RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	MAD2L2	Q9UI95	211 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	PTPRS	Q13332	1948 aa		11.15	□□□□□ -0.62
PPFIA1-223	ENST00000532793	DOCK5	Q9H7D0	1870 aa		11.15	□□□□□ -0.63
PPFIA1-223	ENST00000532793	PALM3	A6NDB9	673 aa	Predicted RBP	11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	TNFRSF10A	O00220	468 aa		11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	NOP56	O00567	594 aa	Known RBP	11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	EFCAB14	O75071	495 aa		11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	GGPS1	O95749	300 aa		11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	CYP21A2	P08686	494 aa		11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	ZNF286B	P0CG31	522 aa		11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	TGFB3	P10600	412 aa		11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	HOXA13	P31271	388 aa	Predicted RBP	11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	ADGRE1	Q14246	886 aa		11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	CNKSR3	Q6P9H4	555 aa		11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	CASC1	Q6TDU7	716 aa		11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	HERC6	Q8IVU3	1022 aa		11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	CTCFL	Q8NI51	663 aa	Predicted RBP	11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	SMARCC2	Q8TAQ2	1214 aa		11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	ASB2	Q96Q27	587 aa		11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	PIGS	Q96S52	555 aa		11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	CERS4	Q9HA82	394 aa		11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	PRDM6	Q9NQX0	595 aa		11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	HDAC6	Q9UBN7	1215 aa		11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	SEC63	Q9UGP8	760 aa	Known RBP	11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	BAZ2B	Q9UIF8	2168 aa	Known RBP	11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	COL4A4	P53420	1690 aa	Predicted RBP	11.14	□□□□□ -0.63
PPFIA1-223	ENST00000532793	PNMA6F	A0A0J9YX94	578 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793		E7EWF7	191 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	SORBS3	O60504	671 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	PPFIA4	O75335	1185 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	STAM2	O75886	525 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	F2	P00734	622 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	CKB	P12277	381 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	GSPT1	P15170	499 aa	Known RBP	11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	CHML	P26374	656 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	KIF5B	P33176	963 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	GHRHR	Q02643	423 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	PTK7	Q13308	1070 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	DSG2	Q14126	1118 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	IKBKE	Q14164	716 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	CELF3	Q5SZQ8	465 aa	Known RBP	11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	NFXL1	Q6ZNB6	911 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	STOX1	Q6ZVD7	989 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	TET1	Q8NFU7	2136 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	ARNTL2	Q8WYA1	636 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	KAT2B	Q92831	832 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	MTMR8	Q96EF0	704 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	RIOX1	Q9H6W3	641 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	SI	P14410	1827 aa		11.13	□□□□□ -0.63
PPFIA1-223	ENST00000532793	EMSY	Q7Z589	1322 aa		11.12	□□□□□ -0.63
PPFIA1-223	ENST00000532793	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.12	□□□□□ -0.63
PPFIA1-223	ENST00000532793	PDE4A	P27815	886 aa		11.12	□□□□□ -0.63
PPFIA1-223	ENST00000532793	WDR5	P61964	334 aa	Known RBP	11.12	□□□□□ -0.63
PPFIA1-223	ENST00000532793	PTH1R	Q03431	593 aa		11.12	□□□□□ -0.63
PPFIA1-223	ENST00000532793	NEDD9	Q14511	834 aa		11.12	□□□□□ -0.63
PPFIA1-223	ENST00000532793	MYSM1	Q5VVJ2	828 aa		11.12	□□□□□ -0.63
PPFIA1-223	ENST00000532793	VSIG10L	Q86VR7	867 aa		11.12	□□□□□ -0.63
PPFIA1-223	ENST00000532793	ADAMTS19	Q8TE59	1207 aa		11.12	□□□□□ -0.63
PPFIA1-223	ENST00000532793	PIBF1	Q8WXW3	757 aa		11.12	□□□□□ -0.63
PPFIA1-223	ENST00000532793	RRP36	Q96EU6	259 aa	Known RBP	11.12	□□□□□ -0.63
PPFIA1-223	ENST00000532793	IL25	Q9H293	177 aa		11.12	□□□□□ -0.63
PPFIA1-223	ENST00000532793	TCF20	Q9UGU0	1960 aa	Known RBP	11.12	□□□□□ -0.63
PPFIA1-223	ENST00000532793	MICAL3	Q7RTP6	2002 aa		11.11	□□□□□ -0.63
PPFIA1-223	ENST00000532793	C17orf102	A2RUQ5	167 aa		11.11	□□□□□ -0.63
PPFIA1-223	ENST00000532793	CCDC69	A6NI79	296 aa		11.11	□□□□□ -0.63
PPFIA1-223	ENST00000532793		H3BRB1	525 aa		11.11	□□□□□ -0.63
PPFIA1-223	ENST00000532793	OPLAH	O14841	1288 aa		11.11	□□□□□ -0.63
PPFIA1-223	ENST00000532793	PPP1R11	O60927	126 aa	Predicted RBP	11.11	□□□□□ -0.63
PPFIA1-223	ENST00000532793	DDAH1	O94760	285 aa		11.11	□□□□□ -0.63
PPFIA1-223	ENST00000532793	GNAT1	P11488	350 aa		11.11	□□□□□ -0.63
PPFIA1-223	ENST00000532793	UBA1	P22314	1058 aa	Known RBP	11.11	□□□□□ -0.63
PPFIA1-223	ENST00000532793	THPO	P40225	353 aa		11.11	□□□□□ -0.63
PPFIA1-223	ENST00000532793	GNAQ	P50148	359 aa		11.11	□□□□□ -0.63
PPFIA1-223	ENST00000532793	FOSB	P53539	338 aa		11.11	□□□□□ -0.63
PPFIA1-223	ENST00000532793	TAP1	Q03518	808 aa		11.11	□□□□□ -0.63
PPFIA1-223	ENST00000532793	KCNC4	Q03721	635 aa		11.11	□□□□□ -0.63
PPFIA1-223	ENST00000532793	RBL2	Q08999	1139 aa		11.11	□□□□□ -0.63
PPFIA1-223	ENST00000532793	HSDL1	Q3SXM5	330 aa		11.11	□□□□□ -0.63
PPFIA1-223	ENST00000532793	UHRF1	Q96T88	793 aa	Predicted RBP	11.11	□□□□□ -0.63
PPFIA1-223	ENST00000532793	TUT1	Q9H6E5	874 aa	Known RBP	11.11	□□□□□ -0.63
PPFIA1-223	ENST00000532793	ZNF215	Q9UL58	517 aa	Predicted RBP	11.11	□□□□□ -0.63
PPFIA1-223	ENST00000532793	HAS3	O00219	553 aa		11.1	□□□□□ -0.63
PPFIA1-223	ENST00000532793	RFXAP	O00287	272 aa		11.1	□□□□□ -0.63
PPFIA1-223	ENST00000532793	NRG2	O14511	850 aa	Predicted RBP	11.1	□□□□□ -0.63
PPFIA1-223	ENST00000532793	SGSM2	O43147	1006 aa		11.1	□□□□□ -0.63
PPFIA1-223	ENST00000532793	FIBP	O43427	364 aa		11.1	□□□□□ -0.63
PPFIA1-223	ENST00000532793	AMH	P03971	560 aa		11.1	□□□□□ -0.63
PPFIA1-223	ENST00000532793	CALM1	P0DP23	149 aa		11.1	□□□□□ -0.63
PPFIA1-223	ENST00000532793	CALM2	P0DP24	149 aa		11.1	□□□□□ -0.63
PPFIA1-223	ENST00000532793	CALM3	P0DP25	149 aa		11.1	□□□□□ -0.63
PPFIA1-223	ENST00000532793	TROAP	Q12815	778 aa		11.1	□□□□□ -0.63
PPFIA1-223	ENST00000532793	ZNF618	Q5T7W0	954 aa		11.1	□□□□□ -0.63
PPFIA1-223	ENST00000532793	NLRX1	Q86UT6	975 aa		11.1	□□□□□ -0.63
PPFIA1-223	ENST00000532793	ZNF654	Q8IZM8	581 aa		11.1	□□□□□ -0.63
PPFIA1-223	ENST00000532793	TMTC2	Q8N394	836 aa		11.1	□□□□□ -0.63
PPFIA1-223	ENST00000532793	IL31RA	Q8NI17	732 aa		11.1	□□□□□ -0.63
PPFIA1-223	ENST00000532793	DHX38	Q92620	1227 aa	Known RBP	11.1	□□□□□ -0.63
PPFIA1-223	ENST00000532793	ATP6V0A1	Q93050	837 aa		11.1	□□□□□ -0.63
PPFIA1-223	ENST00000532793	VWCE	Q96DN2	955 aa		11.1	□□□□□ -0.63

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