RBP20.8■□□□□ 0.92
UBXN1-216ENST00000533908 SENP7Q9BQF6 1050 aa20.8■□□□□ 0.92
UBXN1-216ENST00000533908 C11orf16Q9NQ32 467 aa20.8■□□□□ 0.92
UBXN1-216ENST00000533908 KCNA5P22460 613 aa20.79■□□□□ 0.92
UBXN1-216ENST00000533908 SMARCA1P28370 1054 aa20.79■□□□□ 0.92
UBXN1-216ENST00000533908 ARHGAP4P98171 946 aa20.79■□□□□ 0.92
UBXN1-216ENST00000533908 LEXMQ3ZCV2 418 aa20.79■□□□□ 0.92
UBXN1-216ENST00000533908 RUFY4Q6ZNE9 571 aa20.79■□□□□ 0.92
UBXN1-216ENST00000533908 MRPL38Q96DV4 380 aaKnown RBP20.79■□□□□ 0.92
UBXN1-216ENST00000533908 GSTTP1A0A1W2PQM5 241 aa20.78■□□□□ 0.92
UBXN1-216ENST00000533908 PRC1O43663 620 aa20.78■□□□□ 0.92
UBXN1-216ENST00000533908 DDAH1O94760 285 aa20.78■□□□□ 0.92
UBXN1-216ENST00000533908 GNAT1P11488 350 aa20.78■□□□□ 0.92
UBXN1-216ENST00000533908 KCNA2P16389 499 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms