RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 TRIM50Q86XT4 487 aa11.97□□□□□ -0.49
CAPN1-225ENST00000533704 CAGE1Q8TC20 777 aa11.97□□□□□ -0.49
CAPN1-225ENST00000533704 DHX38Q92620 1227 aaKnown RBP11.97□□□□□ -0.49
CAPN1-225ENST00000533704 KCNB2Q92953 911 aa11.97□□□□□ -0.49
CAPN1-225ENST00000533704 CTAGE1Q96RT6 745 aa11.97□□□□□ -0.49
CAPN1-225ENST00000533704 NKX2-4Q9H2Z4 354 aa11.97□□□□□ -0.49
CAPN1-225ENST00000533704 ZNF576Q9H609 170 aa11.97□□□□□ -0.49
CAPN1-225ENST00000533704 TELO2Q9Y4R8 837 aa11.97□□□□□ -0.49
CAPN1-225ENST00000533704 TMEM265A0A087WTH1 108 aa11.96□□□□□ -0.49
CAPN1-225ENST00000533704 H3BRB1 525 aa11.96□□□□□ -0.49
CAPN1-225ENST00000533704 RBAK-RBAKDNI3L0D1 243 aa11.96□□□□□ -0.49
CAPN1-225ENST00000533704 STXBP3O00186 592 aa11.96□□□□□ -0.49
CAPN1-225ENST00000533704 PPFIA3O75145 1194 aa11.96□□□□□ -0.49
CAPN1-225ENST00000533704 SELPP16109 830 aa11.96□□□□□ -0.49
CAPN1-225ENST00000533704 PSMA5P28066 241 aa11.96□□□□□ -0.49
CAPN1-225ENST00000533704 FUT2Q10981 343 aa11.96□□□□□ -0.49
CAPN1-225ENST00000533704 GRIN2CQ14957 1233 aa11.96□□□□□ -0.49
CAPN1-225ENST00000533704 TYW1BQ6NUM6 668 aa11.96□□□□□ -0.49
CAPN1-225ENST00000533704 LRRC8DQ7L1W4 858 aa11.96□□□□□ -0.49
CAPN1-225ENST00000533704 AFAP1L1Q8TED9 768 aa11.96□□□□□ -0.49
CAPN1-225ENST00000533704 ATP6V0A1Q93050 837 aa11.96□□□□□ -0.49
CAPN1-225ENST00000533704 GPRASP2Q96D09 838 aa11.96□□□□□ -0.49
CAPN1-225ENST00000533704 VWCEQ96DN2 955 aa11.96□□□□□ -0.49
CAPN1-225ENST00000533704 GPR20Q99678 358 aa11.96□□□□□ -0.49
CAPN1-225ENST00000533704 C16orf70Q9BSU1 422 aa11.96□□□□□ -0.49
CAPN1-225ENST00000533704 TUT1Q9H6E5 874 aaKnown RBP11.96□□□□□ -0.49
CAPN1-225ENST00000533704 FAM217BQ9NTX9 383 aaPredicted RBP11.96□□□□□ -0.49
CAPN1-225ENST00000533704 TMEM260Q9NX78 707 aa11.96□□□□□ -0.49
CAPN1-225ENST00000533704 PPP4R2Q9NY27 417 aa11.96□□□□□ -0.49
CAPN1-225ENST00000533704 MICAL3Q7RTP6 2002 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 CCDC196A0A1B0GTZ2 297 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 C17orf102A2RUQ5 167 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 SMCO2A6NFE2 343 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 ATP9AO75110 1047 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 SMIM10L2AP0DMW4 78 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 SMIM10L2BP0DMW5 78 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 CKBP12277 381 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 MYOGP15173 224 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 ATP2A2P16615 1042 aaKnown RBP11.95□□□□□ -0.5
CAPN1-225ENST00000533704 ITGB5P18084 799 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 THPOP40225 353 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 RCAN1P53805 252 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 AKAP17AQ02040 695 aaKnown RBP11.95□□□□□ -0.5
CAPN1-225ENST00000533704 PTK7Q13308 1070 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 MTMR1Q13613 665 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 HIC1Q14526 733 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 PPP1R18Q6NYC8 613 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 GIMAP8Q8ND71 665 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-225ENST00000533704 MAFAQ8NHW3 353 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-225ENST00000533704 WNT8BQ93098 351 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 CDHR1Q96JP9 859 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 USP26Q9BXU7 913 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 SLC28A3Q9HAS3 691 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 RIC8AQ9NPQ8 531 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 BARHL2Q9NY43 387 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 ZNF215Q9UL58 517 aaPredicted RBP11.95□□□□□ -0.5
CAPN1-225ENST00000533704 YBX2Q9Y2T7 364 aaKnown RBP11.95□□□□□ -0.5
CAPN1-225ENST00000533704 UBIAD1Q9Y5Z9 338 aa11.95□□□□□ -0.5
CAPN1-225ENST00000533704 MYH9P35579 1960 aaKnown RBP11.95□□□□□ -0.5
CAPN1-225ENST00000533704 LOXHD1Q8IVV2 1947 aa11.94□□□□□ -0.5
CAPN1-225ENST00000533704 hCG_1984214I3L0E3 225 aa11.94□□□□□ -0.5
CAPN1-225ENST00000533704 SCG2P13521 617 aa11.94□□□□□ -0.5
CAPN1-225ENST00000533704 KCNA2P16389 499 aa11.94□□□□□ -0.5
CAPN1-225ENST00000533704 TCF7P36402 384 aaPredicted RBP11.94□□□□□ -0.5
CAPN1-225ENST00000533704 ZNF76P36508 570 aa11.94□□□□□ -0.5
CAPN1-225ENST00000533704 KCNJ6P48051 423 aa11.94□□□□□ -0.5
CAPN1-225ENST00000533704 CCT2P78371 535 aaKnown RBP11.94□□□□□ -0.5
CAPN1-225ENST00000533704 ZNF618Q5T7W0 954 aa11.94□□□□□ -0.5
CAPN1-225ENST00000533704 JAKMIP3Q5VZ66 844 aa11.94□□□□□ -0.5
CAPN1-225ENST00000533704 ZNF713Q8N859 430 aaPredicted RBP11.94□□□□□ -0.5
CAPN1-225ENST00000533704 PHKBQ93100 1093 aa11.94□□□□□ -0.5
CAPN1-225ENST00000533704 SENP7Q9BQF6 1050 aa11.94□□□□□ -0.5
CAPN1-225ENST00000533704 ANO3Q9BYT9 981 aa11.94□□□□□ -0.5
CAPN1-225ENST00000533704 PRDM12Q9H4Q4 367 aa11.94□□□□□ -0.5
CAPN1-225ENST00000533704 JADE2Q9NQC1 790 aa11.94□□□□□ -0.5
CAPN1-225ENST00000533704 SETD4Q9NVD3 440 aa11.94□□□□□ -0.5
CAPN1-225ENST00000533704 COL6A3P12111 3177 aa11.93□□□□□ -0.5
CAPN1-225ENST00000533704 TREHO43280 583 aa11.93□□□□□ -0.5
CAPN1-225ENST00000533704 NBNO60934 754 aa11.93□□□□□ -0.5
CAPN1-225ENST00000533704 FOSP01100 380 aaPredicted RBP11.93□□□□□ -0.5
CAPN1-225ENST00000533704 CTSHP09668 335 aa11.93□□□□□ -0.5
CAPN1-225ENST00000533704 MARK3P27448 753 aa11.93□□□□□ -0.5
CAPN1-225ENST00000533704 ARHGAP4P98171 946 aa11.93□□□□□ -0.5
CAPN1-225ENST00000533704 PFKFB3Q16875 520 aaPredicted RBP11.93□□□□□ -0.5
CAPN1-225ENST00000533704 PPP2R2DQ66LE6 453 aa11.93□□□□□ -0.5
CAPN1-225ENST00000533704 RUFY3Q7L099 469 aa11.93□□□□□ -0.5
CAPN1-225ENST00000533704 CYP2W1Q8TAV3 490 aa11.93□□□□□ -0.5
CAPN1-225ENST00000533704 GLG1Q92896 1179 aa11.93□□□□□ -0.5
CAPN1-225ENST00000533704 SLC9A7Q96T83 725 aa11.93□□□□□ -0.5
CAPN1-225ENST00000533704 GAS2L1Q99501 681 aaPredicted RBP11.93□□□□□ -0.5
CAPN1-225ENST00000533704 LARP6Q9BRS8 491 aaKnown RBP11.93□□□□□ -0.5
CAPN1-225ENST00000533704 SLC26A6Q9BXS9 759 aa11.93□□□□□ -0.5
CAPN1-225ENST00000533704 UPF3BQ9BZI7 483 aaKnown RBP11.93□□□□□ -0.5
CAPN1-225ENST00000533704 RNPEPQ9H4A4 650 aa11.93□□□□□ -0.5
CAPN1-225ENST00000533704 NCOA5Q9HCD5 579 aaKnown RBP11.93□□□□□ -0.5
CAPN1-225ENST00000533704 CYP46A1Q9Y6A2 500 aa11.93□□□□□ -0.5
CAPN1-225ENST00000533704 WDR81Q562E7 1941 aa11.93□□□□□ -0.5
CAPN1-225ENST00000533704 ARP10275 920 aa11.92□□□□□ -0.5
CAPN1-225ENST00000533704 GNAT1P11488 350 aa11.92□□□□□ -0.5
CAPN1-225ENST00000533704 IGFBP4P22692 258 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms