RNA–Protein interactions for RNA: ENST00000533129.5

CAPN1-224, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CAPN1, Length 2,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-224ENST00000533129 TBC1D16Q8TBP0 767 aa16.3■□□□□ 0.2
CAPN1-224ENST00000533129 RASGRP4Q8TDF6 673 aa16.3■□□□□ 0.2
CAPN1-224ENST00000533129 IFT81Q8WYA0 676 aa16.3■□□□□ 0.2
CAPN1-224ENST00000533129 JPH2Q9BR39 696 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-224ENST00000533129 SEMA6BQ9H3T3 888 aa16.3■□□□□ 0.2
CAPN1-224ENST00000533129 TCP11L1Q9NUJ3 509 aa16.3■□□□□ 0.2
CAPN1-224ENST00000533129 NMT2O60551 498 aa16.29■□□□□ 0.2
CAPN1-224ENST00000533129 RASSF9O75901 435 aa16.29■□□□□ 0.2
CAPN1-224ENST00000533129 DYNLL1P63167 89 aaKnown RBP16.29■□□□□ 0.2
CAPN1-224ENST00000533129 AMPD3Q01432 767 aa16.29■□□□□ 0.2
CAPN1-224ENST00000533129 C6orf89Q6UWU4 347 aa16.29■□□□□ 0.2
CAPN1-224ENST00000533129 EIF1ADQ8N9N8 165 aaKnown RBP16.29■□□□□ 0.2
CAPN1-224ENST00000533129 MMRN2Q9H8L6 949 aa16.29■□□□□ 0.2
CAPN1-224ENST00000533129 PCDHA6Q9UN73 950 aa16.29■□□□□ 0.2
CAPN1-224ENST00000533129 PCDHA8Q9Y5H6 950 aa16.29■□□□□ 0.2
CAPN1-224ENST00000533129 FGFR1OPO95684 399 aaKnown RBP16.29■□□□□ 0.2
CAPN1-224ENST00000533129 HSPA9P38646 679 aaKnown RBP16.29■□□□□ 0.2
CAPN1-224ENST00000533129 HDLBPQ00341 1268 aaKnown RBP16.29■□□□□ 0.2
CAPN1-224ENST00000533129 RASSF7Q02833 373 aa16.29■□□□□ 0.2
CAPN1-224ENST00000533129 CCDC40Q4G0X9 1142 aa16.29■□□□□ 0.2
CAPN1-224ENST00000533129 RNF187Q5TA31 235 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-224ENST00000533129 PDXDC1Q6P996 788 aa16.29■□□□□ 0.2
CAPN1-224ENST00000533129 LRIG3Q6UXM1 1119 aa16.29■□□□□ 0.2
CAPN1-224ENST00000533129 DZIP1Q86YF9 867 aaKnown RBP16.29■□□□□ 0.2
CAPN1-224ENST00000533129 CCDC13Q8IYE1 715 aa16.29■□□□□ 0.2
CAPN1-224ENST00000533129 KIAA0895Q8NCT3 520 aa16.29■□□□□ 0.2
CAPN1-224ENST00000533129 CASKIN2Q8WXE0 1202 aa16.29■□□□□ 0.2
CAPN1-224ENST00000533129 GPKOWQ92917 476 aaPredicted RBP eCLIP16.29■□□□□ 0.2
CAPN1-224ENST00000533129 CD209Q9NNX6 404 aa16.29■□□□□ 0.2
CAPN1-224ENST00000533129 KLC4Q9NSK0 619 aa16.29■□□□□ 0.2
CAPN1-224ENST00000533129 CCDC88AQ3V6T2 1871 aa16.28■□□□□ 0.2
CAPN1-224ENST00000533129 ESYT3A0FGR9 886 aa16.28■□□□□ 0.2
CAPN1-224ENST00000533129 ZSCAN5CA6NGD5 496 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-224ENST00000533129 USP17L12C9JPN9 530 aa16.28■□□□□ 0.2
CAPN1-224ENST00000533129 USP17L21D6R901 530 aa16.28■□□□□ 0.2
CAPN1-224ENST00000533129 IL1R1P14778 569 aa16.28■□□□□ 0.2
CAPN1-224ENST00000533129 SLC1A4P43007 532 aa16.28■□□□□ 0.2
CAPN1-224ENST00000533129 GFPT1Q06210 699 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-224ENST00000533129 MSL1Q68DK7 614 aa16.28■□□□□ 0.2
CAPN1-224ENST00000533129 ANKRD13CQ8N6S4 541 aa16.28■□□□□ 0.2
CAPN1-224ENST00000533129 ZKSCAN4Q969J2 545 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-224ENST00000533129 MASTLQ96GX5 879 aa16.28■□□□□ 0.2
CAPN1-224ENST00000533129 ACTR5Q9H9F9 607 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-224ENST00000533129 DONSONQ9NYP3 566 aa16.28■□□□□ 0.2
CAPN1-224ENST00000533129 COL11A2P13942 1736 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-224ENST00000533129 C21orf2O43822 256 aa16.28■□□□□ 0.2
CAPN1-224ENST00000533129 KIF1CO43896 1103 aaKnown RBP16.28■□□□□ 0.2
CAPN1-224ENST00000533129 RDXP35241 583 aaKnown RBP16.28■□□□□ 0.2
CAPN1-224ENST00000533129 GUCY2FP51841 1108 aa16.28■□□□□ 0.2
CAPN1-224ENST00000533129 CDC37Q16543 378 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-224ENST00000533129 INF2Q27J81 1249 aa16.28■□□□□ 0.2
CAPN1-224ENST00000533129 GPR101Q96P66 508 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-224ENST00000533129 PLCB1Q9NQ66 1216 aa16.28■□□□□ 0.2
CAPN1-224ENST00000533129 POLLQ9UGP5 575 aa16.28■□□□□ 0.2
CAPN1-224ENST00000533129 BUB1O43683 1085 aa16.27■□□□□ 0.2
CAPN1-224ENST00000533129 LDHBP07195 334 aaKnown RBP16.27■□□□□ 0.2
CAPN1-224ENST00000533129 SEC24CP53992 1094 aa16.27■□□□□ 0.2
CAPN1-224ENST00000533129 HGSNATQ68CP4 663 aa16.27■□□□□ 0.2
CAPN1-224ENST00000533129 TMBIM4Q9HC24 238 aa16.27■□□□□ 0.2
CAPN1-224ENST00000533129 LUC7LQ9NQ29 371 aaKnown RBP16.27■□□□□ 0.2
CAPN1-224ENST00000533129 GOLGA6L10A6NI86 522 aa16.27■□□□□ 0.2
CAPN1-224ENST00000533129 GSTO1P78417 241 aa16.27■□□□□ 0.2
CAPN1-224ENST00000533129 INPP4AQ96PE3 977 aaPredicted RBP16.27■□□□□ 0.2
CAPN1-224ENST00000533129 PLAAQ9Y263 795 aa16.27■□□□□ 0.2
CAPN1-224ENST00000533129 E7EVH7 732 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 MYBP10242 640 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 IFT88Q13099 833 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 NEDD9Q14511 834 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 PREPLQ4J6C6 727 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-224ENST00000533129 FAM47AQ5JRC9 791 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 RCSD1Q6JBY9 416 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 KRT12Q99456 494 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 CRNKL1Q9BZJ0 848 aaKnown RBP16.26■□□□□ 0.19
CAPN1-224ENST00000533129 NUCKS1Q9H1E3 243 aaKnown RBP16.26■□□□□ 0.19
CAPN1-224ENST00000533129 CD248Q9HCU0 757 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 POLD4Q9HCU8 107 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 JAG2Q9Y219 1238 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 C6orf229H3BNL8 230 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 OR52Z1P0C646 297 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 PSEN1P49768 467 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 TNNC1P63316 161 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 CEP85LQ5SZL2 805 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 CACNA2D4Q7Z3S7 1137 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 SYN2Q92777 582 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-224ENST00000533129 CYFIP2Q96F07 1278 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 CEP83Q9Y592 693 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 PCDHGC5Q9Y5F6 944 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 PALMO75781 387 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 BAG6P46379 1132 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 LRRC63Q05C16 580 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 NAB2Q15742 525 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 MEI1Q5TIA1 1274 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 MAATS1Q7Z4T9 603 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 TMX4Q9H1E5 349 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-224ENST00000533129 TAF1DQ9H5J8 278 aaPredicted RBP16.26■□□□□ 0.19
CAPN1-224ENST00000533129 SLC40A1Q9NP59 571 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 MCM8Q9UJA3 840 aa16.26■□□□□ 0.19
CAPN1-224ENST00000533129 GOLGA6L7A0A1B0GV03 622 aa16.25■□□□□ 0.19
CAPN1-224ENST00000533129 HOXA7P31268 230 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-224ENST00000533129 SLC9C1Q4G0N8 1177 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms