RNA–Protein interactions for RNA: ENST00000533362.1

PUF60-222, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-222ENST00000533362 AGO4Q9HCK5 861 aaKnown RBP25.49■■□□□ 1.67
PUF60-222ENST00000533362 MYL3P08590 195 aa25.48■■□□□ 1.67
PUF60-222ENST00000533362 PTGS1P23219 599 aa25.48■■□□□ 1.67
PUF60-222ENST00000533362 CYP2W1Q8TAV3 490 aa25.48■■□□□ 1.67
PUF60-222ENST00000533362 FERMT2Q96AC1 680 aa25.48■■□□□ 1.67
PUF60-222ENST00000533362 VTI1AQ96AJ9 217 aa25.48■■□□□ 1.67
PUF60-222ENST00000533362 MTG1Q9BT17 334 aaPredicted RBP25.48■■□□□ 1.67
PUF60-222ENST00000533362 CYP3A7-CYP3A51PA0A087WV96 503 aa25.47■■□□□ 1.67
PUF60-222ENST00000533362 A0A0U1RQG5 324 aaPredicted RBP25.47■■□□□ 1.67
PUF60-222ENST00000533362 PPFIA4O75335 1185 aa25.47■■□□□ 1.67
PUF60-222ENST00000533362 HSP90AA1P07900 732 aaKnown RBP25.47■■□□□ 1.67
PUF60-222ENST00000533362 CYP3A7P24462 503 aa25.47■■□□□ 1.67
PUF60-222ENST00000533362 PURAQ00577 322 aaKnown RBP25.47■■□□□ 1.67
PUF60-222ENST00000533362 LETM2Q2VYF4 491 aa25.47■■□□□ 1.67
PUF60-222ENST00000533362 Q4G0T1 1027 aa25.47■■□□□ 1.67
PUF60-222ENST00000533362 C1orf53Q5VUE5 145 aa25.47■■□□□ 1.67
PUF60-222ENST00000533362 PPP4R3AQ6IN85 833 aa25.47■■□□□ 1.67
PUF60-222ENST00000533362 CXCL17Q6UXB2 119 aa25.47■■□□□ 1.67
PUF60-222ENST00000533362 ZNF577Q9BSK1 485 aa25.47■■□□□ 1.67
PUF60-222ENST00000533362 JPH1Q9HDC5 661 aaPredicted RBP25.47■■□□□ 1.67
PUF60-222ENST00000533362 TBC1D22BQ9NU19 505 aa25.47■■□□□ 1.67
PUF60-222ENST00000533362 IPO5O00410 1097 aaKnown RBP25.46■■□□□ 1.67
PUF60-222ENST00000533362 ARP10275 920 aa25.46■■□□□ 1.67
PUF60-222ENST00000533362 IRX5P78411 483 aaPredicted RBP25.46■■□□□ 1.67
PUF60-222ENST00000533362 LARP1BQ659C4 914 aaKnown RBP25.46■■□□□ 1.67
PUF60-222ENST00000533362 SLC39A5Q6ZMH5 540 aa25.46■■□□□ 1.67
PUF60-222ENST00000533362 KATNAL1Q9BW62 490 aa25.46■■□□□ 1.67
PUF60-222ENST00000533362 PKD2L1Q9P0L9 805 aa25.46■■□□□ 1.67
PUF60-222ENST00000533362 MROH7Q68CQ1 1323 aa25.45■■□□□ 1.66
PUF60-222ENST00000533362 ATP9AO75110 1047 aa25.45■■□□□ 1.66
PUF60-222ENST00000533362 HOXD8P13378 290 aaPredicted RBP25.45■■□□□ 1.66
PUF60-222ENST00000533362 HSDL1Q3SXM5 330 aa25.45■■□□□ 1.66
PUF60-222ENST00000533362 NOSTRINQ8IVI9 506 aa25.45■■□□□ 1.66
PUF60-222ENST00000533362 SLC9A2Q9UBY0 812 aa25.45■■□□□ 1.66
PUF60-222ENST00000533362 DDX25Q9UHL0 483 aaKnown RBP25.45■■□□□ 1.66
PUF60-222ENST00000533362 SORBS3O60504 671 aa25.44■■□□□ 1.66
PUF60-222ENST00000533362 CCNT1O60563 726 aaKnown RBP25.44■■□□□ 1.66
PUF60-222ENST00000533362 SNX17Q15036 470 aa25.44■■□□□ 1.66
PUF60-222ENST00000533362 MBOAT7Q96N66 472 aa25.44■■□□□ 1.66
PUF60-222ENST00000533362 GPR20Q99678 358 aa25.44■■□□□ 1.66
PUF60-222ENST00000533362 NOL7Q9UMY1 257 aaKnown RBP25.44■■□□□ 1.66
PUF60-222ENST00000533362 TDP2O95551 362 aa25.43■■□□□ 1.66
PUF60-222ENST00000533362 ATN1P54259 1190 aaPredicted RBP25.43■■□□□ 1.66
PUF60-222ENST00000533362 SEPT1Q8WYJ6 367 aa25.43■■□□□ 1.66
PUF60-222ENST00000533362 DPF3Q92784 378 aa25.43■■□□□ 1.66
PUF60-222ENST00000533362 LENG9Q96B70 501 aa25.43■■□□□ 1.66
PUF60-222ENST00000533362 RIT2Q99578 217 aa25.43■■□□□ 1.66
PUF60-222ENST00000533362 EVI5O60447 810 aa25.42■■□□□ 1.66
PUF60-222ENST00000533362 U2AF2P26368 475 aaKnown RBP eCLIP25.42■■□□□ 1.66
PUF60-222ENST00000533362 TRAPPC10P48553 1259 aa25.42■■□□□ 1.66
PUF60-222ENST00000533362 KRT76Q01546 638 aa25.42■■□□□ 1.66
PUF60-222ENST00000533362 SP4Q02446 784 aa25.42■■□□□ 1.66
PUF60-222ENST00000533362 ITGB3BPQ13352 177 aaPredicted RBP25.42■■□□□ 1.66
PUF60-222ENST00000533362 ORC2Q13416 577 aaPredicted RBP25.42■■□□□ 1.66
PUF60-222ENST00000533362 MCTP1Q6DN14 999 aa25.42■■□□□ 1.66
PUF60-222ENST00000533362 ZNF215Q9UL58 517 aaPredicted RBP25.42■■□□□ 1.66
PUF60-222ENST00000533362 NR2E3Q9Y5X4 410 aa25.42■■□□□ 1.66
PUF60-222ENST00000533362 ARVCFO00192 962 aa25.41■■□□□ 1.66
PUF60-222ENST00000533362 TBX3O15119 743 aa25.41■■□□□ 1.66
PUF60-222ENST00000533362 MSH4O15457 936 aa25.41■■□□□ 1.66
PUF60-222ENST00000533362 F2P00734 622 aa25.41■■□□□ 1.66
PUF60-222ENST00000533362 RTP1P59025 263 aa25.41■■□□□ 1.66
PUF60-222ENST00000533362 ITGA7Q13683 1181 aa25.41■■□□□ 1.66
PUF60-222ENST00000533362 BECN1Q14457 450 aa25.41■■□□□ 1.66
PUF60-222ENST00000533362 LRRC26Q2I0M4 334 aa25.41■■□□□ 1.66
PUF60-222ENST00000533362 EARS2Q5JPH6 523 aaKnown RBP25.41■■□□□ 1.66
PUF60-222ENST00000533362 EDIL3O43854 480 aa25.4■■□□□ 1.66
PUF60-222ENST00000533362 MARCH6O60337 910 aa25.4■■□□□ 1.66
PUF60-222ENST00000533362 GAS7O60861 476 aa25.4■■□□□ 1.66
PUF60-222ENST00000533362 PDIA4P13667 645 aaKnown RBP25.4■■□□□ 1.66
PUF60-222ENST00000533362 PTPN11Q06124 597 aaPredicted RBP25.4■■□□□ 1.66
PUF60-222ENST00000533362 ZNF746Q6NUN9 644 aaPredicted RBP25.4■■□□□ 1.66
PUF60-222ENST00000533362 SMAP1Q8IYB5 467 aaPredicted RBP25.4■■□□□ 1.66
PUF60-222ENST00000533362 SLC5A5Q92911 643 aa25.4■■□□□ 1.66
PUF60-222ENST00000533362 FAM20AQ96MK3 541 aa25.4■■□□□ 1.66
PUF60-222ENST00000533362 TEKT3Q9BXF9 490 aa25.4■■□□□ 1.66
PUF60-222ENST00000533362 ATP11BQ9Y2G3 1177 aa25.4■■□□□ 1.66
PUF60-222ENST00000533362 FAM205CA6NFA0 338 aa25.39■■□□□ 1.66
PUF60-222ENST00000533362 TLR3O15455 904 aaKnown RBP25.39■■□□□ 1.66
PUF60-222ENST00000533362 BAG4O95429 457 aaKnown RBP25.39■■□□□ 1.66
PUF60-222ENST00000533362 LGALS2P05162 132 aa25.39■■□□□ 1.66
PUF60-222ENST00000533362 TCF7P36402 384 aaPredicted RBP25.39■■□□□ 1.66
PUF60-222ENST00000533362 ACTR2P61160 394 aa25.39■■□□□ 1.66
PUF60-222ENST00000533362 LRCH2Q5VUJ6 765 aa25.39■■□□□ 1.66
PUF60-222ENST00000533362 NFRKBQ6P4R8 1299 aa25.39■■□□□ 1.66
PUF60-222ENST00000533362 SLFN12Q8IYM2 578 aa25.39■■□□□ 1.66
PUF60-222ENST00000533362 TOX2Q96NM4 488 aa25.39■■□□□ 1.66
PUF60-222ENST00000533362 AZI2Q9H6S1 392 aa25.39■■□□□ 1.66
PUF60-222ENST00000533362 BCAS3Q9H6U6 928 aa25.39■■□□□ 1.66
PUF60-222ENST00000533362 SCN10AQ9Y5Y9 1956 aa25.38■■□□□ 1.65
PUF60-222ENST00000533362 DCDC2CA8MYV0 355 aa25.38■■□□□ 1.65
PUF60-222ENST00000533362 DHX15O43143 795 aaKnown RBP25.38■■□□□ 1.65
PUF60-222ENST00000533362 ZNF286BP0CG31 522 aa25.38■■□□□ 1.65
PUF60-222ENST00000533362 MFSD10Q14728 455 aa25.38■■□□□ 1.65
PUF60-222ENST00000533362 TRIM60Q495X7 471 aa25.38■■□□□ 1.65
PUF60-222ENST00000533362 MIS18BP1Q6P0N0 1132 aa25.38■■□□□ 1.65
PUF60-222ENST00000533362 ANKRD33Q7Z3H0 272 aa25.38■■□□□ 1.65
PUF60-222ENST00000533362 SLC43A3Q8NBI5 491 aa25.38■■□□□ 1.65
PUF60-222ENST00000533362 ETNPPLQ8TBG4 499 aa25.38■■□□□ 1.65
PUF60-222ENST00000533362 MKI67P46013 3256 aaKnown RBP25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms