RNA–Protein interactions for RNA: ENST00000532884.1

PUF60-220, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-220ENST00000532884 JADE2Q9NQC1 790 aa16.51■□□□□ 0.23
PUF60-220ENST00000532884 NOD1Q9Y239 953 aa16.51■□□□□ 0.23
PUF60-220ENST00000532884 LARGE1O95461 756 aa16.5■□□□□ 0.23
PUF60-220ENST00000532884 SUPT20HL2P0C7V6 817 aa16.5■□□□□ 0.23
PUF60-220ENST00000532884 SREBF1P36956 1147 aa16.5■□□□□ 0.23
PUF60-220ENST00000532884 CCL23P55773 120 aa16.5■□□□□ 0.23
PUF60-220ENST00000532884 FPGSQ05932 587 aa16.5■□□□□ 0.23
PUF60-220ENST00000532884 TEX2Q8IWB9 1127 aa16.5■□□□□ 0.23
PUF60-220ENST00000532884 SENP7Q9BQF6 1050 aa16.5■□□□□ 0.23
PUF60-220ENST00000532884 SH3GLB2Q9NR46 395 aa16.5■□□□□ 0.23
PUF60-220ENST00000532884 KCNH7Q9NS40 1196 aa16.5■□□□□ 0.23
PUF60-220ENST00000532884 UMODL1Q5DID0 1318 aa16.49■□□□□ 0.23
PUF60-220ENST00000532884 A0A1W2PPC1 479 aa16.49■□□□□ 0.23
PUF60-220ENST00000532884 ARP10275 920 aa16.49■□□□□ 0.23
PUF60-220ENST00000532884 KCNA2P16389 499 aa16.49■□□□□ 0.23
PUF60-220ENST00000532884 FXR1P51114 621 aaKnown RBP eCLIP16.49■□□□□ 0.23
PUF60-220ENST00000532884 EPHB4P54760 987 aa16.49■□□□□ 0.23
PUF60-220ENST00000532884 SHHQ15465 462 aa16.49■□□□□ 0.23
PUF60-220ENST00000532884 CEP55Q53EZ4 464 aa16.49■□□□□ 0.23
PUF60-220ENST00000532884 MFSD5Q6N075 450 aa16.49■□□□□ 0.23
PUF60-220ENST00000532884 GIMAP8Q8ND71 665 aaPredicted RBP16.49■□□□□ 0.23
PUF60-220ENST00000532884 GPR20Q99678 358 aa16.49■□□□□ 0.23
PUF60-220ENST00000532884 KATNAL1Q9BW62 490 aa16.49■□□□□ 0.23
PUF60-220ENST00000532884 HDAC6Q9UBN7 1215 aa16.49■□□□□ 0.23
PUF60-220ENST00000532884 KCNJ14Q9UNX9 436 aa16.49■□□□□ 0.23
PUF60-220ENST00000532884 H3BRB1 525 aa16.48■□□□□ 0.23
PUF60-220ENST00000532884 MAFGO15525 162 aa16.48■□□□□ 0.23
PUF60-220ENST00000532884 CTDNEP1O95476 244 aa16.48■□□□□ 0.23
PUF60-220ENST00000532884 F2P00734 622 aa16.48■□□□□ 0.23
PUF60-220ENST00000532884 LGALS2P05162 132 aa16.48■□□□□ 0.23
PUF60-220ENST00000532884 CSF2RAP15509 400 aa16.48■□□□□ 0.23
PUF60-220ENST00000532884 PTGISQ16647 500 aa16.48■□□□□ 0.23
PUF60-220ENST00000532884 C9orf50Q5SZB4 431 aa16.48■□□□□ 0.23
PUF60-220ENST00000532884 MCTP2Q6DN12 878 aa16.48■□□□□ 0.23
PUF60-220ENST00000532884 GDF6Q6KF10 455 aaPredicted RBP16.48■□□□□ 0.23
PUF60-220ENST00000532884 TRIM50Q86XT4 487 aa16.48■□□□□ 0.23
PUF60-220ENST00000532884 TMEM199Q8N511 208 aa16.48■□□□□ 0.23
PUF60-220ENST00000532884 C16orf70Q9BSU1 422 aa16.48■□□□□ 0.23
PUF60-220ENST00000532884 NOC4LQ9BVI4 516 aaKnown RBP16.48■□□□□ 0.23
PUF60-220ENST00000532884 TUT1Q9H6E5 874 aaKnown RBP16.48■□□□□ 0.23
PUF60-220ENST00000532884 UPF2Q9HAU5 1272 aaKnown RBP16.48■□□□□ 0.23
PUF60-220ENST00000532884 GJB4Q9NTQ9 266 aa16.48■□□□□ 0.23
PUF60-220ENST00000532884 ORC3Q9UBD5 711 aaPredicted RBP16.48■□□□□ 0.23
PUF60-220ENST00000532884 MYH7BA7E2Y1 1941 aa16.48■□□□□ 0.23
PUF60-220ENST00000532884 FAM86B1E9PN63 330 aa16.47■□□□□ 0.23
PUF60-220ENST00000532884 MEIS1O00470 390 aa16.47■□□□□ 0.23
PUF60-220ENST00000532884 FAM86B2P0C5J1 330 aa16.47■□□□□ 0.23
PUF60-220ENST00000532884 ACRP10323 421 aa16.47■□□□□ 0.23
PUF60-220ENST00000532884 HOXD8P13378 290 aaPredicted RBP16.47■□□□□ 0.23
PUF60-220ENST00000532884 FOSBP53539 338 aa16.47■□□□□ 0.23
PUF60-220ENST00000532884 ZNF200P98182 395 aaPredicted RBP16.47■□□□□ 0.23
PUF60-220ENST00000532884 PTPN11Q06124 597 aaPredicted RBP16.47■□□□□ 0.23
PUF60-220ENST00000532884 PLA2G4DQ86XP0 818 aa16.47■□□□□ 0.23
PUF60-220ENST00000532884 BLIDQ8IZY5 108 aa16.47■□□□□ 0.23
PUF60-220ENST00000532884 GTF3C6Q969F1 213 aa16.47■□□□□ 0.23
PUF60-220ENST00000532884 KIF2CQ99661 725 aa16.47■□□□□ 0.23
PUF60-220ENST00000532884 SDF4Q9BRK5 362 aa16.47■□□□□ 0.23
PUF60-220ENST00000532884 AGO4Q9HCK5 861 aaKnown RBP16.47■□□□□ 0.23
PUF60-220ENST00000532884 PCDHA4Q9UN74 947 aa16.47■□□□□ 0.23
PUF60-220ENST00000532884 LIMCH1Q9UPQ0 1083 aa16.47■□□□□ 0.23
PUF60-220ENST00000532884 GTF3C3Q9Y5Q9 886 aa16.47■□□□□ 0.23
PUF60-220ENST00000532884 DDX39AO00148 427 aaKnown RBP16.46■□□□□ 0.23
PUF60-220ENST00000532884 HAS3O00219 553 aa16.46■□□□□ 0.23
PUF60-220ENST00000532884 SOX1O00570 391 aaPredicted RBP16.46■□□□□ 0.23
PUF60-220ENST00000532884 TCF7P36402 384 aaPredicted RBP16.46■□□□□ 0.23
PUF60-220ENST00000532884 PRR16Q569H4 304 aa16.46■□□□□ 0.23
PUF60-220ENST00000532884 SEPT1Q8WYJ6 367 aa16.46■□□□□ 0.23
PUF60-220ENST00000532884 SCLYQ96I15 445 aa16.46■□□□□ 0.23
PUF60-220ENST00000532884 LRCH3Q96II8 777 aa16.46■□□□□ 0.23
PUF60-220ENST00000532884 JPH1Q9HDC5 661 aaPredicted RBP16.46■□□□□ 0.23
PUF60-220ENST00000532884 GTF2IRD1Q9UHL9 959 aa16.46■□□□□ 0.23
PUF60-220ENST00000532884 GSTTP1A0A1W2PQM5 241 aa16.45■□□□□ 0.22
PUF60-220ENST00000532884 CYP3A4P08684 503 aa16.45■□□□□ 0.22
PUF60-220ENST00000532884 XBP1P17861 261 aa16.45■□□□□ 0.22
PUF60-220ENST00000532884 MARK3P27448 753 aa16.45■□□□□ 0.22
PUF60-220ENST00000532884 ITGB3BPQ13352 177 aaPredicted RBP16.45■□□□□ 0.22
PUF60-220ENST00000532884 PPIGQ13427 754 aaKnown RBP eCLIP16.45■□□□□ 0.221e-7■■□□□ 12.7
PUF60-220ENST00000532884 RETREG2Q8NC44 543 aa16.45■□□□□ 0.22
PUF60-220ENST00000532884 CRYGNQ8WXF5 182 aa16.45■□□□□ 0.22
PUF60-220ENST00000532884 GLG1Q92896 1179 aa16.45■□□□□ 0.22
PUF60-220ENST00000532884 WNT8AQ9H1J5 351 aa16.45■□□□□ 0.22
PUF60-220ENST00000532884 SLC9A2Q9UBY0 812 aa16.45■□□□□ 0.22
PUF60-220ENST00000532884 SCN10AQ9Y5Y9 1956 aa16.45■□□□□ 0.22
PUF60-220ENST00000532884 LTBP2Q14767 1821 aa16.45■□□□□ 0.22
PUF60-220ENST00000532884 STK36Q9NRP7 1315 aa16.45■□□□□ 0.22
PUF60-220ENST00000532884 JAK2O60674 1132 aa16.44■□□□□ 0.22
PUF60-220ENST00000532884 SMIM10L2AP0DMW4 78 aa16.44■□□□□ 0.22
PUF60-220ENST00000532884 SMIM10L2BP0DMW5 78 aa16.44■□□□□ 0.22
PUF60-220ENST00000532884 RBM25P49756 843 aaKnown RBP16.44■□□□□ 0.22
PUF60-220ENST00000532884 HIC1Q14526 733 aa16.44■□□□□ 0.22
PUF60-220ENST00000532884 C16orf59Q7L2K0 433 aa16.44■□□□□ 0.22
PUF60-220ENST00000532884 NIPA1Q7RTP0 329 aa16.44■□□□□ 0.22
PUF60-220ENST00000532884 DEFB128Q7Z7B8 93 aa16.44■□□□□ 0.22
PUF60-220ENST00000532884 SESTD1Q86VW0 696 aa16.44■□□□□ 0.22
PUF60-220ENST00000532884 CCDC83Q8IWF9 413 aa16.44■□□□□ 0.22
PUF60-220ENST00000532884 NSUN7Q8NE18 718 aaKnown RBP16.44■□□□□ 0.22
PUF60-220ENST00000532884 TBCKQ8TEA7 893 aa16.44■□□□□ 0.22
PUF60-220ENST00000532884 WASF1Q92558 559 aa16.44■□□□□ 0.22
PUF60-220ENST00000532884 RNPC3Q96LT9 517 aaKnown RBP16.44■□□□□ 0.22
PUF60-220ENST00000532884 ZNF577Q9BSK1 485 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms