RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 LY6KQ17RY6 165 aa12.56□□□□□ -0.4
CSDE1-215ENST00000533818 CCDC62Q6P9F0 684 aa12.56□□□□□ -0.4
CSDE1-215ENST00000533818 CTR9Q6PD62 1173 aa12.56□□□□□ -0.4
CSDE1-215ENST00000533818 SIX5Q8N196 739 aa12.56□□□□□ -0.4
CSDE1-215ENST00000533818 CHMP4CQ96CF2 233 aa12.56□□□□□ -0.4
CSDE1-215ENST00000533818 POMKQ9H5K3 350 aa12.56□□□□□ -0.4
CSDE1-215ENST00000533818 SMC4Q9NTJ3 1288 aa12.56□□□□□ -0.4
CSDE1-215ENST00000533818 CDH22Q9UJ99 828 aa12.56□□□□□ -0.4
CSDE1-215ENST00000533818 SYNPO2Q9UMS6 1093 aa12.56□□□□□ -0.4
CSDE1-215ENST00000533818 IGKV6D-41A0A0C4DH26 115 aa12.55□□□□□ -0.4
CSDE1-215ENST00000533818 B4DLN1 442 aa12.55□□□□□ -0.4
CSDE1-215ENST00000533818 NFIBO00712 420 aa12.55□□□□□ -0.4
CSDE1-215ENST00000533818 KINO60870 393 aaKnown RBP12.55□□□□□ -0.4
CSDE1-215ENST00000533818 DGKIO75912 1065 aa12.55□□□□□ -0.4
CSDE1-215ENST00000533818 MBD4O95243 580 aa12.55□□□□□ -0.4
CSDE1-215ENST00000533818 F2P00734 622 aa12.55□□□□□ -0.4
CSDE1-215ENST00000533818 ZNF286BP0CG31 522 aa12.55□□□□□ -0.4
CSDE1-215ENST00000533818 EDNRBP24530 442 aa12.55□□□□□ -0.4
CSDE1-215ENST00000533818 MRPL12P52815 198 aaKnown RBP12.55□□□□□ -0.4
CSDE1-215ENST00000533818 ZDHHC14Q8IZN3 488 aa12.55□□□□□ -0.4
CSDE1-215ENST00000533818 STK11IPQ8N1F8 1099 aa12.55□□□□□ -0.4
CSDE1-215ENST00000533818 NECTIN4Q96NY8 510 aa12.55□□□□□ -0.4
CSDE1-215ENST00000533818 RNF216Q9NWF9 866 aaPredicted RBP12.55□□□□□ -0.4
CSDE1-215ENST00000533818 ANGPTL2Q9UKU9 493 aa12.55□□□□□ -0.4
CSDE1-215ENST00000533818 ENPP3O14638 875 aa12.54□□□□□ -0.4
CSDE1-215ENST00000533818 TTLL1O95922 423 aa12.54□□□□□ -0.4
CSDE1-215ENST00000533818 ICAM1P05362 532 aa12.54□□□□□ -0.4
CSDE1-215ENST00000533818 SLC1A4P43007 532 aa12.54□□□□□ -0.4
CSDE1-215ENST00000533818 ALDH1L2Q3SY69 923 aa12.54□□□□□ -0.4
CSDE1-215ENST00000533818 CES5AQ6NT32 575 aa12.54□□□□□ -0.4
CSDE1-215ENST00000533818 LLGL2Q6P1M3 1020 aa12.54□□□□□ -0.4
CSDE1-215ENST00000533818 SLC30A10Q6XR72 485 aa12.54□□□□□ -0.4
CSDE1-215ENST00000533818 PLCD3Q8N3E9 789 aa12.54□□□□□ -0.4
CSDE1-215ENST00000533818 TDRD5Q8NAT2 981 aaKnown RBP12.54□□□□□ -0.4
CSDE1-215ENST00000533818 ATP6V0A1Q93050 837 aa12.54□□□□□ -0.4
CSDE1-215ENST00000533818 EAF2Q96CJ1 260 aaPredicted RBP12.54□□□□□ -0.4
CSDE1-215ENST00000533818 CEP95Q96GE4 821 aa12.54□□□□□ -0.4
CSDE1-215ENST00000533818 API5Q9BZZ5 524 aaKnown RBP12.54□□□□□ -0.4
CSDE1-215ENST00000533818 MTMR4Q9NYA4 1195 aa12.54□□□□□ -0.4
CSDE1-215ENST00000533818 PRR12Q9ULL5 1215 aa12.54□□□□□ -0.4
CSDE1-215ENST00000533818 NOB1Q9ULX3 412 aaKnown RBP12.54□□□□□ -0.4
CSDE1-215ENST00000533818 ZZEF1O43149 2961 aa12.53□□□□□ -0.4
CSDE1-215ENST00000533818 PLA2G6O60733 806 aa12.53□□□□□ -0.4
CSDE1-215ENST00000533818 CAND2O75155 1236 aa12.53□□□□□ -0.4
CSDE1-215ENST00000533818 GNAI2P04899 355 aa12.53□□□□□ -0.4
CSDE1-215ENST00000533818 RFX1P22670 979 aa12.53□□□□□ -0.4
CSDE1-215ENST00000533818 MCCP23508 829 aa12.53□□□□□ -0.4
CSDE1-215ENST00000533818 KCNC3Q14003 757 aa12.53□□□□□ -0.4
CSDE1-215ENST00000533818 TPRNQ4KMQ1 711 aa12.53□□□□□ -0.4
CSDE1-215ENST00000533818 SEPT14Q6ZU15 432 aa12.53□□□□□ -0.4
CSDE1-215ENST00000533818 CMTR2Q8IYT2 770 aaKnown RBP12.53□□□□□ -0.4
CSDE1-215ENST00000533818 DNERQ8NFT8 737 aa12.53□□□□□ -0.4
CSDE1-215ENST00000533818 SECISBP2LQ93073 1101 aaKnown RBP12.53□□□□□ -0.4
CSDE1-215ENST00000533818 GMCL1Q96IK5 515 aa12.53□□□□□ -0.4
CSDE1-215ENST00000533818 USP18Q9UMW8 372 aa12.53□□□□□ -0.4
CSDE1-215ENST00000533818 GCN1Q92616 2671 aaKnown RBP12.52□□□□□ -0.41
CSDE1-215ENST00000533818 C17orf102A2RUQ5 167 aa12.52□□□□□ -0.41
CSDE1-215ENST00000533818 SURF6O75683 361 aaKnown RBP12.52□□□□□ -0.41
CSDE1-215ENST00000533818 UBE3AQ05086 875 aa12.52□□□□□ -0.41
CSDE1-215ENST00000533818 TBC1D8BQ0IIM8 1120 aa12.52□□□□□ -0.41
CSDE1-215ENST00000533818 PAN2Q504Q3 1202 aaKnown RBP12.52□□□□□ -0.41
CSDE1-215ENST00000533818 RNF207Q6ZRF8 634 aa12.52□□□□□ -0.41
CSDE1-215ENST00000533818 KCTD1Q719H9 257 aa12.52□□□□□ -0.41
CSDE1-215ENST00000533818 C1orf210Q8IVY1 113 aa12.52□□□□□ -0.41
CSDE1-215ENST00000533818 ADAM7Q9H2U9 754 aa12.52□□□□□ -0.41
CSDE1-215ENST00000533818 SLC4A4Q9Y6R1 1079 aa12.52□□□□□ -0.41
CSDE1-215ENST00000533818 FRYQ5TBA9 3013 aa12.51□□□□□ -0.41
CSDE1-215ENST00000533818 LCTP09848 1927 aa12.51□□□□□ -0.41
CSDE1-215ENST00000533818 TREHO43280 583 aa12.51□□□□□ -0.41
CSDE1-215ENST00000533818 PROS1P07225 676 aa12.51□□□□□ -0.41
CSDE1-215ENST00000533818 ERVFC1P60507 584 aa12.51□□□□□ -0.41
CSDE1-215ENST00000533818 ITIH3Q06033 890 aa12.51□□□□□ -0.41
CSDE1-215ENST00000533818 TDGQ13569 410 aa12.51□□□□□ -0.41
CSDE1-215ENST00000533818 SLFNL1Q499Z3 407 aa12.51□□□□□ -0.41
CSDE1-215ENST00000533818 SPECC1Q5M775 1068 aa12.51□□□□□ -0.41
CSDE1-215ENST00000533818 PDE12Q6L8Q7 609 aaKnown RBP12.51□□□□□ -0.41
CSDE1-215ENST00000533818 ZNF444Q8N0Y2 327 aaPredicted RBP12.51□□□□□ -0.41
CSDE1-215ENST00000533818 RASGRP4Q8TDF6 673 aa12.51□□□□□ -0.41
CSDE1-215ENST00000533818 ASPMQ8IZT6 3477 aa12.51□□□□□ -0.41
CSDE1-215ENST00000533818 GOLIM4O00461 696 aa12.5□□□□□ -0.41
CSDE1-215ENST00000533818 MTHFRP42898 656 aa12.5□□□□□ -0.41
CSDE1-215ENST00000533818 RPS6P62753 249 aaKnown RBP12.5□□□□□ -0.41
CSDE1-215ENST00000533818 LAMC2Q13753 1193 aa12.5□□□□□ -0.41
CSDE1-215ENST00000533818 RCSD1Q6JBY9 416 aa12.5□□□□□ -0.41
CSDE1-215ENST00000533818 PPTC7Q8NI37 304 aa12.5□□□□□ -0.41
CSDE1-215ENST00000533818 CLEC4DQ8WXI8 215 aa12.5□□□□□ -0.41
CSDE1-215ENST00000533818 EMID1Q96A84 441 aaPredicted RBP12.5□□□□□ -0.41
CSDE1-215ENST00000533818 BORCS6Q96GS4 357 aa12.5□□□□□ -0.41
CSDE1-215ENST00000533818 ARPP21Q9UBL0 812 aaPredicted RBP12.5□□□□□ -0.41
CSDE1-215ENST00000533818 PCDHB12Q9Y5F1 795 aa12.5□□□□□ -0.41
CSDE1-215ENST00000533818 ZBED9Q6R2W3 1325 aa12.5□□□□□ -0.41
CSDE1-215ENST00000533818 CEP295Q9C0D2 2601 aa12.5□□□□□ -0.41
CSDE1-215ENST00000533818 SPEGQ15772 3267 aa12.49□□□□□ -0.41
CSDE1-215ENST00000533818 BAZ2AQ9UIF9 1905 aaKnown RBP12.49□□□□□ -0.41
CSDE1-215ENST00000533818 PPFIA4O75335 1185 aa12.49□□□□□ -0.41
CSDE1-215ENST00000533818 ZIC2O95409 532 aaPredicted RBP12.49□□□□□ -0.41
CSDE1-215ENST00000533818 DCNP07585 359 aaKnown RBP12.49□□□□□ -0.41
CSDE1-215ENST00000533818 WEE2P0C1S8 567 aa12.49□□□□□ -0.41
CSDE1-215ENST00000533818 GHRP10912 638 aa12.49□□□□□ -0.41
CSDE1-215ENST00000533818 KCNA4P22459 653 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms