RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 ZNF200P98182 395 aaPredicted RBP17.72■□□□□ 0.43
CPSF1-211ENST00000533492 SP4Q02446 784 aa17.72■□□□□ 0.43
CPSF1-211ENST00000533492 GPRASP2Q96D09 838 aa17.72■□□□□ 0.43
CPSF1-211ENST00000533492 SLC9A7Q96T83 725 aa17.72■□□□□ 0.43
CPSF1-211ENST00000533492 GPR20Q99678 358 aa17.72■□□□□ 0.43
CPSF1-211ENST00000533492 PRDM12Q9H4Q4 367 aa17.72■□□□□ 0.43
CPSF1-211ENST00000533492 PCDHA6Q9UN73 950 aa17.72■□□□□ 0.43
CPSF1-211ENST00000533492 PCDHA8Q9Y5H6 950 aa17.72■□□□□ 0.43
CPSF1-211ENST00000533492 V9GY48 417 aaPredicted RBP17.72■□□□□ 0.43
CPSF1-211ENST00000533492 CNTNAP5Q8WYK1 1306 aa17.72■□□□□ 0.43
CPSF1-211ENST00000533492 KIF28PB7ZC32 967 aa17.71■□□□□ 0.43
CPSF1-211ENST00000533492 BAIAP3O94812 1187 aa17.71■□□□□ 0.43
CPSF1-211ENST00000533492 KCNJ6P48051 423 aa17.71■□□□□ 0.43
CPSF1-211ENST00000533492 RBL2Q08999 1139 aa17.71■□□□□ 0.43
CPSF1-211ENST00000533492 UTP14CQ5TAP6 766 aaKnown RBP17.71■□□□□ 0.43
CPSF1-211ENST00000533492 PPP2R2DQ66LE6 453 aa17.71■□□□□ 0.43
CPSF1-211ENST00000533492 PHOSPHO2Q8TCD6 241 aa17.71■□□□□ 0.43
CPSF1-211ENST00000533492 ATP6V0A1Q93050 837 aa17.71■□□□□ 0.43
CPSF1-211ENST00000533492 JAKMIP1Q96N16 626 aaKnown RBP17.71■□□□□ 0.43
CPSF1-211ENST00000533492 ZNF215Q9UL58 517 aaPredicted RBP17.71■□□□□ 0.43
CPSF1-211ENST00000533492 GBF1Q92538 1859 aa17.7■□□□□ 0.42
CPSF1-211ENST00000533492 TANC1Q9C0D5 1861 aa17.7■□□□□ 0.42
CPSF1-211ENST00000533492 CCDC196A0A1B0GTZ2 297 aa17.7■□□□□ 0.42
CPSF1-211ENST00000533492 REC8O95072 547 aa17.7■□□□□ 0.42
CPSF1-211ENST00000533492 SMIM10L2AP0DMW4 78 aa17.7■□□□□ 0.42
CPSF1-211ENST00000533492 SMIM10L2BP0DMW5 78 aa17.7■□□□□ 0.42
CPSF1-211ENST00000533492 GNAT1P11488 350 aa17.7■□□□□ 0.42
CPSF1-211ENST00000533492 CPA1P15085 419 aa17.7■□□□□ 0.42
CPSF1-211ENST00000533492 MYOGP15173 224 aa17.7■□□□□ 0.42
CPSF1-211ENST00000533492 HSPA4P34932 840 aa17.7■□□□□ 0.42
CPSF1-211ENST00000533492 RCAN1P53805 252 aa17.7■□□□□ 0.42
CPSF1-211ENST00000533492 ZNF618Q5T7W0 954 aa17.7■□□□□ 0.42
CPSF1-211ENST00000533492 WWC2Q6AWC2 1192 aa17.7■□□□□ 0.42
CPSF1-211ENST00000533492 BLOC1S2Q6QNY1 142 aa17.7■□□□□ 0.42
CPSF1-211ENST00000533492 Q6ZUG5 572 aa17.7■□□□□ 0.42
CPSF1-211ENST00000533492 TET1Q8NFU7 2136 aa17.7■□□□□ 0.42
CPSF1-211ENST00000533492 RNPEPQ9H4A4 650 aa17.7■□□□□ 0.42
CPSF1-211ENST00000533492 A0A0C4DFX4 3053 aa17.7■□□□□ 0.42
CPSF1-211ENST00000533492 hCG_1984214I3L0E3 225 aa17.69■□□□□ 0.42
CPSF1-211ENST00000533492 MAFGO15525 162 aa17.69■□□□□ 0.42
CPSF1-211ENST00000533492 ATP9AO75110 1047 aa17.69■□□□□ 0.42
CPSF1-211ENST00000533492 ITGB5P18084 799 aa17.69■□□□□ 0.42
CPSF1-211ENST00000533492 THPOP40225 353 aa17.69■□□□□ 0.42
CPSF1-211ENST00000533492 METAP2P50579 478 aaKnown RBP eCLIP17.69■□□□□ 0.428e-7■■□□□ 12.4
CPSF1-211ENST00000533492 MTMR1Q13613 665 aa17.69■□□□□ 0.42
CPSF1-211ENST00000533492 HIC1Q14526 733 aa17.69■□□□□ 0.42
CPSF1-211ENST00000533492 PPP1R18Q6NYC8 613 aa17.69■□□□□ 0.42
CPSF1-211ENST00000533492 CNKSR3Q6P9H4 555 aa17.69■□□□□ 0.42
CPSF1-211ENST00000533492 TEX2Q8IWB9 1127 aa17.69■□□□□ 0.42
CPSF1-211ENST00000533492 ZNF713Q8N859 430 aaPredicted RBP17.69■□□□□ 0.42
CPSF1-211ENST00000533492 KCNB2Q92953 911 aa17.69■□□□□ 0.42
CPSF1-211ENST00000533492 RIC8AQ9NPQ8 531 aa17.69■□□□□ 0.42
CPSF1-211ENST00000533492 SNX14Q9Y5W7 946 aa17.69■□□□□ 0.42
CPSF1-211ENST00000533492 UBIAD1Q9Y5Z9 338 aa17.69■□□□□ 0.42
CPSF1-211ENST00000533492 DOCK5Q9H7D0 1870 aa17.69■□□□□ 0.42
CPSF1-211ENST00000533492 SMCO2A6NFE2 343 aa17.68■□□□□ 0.42
CPSF1-211ENST00000533492 NBNO60934 754 aa17.68■□□□□ 0.42
CPSF1-211ENST00000533492 FOSP01100 380 aaPredicted RBP17.68■□□□□ 0.42
CPSF1-211ENST00000533492 CXCL10P02778 98 aa17.68■□□□□ 0.42
CPSF1-211ENST00000533492 IGFBP4P22692 258 aa17.68■□□□□ 0.42
CPSF1-211ENST00000533492 PSMA5P28066 241 aa17.68■□□□□ 0.42
CPSF1-211ENST00000533492 CDC27P30260 824 aa17.68■□□□□ 0.42
CPSF1-211ENST00000533492 ADD1P35611 737 aaKnown RBP17.68■□□□□ 0.42
CPSF1-211ENST00000533492 ADCY7P51828 1080 aa17.68■□□□□ 0.42
CPSF1-211ENST00000533492 APOBRQ0VD83 1088 aa17.68■□□□□ 0.42
CPSF1-211ENST00000533492 FUT2Q10981 343 aa17.68■□□□□ 0.42
CPSF1-211ENST00000533492 GPNMBQ14956 572 aa17.68■□□□□ 0.42
CPSF1-211ENST00000533492 TRIM71Q2Q1W2 868 aaKnown RBP17.68■□□□□ 0.42
CPSF1-211ENST00000533492 SERINC5Q86VE9 423 aa17.68■□□□□ 0.42
CPSF1-211ENST00000533492 TRIM50Q86XT4 487 aa17.68■□□□□ 0.42
CPSF1-211ENST00000533492 HERC6Q8IVU3 1022 aa17.68■□□□□ 0.42
CPSF1-211ENST00000533492 PPM1EQ8WY54 764 aa17.68■□□□□ 0.42
CPSF1-211ENST00000533492 SEPT1Q8WYJ6 367 aa17.68■□□□□ 0.42
CPSF1-211ENST00000533492 BRF1Q92994 677 aa17.68■□□□□ 0.42
CPSF1-211ENST00000533492 WNT8BQ93098 351 aa17.68■□□□□ 0.42
CPSF1-211ENST00000533492 GLT8D2Q9H1C3 349 aa17.68■□□□□ 0.42
CPSF1-211ENST00000533492 JADE2Q9NQC1 790 aa17.68■□□□□ 0.42
CPSF1-211ENST00000533492 FAM217BQ9NTX9 383 aaPredicted RBP17.68■□□□□ 0.42
CPSF1-211ENST00000533492 PKD2L1Q9P0L9 805 aa17.68■□□□□ 0.42
CPSF1-211ENST00000533492 ABHD14A-ACY1A0A1B0GW23 586 aa17.67■□□□□ 0.42
CPSF1-211ENST00000533492 RSPH10B2B2RC85 870 aa17.67■□□□□ 0.42
CPSF1-211ENST00000533492 TREHO43280 583 aa17.67■□□□□ 0.42
CPSF1-211ENST00000533492 CA3P07451 260 aa17.67■□□□□ 0.42
CPSF1-211ENST00000533492 RSPH10BP0C881 870 aa17.67■□□□□ 0.42
CPSF1-211ENST00000533492 KCNA2P16389 499 aa17.67■□□□□ 0.42
CPSF1-211ENST00000533492 TCF7P36402 384 aaPredicted RBP17.67■□□□□ 0.42
CPSF1-211ENST00000533492 IKBKEQ14164 716 aa17.67■□□□□ 0.42
CPSF1-211ENST00000533492 TYW1BQ6NUM6 668 aa17.67■□□□□ 0.42
CPSF1-211ENST00000533492 ZBED2Q9BTP6 218 aa17.67■□□□□ 0.42
CPSF1-211ENST00000533492 SETD4Q9NVD3 440 aa17.67■□□□□ 0.42
CPSF1-211ENST00000533492 BARHL2Q9NY43 387 aa17.67■□□□□ 0.42
CPSF1-211ENST00000533492 TELO2Q9Y4R8 837 aa17.67■□□□□ 0.42
CPSF1-211ENST00000533492 EMSYQ7Z589 1322 aa17.67■□□□□ 0.42
CPSF1-211ENST00000533492 KAT6AQ92794 2004 aa17.66■□□□□ 0.42
CPSF1-211ENST00000533492 STXBP3O00186 592 aa17.66■□□□□ 0.42
CPSF1-211ENST00000533492 EFCAB14O75071 495 aa17.66■□□□□ 0.42
CPSF1-211ENST00000533492 WDR5P61964 334 aaKnown RBP17.66■□□□□ 0.42
CPSF1-211ENST00000533492 GLG1Q92896 1179 aa17.66■□□□□ 0.42
CPSF1-211ENST00000533492 PGBD1Q96JS3 809 aa17.66■□□□□ 0.42
CPSF1-211ENST00000533492 MXRA8Q9BRK3 442 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms