RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 CAVIN2O95810 425 aa20.78■□□□□ 0.92
SMPD1-208ENST00000533123 PDE4DQ08499 809 aa20.78■□□□□ 0.92
SMPD1-208ENST00000533123 POSTNQ15063 836 aa20.78■□□□□ 0.92
SMPD1-208ENST00000533123 EEPD1Q7L9B9 569 aa20.78■□□□□ 0.92
SMPD1-208ENST00000533123 SLFN12Q8IYM2 578 aa20.78■□□□□ 0.92
SMPD1-208ENST00000533123 INPP4AQ96PE3 977 aaPredicted RBP20.78■□□□□ 0.92
SMPD1-208ENST00000533123 ZNF577Q9BSK1 485 aa20.78■□□□□ 0.92
SMPD1-208ENST00000533123 ARHGAP39Q9C0H5 1083 aa20.78■□□□□ 0.92
SMPD1-208ENST00000533123 TNPO2O14787 897 aaKnown RBP20.78■□□□□ 0.92
SMPD1-208ENST00000533123 EIF3JO75822 258 aaKnown RBP20.78■□□□□ 0.92
SMPD1-208ENST00000533123 ADCY5O95622 1261 aa20.78■□□□□ 0.92
SMPD1-208ENST00000533123 LONP1P36776 959 aaKnown RBP20.78■□□□□ 0.92
SMPD1-208ENST00000533123 NLRP12P59046 1061 aa20.78■□□□□ 0.92
SMPD1-208ENST00000533123 MORN1Q5T089 497 aa20.78■□□□□ 0.92
SMPD1-208ENST00000533123 NIPA1Q7RTP0 329 aa20.78■□□□□ 0.92
SMPD1-208ENST00000533123 CEP57L1Q8IYX8 460 aa20.78■□□□□ 0.92
SMPD1-208ENST00000533123 FAM20AQ96MK3 541 aa20.78■□□□□ 0.92
SMPD1-208ENST00000533123 PLXNA1Q9UIW2 1896 aa20.78■□□□□ 0.92
SMPD1-208ENST00000533123 MCM3APO60318 1980 aa20.78■□□□□ 0.92
SMPD1-208ENST00000533123 POTEMA6NI47 508 aa20.77■□□□□ 0.92
SMPD1-208ENST00000533123 LACTBP83111 547 aaPredicted RBP20.77■□□□□ 0.92
SMPD1-208ENST00000533123 TMEM266Q2M3C6 531 aa20.77■□□□□ 0.92
SMPD1-208ENST00000533123 DHX40Q8IX18 779 aaKnown RBP20.77■□□□□ 0.92
SMPD1-208ENST00000533123 IPO5O00410 1097 aaKnown RBP20.77■□□□□ 0.91
SMPD1-208ENST00000533123 FXR2P51116 673 aaKnown RBP eCLIP20.77■□□□□ 0.91
SMPD1-208ENST00000533123 NLRX1Q86UT6 975 aa20.77■□□□□ 0.91
SMPD1-208ENST00000533123 ELOA2Q8IYF1 753 aaPredicted RBP20.77■□□□□ 0.91
SMPD1-208ENST00000533123 IGSF22Q8N9C0 903 aa20.77■□□□□ 0.91
SMPD1-208ENST00000533123 MPHOSPH6Q99547 160 aaKnown RBP20.77■□□□□ 0.91
SMPD1-208ENST00000533123 CFHR5Q9BXR6 569 aa20.77■□□□□ 0.91
SMPD1-208ENST00000533123 B4DLN1 442 aa20.76■□□□□ 0.91
SMPD1-208ENST00000533123 STAM2O75886 525 aa20.76■□□□□ 0.91
SMPD1-208ENST00000533123 SLFN14P0C7P3 912 aa20.76■□□□□ 0.91
SMPD1-208ENST00000533123 PSMC4P43686 418 aa20.76■□□□□ 0.91
SMPD1-208ENST00000533123 SEPT14Q6ZU15 432 aa20.76■□□□□ 0.91
SMPD1-208ENST00000533123 NPLOC4Q8TAT6 608 aa20.76■□□□□ 0.91
SMPD1-208ENST00000533123 SLC5A5Q92911 643 aa20.76■□□□□ 0.91
SMPD1-208ENST00000533123 AGO4Q9HCK5 861 aaKnown RBP20.76■□□□□ 0.91
SMPD1-208ENST00000533123 KIAA1217Q5T5P2 1943 aa20.76■□□□□ 0.91
SMPD1-208ENST00000533123 ATP9AO75110 1047 aa20.76■□□□□ 0.91
SMPD1-208ENST00000533123 AFMP43652 599 aa20.76■□□□□ 0.91
SMPD1-208ENST00000533123 SP3Q02447 781 aa20.76■□□□□ 0.91
SMPD1-208ENST00000533123 MAP2K5Q13163 448 aa20.76■□□□□ 0.91
SMPD1-208ENST00000533123 SEMA3FQ13275 785 aa20.76■□□□□ 0.91
SMPD1-208ENST00000533123 E2F4Q16254 413 aa20.76■□□□□ 0.91
SMPD1-208ENST00000533123 LRCH2Q5VUJ6 765 aa20.76■□□□□ 0.91
SMPD1-208ENST00000533123 GPRASP2Q96D09 838 aa20.76■□□□□ 0.91
SMPD1-208ENST00000533123 TRIM44Q96DX7 344 aaPredicted RBP20.76■□□□□ 0.91
SMPD1-208ENST00000533123 MAML3Q96JK9 1138 aa20.76■□□□□ 0.91
SMPD1-208ENST00000533123 TRIM47Q96LD4 638 aa20.76■□□□□ 0.91
SMPD1-208ENST00000533123 HOOK1Q9UJC3 728 aaKnown RBP20.76■□□□□ 0.91
SMPD1-208ENST00000533123 CASP1P29466 404 aa20.75■□□□□ 0.91
SMPD1-208ENST00000533123 GNPTABQ3T906 1256 aa20.75■□□□□ 0.91
SMPD1-208ENST00000533123 ARMCX2Q7L311 632 aa20.75■□□□□ 0.91
SMPD1-208ENST00000533123 AOPEPQ8N6M6 819 aa20.75■□□□□ 0.91
SMPD1-208ENST00000533123 PAGE5Q96GU1 130 aa20.75■□□□□ 0.91
SMPD1-208ENST00000533123 NUDT12Q9BQG2 462 aa20.75■□□□□ 0.91
SMPD1-208ENST00000533123 THSD7BQ9C0I4 1608 aa20.75■□□□□ 0.91
SMPD1-208ENST00000533123 LRWD1Q9UFC0 647 aa20.75■□□□□ 0.91
SMPD1-208ENST00000533123 GJD2Q9UKL4 321 aa20.75■□□□□ 0.91
SMPD1-208ENST00000533123 ZSWIM8A7E2V4 1837 aa20.75■□□□□ 0.91
SMPD1-208ENST00000533123 ASB14A6NK59 587 aa20.74■□□□□ 0.91
SMPD1-208ENST00000533123 GAS7O60861 476 aa20.74■□□□□ 0.91
SMPD1-208ENST00000533123 PSMD10O75832 226 aa20.74■□□□□ 0.91
SMPD1-208ENST00000533123 FCGRTP55899 365 aa20.74■□□□□ 0.91
SMPD1-208ENST00000533123 CAP1Q01518 475 aa20.74■□□□□ 0.91
SMPD1-208ENST00000533123 ITGB3BPQ13352 177 aaPredicted RBP20.74■□□□□ 0.91
SMPD1-208ENST00000533123 PDIA5Q14554 519 aa20.74■□□□□ 0.91
SMPD1-208ENST00000533123 KARSQ15046 597 aaKnown RBP20.74■□□□□ 0.91
SMPD1-208ENST00000533123 RAB34Q9BZG1 259 aa20.74■□□□□ 0.91
SMPD1-208ENST00000533123 DIS3Q9Y2L1 958 aaKnown RBP20.74■□□□□ 0.91
SMPD1-208ENST00000533123 DDX39AO00148 427 aaKnown RBP20.74■□□□□ 0.91
SMPD1-208ENST00000533123 CYP2B6P20813 491 aa20.74■□□□□ 0.91
SMPD1-208ENST00000533123 BMP6P22004 513 aa20.74■□□□□ 0.91
SMPD1-208ENST00000533123 SPIRE1Q08AE8 756 aa20.74■□□□□ 0.91
SMPD1-208ENST00000533123 MORC4Q8TE76 937 aa20.74■□□□□ 0.91
SMPD1-208ENST00000533123 USP6NLQ92738 828 aa20.74■□□□□ 0.91
SMPD1-208ENST00000533123 STAMQ92783 540 aa20.74■□□□□ 0.91
SMPD1-208ENST00000533123 AK8Q96MA6 479 aa20.74■□□□□ 0.91
SMPD1-208ENST00000533123 NAT10Q9H0A0 1025 aaKnown RBP20.74■□□□□ 0.91
SMPD1-208ENST00000533123 SLC5A4Q9NY91 659 aa20.74■□□□□ 0.91
SMPD1-208ENST00000533123 MAN1B1Q9UKM7 699 aa20.74■□□□□ 0.91
SMPD1-208ENST00000533123 VAV3Q9UKW4 847 aa20.74■□□□□ 0.91
SMPD1-208ENST00000533123 MGAMO43451 1857 aa20.74■□□□□ 0.91
SMPD1-208ENST00000533123 MAFGO15525 162 aa20.73■□□□□ 0.91
SMPD1-208ENST00000533123 UBA7P41226 1012 aa20.73■□□□□ 0.91
SMPD1-208ENST00000533123 KANK3Q6NY19 840 aa20.73■□□□□ 0.91
SMPD1-208ENST00000533123 PDXDC2PQ6P474 469 aa20.73■□□□□ 0.91
SMPD1-208ENST00000533123 OTOP1Q7RTM1 612 aa20.73■□□□□ 0.91
SMPD1-208ENST00000533123 SH3RF1Q7Z6J0 888 aa20.73■□□□□ 0.91
SMPD1-208ENST00000533123 ZNF467Q7Z7K2 595 aaPredicted RBP20.73■□□□□ 0.91
SMPD1-208ENST00000533123 FBXO16Q8IX29 292 aaPredicted RBP20.73■□□□□ 0.91
SMPD1-208ENST00000533123 LOC102724159A0A0B4J2E5 919 aa20.73■□□□□ 0.91
SMPD1-208ENST00000533123 BECN2A8MW95 431 aa20.73■□□□□ 0.91
SMPD1-208ENST00000533123 SPATA31C2B4DYI2 1134 aa20.73■□□□□ 0.91
SMPD1-208ENST00000533123 GOLGA6L19H0YKK7 550 aa20.73■□□□□ 0.91
SMPD1-208ENST00000533123 DHX15O43143 795 aaKnown RBP20.73■□□□□ 0.91
SMPD1-208ENST00000533123 PWP2Q15269 919 aaKnown RBP20.73■□□□□ 0.91
SMPD1-208ENST00000533123 IQUBQ8NA54 791 aa20.73■□□□□ 0.91
SMPD1-208ENST00000533123 SOCS4Q8WXH5 440 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms