RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 CYP46A1Q9Y6A2 500 aa19.74■□□□□ 0.75
PHRF1-204ENST00000532550 AKAP17AQ02040 695 aaKnown RBP19.73■□□□□ 0.75
PHRF1-204ENST00000532550 PFKFB3Q16875 520 aaPredicted RBP19.73■□□□□ 0.75
PHRF1-204ENST00000532550 GPR20Q99678 358 aa19.73■□□□□ 0.75
PHRF1-204ENST00000532550 STXBP5LQ9Y2K9 1186 aa19.73■□□□□ 0.75
PHRF1-204ENST00000532550 UBIAD1Q9Y5Z9 338 aa19.73■□□□□ 0.75
PHRF1-204ENST00000532550 PRPF3O43395 683 aaKnown RBP19.72■□□□□ 0.75
PHRF1-204ENST00000532550 LGALS2P05162 132 aa19.72■□□□□ 0.75
PHRF1-204ENST00000532550 ACTN1P12814 892 aa19.72■□□□□ 0.75
PHRF1-204ENST00000532550 SCG2P13521 617 aa19.72■□□□□ 0.75
PHRF1-204ENST00000532550 ITGB5P18084 799 aa19.72■□□□□ 0.75
PHRF1-204ENST00000532550 SP4Q02446 784 aa19.72■□□□□ 0.75
PHRF1-204ENST00000532550 MTMR1Q13613 665 aa19.72■□□□□ 0.75
PHRF1-204ENST00000532550 AFAP1L1Q8TED9 768 aa19.72■□□□□ 0.75
PHRF1-204ENST00000532550 TM6SF1Q9BZW5 370 aa19.72■□□□□ 0.75
PHRF1-204ENST00000532550 FTOQ9C0B1 505 aaKnown RBP eCLIP19.72■□□□□ 0.75
PHRF1-204ENST00000532550 JADE2Q9NQC1 790 aa19.72■□□□□ 0.75
PHRF1-204ENST00000532550 CXXC1Q9P0U4 656 aaPredicted RBP19.72■□□□□ 0.75
PHRF1-204ENST00000532550 SLC4A7Q9Y6M7 1214 aa19.72■□□□□ 0.75
PHRF1-204ENST00000532550 DOCK5Q9H7D0 1870 aa19.71■□□□□ 0.75
PHRF1-204ENST00000532550 TMEM265A0A087WTH1 108 aa19.71■□□□□ 0.75
PHRF1-204ENST00000532550 ZBBXA8MT70 800 aa19.71■□□□□ 0.75
PHRF1-204ENST00000532550 GRXCR1A8MXD5 290 aa19.71■□□□□ 0.75
PHRF1-204ENST00000532550 ATP9AO75110 1047 aa19.71■□□□□ 0.75
PHRF1-204ENST00000532550 DNAJB2P25686 324 aa19.71■□□□□ 0.75
PHRF1-204ENST00000532550 PDIA3P30101 505 aaKnown RBP19.71■□□□□ 0.75
PHRF1-204ENST00000532550 EVCP57679 992 aa19.71■□□□□ 0.75
PHRF1-204ENST00000532550 PTK7Q13308 1070 aa19.71■□□□□ 0.75
PHRF1-204ENST00000532550 UTP14CQ5TAP6 766 aaKnown RBP19.71■□□□□ 0.75
PHRF1-204ENST00000532550 CCDC12Q8WUD4 166 aaPredicted RBP19.71■□□□□ 0.75
PHRF1-204ENST00000532550 GUCD1Q96NT3 240 aa19.71■□□□□ 0.75
PHRF1-204ENST00000532550 CTAGE1Q96RT6 745 aa19.71■□□□□ 0.75
PHRF1-204ENST00000532550 MSRAQ9UJ68 235 aa19.71■□□□□ 0.75
PHRF1-204ENST00000532550 SCN5AQ14524 2016 aa19.7■□□□□ 0.74
PHRF1-204ENST00000532550 C17orf102A2RUQ5 167 aa19.7■□□□□ 0.74
PHRF1-204ENST00000532550 SELPP16109 830 aa19.7■□□□□ 0.74
PHRF1-204ENST00000532550 CCT2P78371 535 aaKnown RBP19.7■□□□□ 0.74
PHRF1-204ENST00000532550 ZNF200P98182 395 aaPredicted RBP19.7■□□□□ 0.74
PHRF1-204ENST00000532550 AP3B2Q13367 1082 aa19.7■□□□□ 0.74
PHRF1-204ENST00000532550 TIFAQ96CG3 184 aa19.7■□□□□ 0.74
PHRF1-204ENST00000532550 VWCEQ96DN2 955 aa19.7■□□□□ 0.74
PHRF1-204ENST00000532550 PGBD1Q96JS3 809 aa19.7■□□□□ 0.74
PHRF1-204ENST00000532550 MXRA8Q9BRK3 442 aa19.7■□□□□ 0.74
PHRF1-204ENST00000532550 ANO3Q9BYT9 981 aa19.7■□□□□ 0.74
PHRF1-204ENST00000532550 TTYH1Q9H313 450 aaPredicted RBP19.7■□□□□ 0.74
PHRF1-204ENST00000532550 C6orf50Q9HD87 102 aa19.7■□□□□ 0.74
PHRF1-204ENST00000532550 PKD2L1Q9P0L9 805 aa19.7■□□□□ 0.74
PHRF1-204ENST00000532550 ZNF215Q9UL58 517 aaPredicted RBP19.7■□□□□ 0.74
PHRF1-204ENST00000532550 MYO9BQ13459 2157 aa19.69■□□□□ 0.74
PHRF1-204ENST00000532550 PARNO95453 639 aaKnown RBP19.69■□□□□ 0.74
PHRF1-204ENST00000532550 CKBP12277 381 aa19.69■□□□□ 0.74
PHRF1-204ENST00000532550 KCNA2P16389 499 aa19.69■□□□□ 0.74
PHRF1-204ENST00000532550 ZNF76P36508 570 aa19.69■□□□□ 0.74
PHRF1-204ENST00000532550 SEPT1Q8WYJ6 367 aa19.69■□□□□ 0.74
PHRF1-204ENST00000532550 DHX38Q92620 1227 aaKnown RBP19.69■□□□□ 0.74
PHRF1-204ENST00000532550 ATP6V0A1Q93050 837 aa19.69■□□□□ 0.74
PHRF1-204ENST00000532550 PHKBQ93100 1093 aa19.69■□□□□ 0.74
PHRF1-204ENST00000532550 CDX2Q99626 313 aaPredicted RBP19.69■□□□□ 0.74
PHRF1-204ENST00000532550 PBX4Q9BYU1 374 aa19.69■□□□□ 0.74
PHRF1-204ENST00000532550 RNPEPQ9H4A4 650 aa19.69■□□□□ 0.74
PHRF1-204ENST00000532550 TMEM260Q9NX78 707 aa19.69■□□□□ 0.74
PHRF1-204ENST00000532550 NID2Q14112 1375 aa19.69■□□□□ 0.74
PHRF1-204ENST00000532550 KAT6AQ92794 2004 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 SMIM10L2AP0DMW4 78 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 SMIM10L2BP0DMW5 78 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 GNAT1P11488 350 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 IFNAR1P17181 557 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 GNA11P29992 359 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 TCF7P36402 384 aaPredicted RBP19.68■□□□□ 0.74
PHRF1-204ENST00000532550 PBX2P40425 430 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 RBL2Q08999 1139 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 TOB2Q14106 344 aaPredicted RBP19.68■□□□□ 0.74
PHRF1-204ENST00000532550 RAB30Q15771 203 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 NTRK3Q16288 839 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 PKN1Q16512 942 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 CEP55Q53EZ4 464 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 JAKMIP3Q5VZ66 844 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 MCTP2Q6DN12 878 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 LRRC8DQ7L1W4 858 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 ZNF274Q96GC6 653 aaPredicted RBP19.68■□□□□ 0.74
PHRF1-204ENST00000532550 SLC26A6Q9BXS9 759 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 RNF26Q9BY78 433 aaPredicted RBP19.68■□□□□ 0.74
PHRF1-204ENST00000532550 UPF3BQ9BZI7 483 aaKnown RBP19.68■□□□□ 0.74
PHRF1-204ENST00000532550 ZMYND12Q9H0C1 365 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 ZNF576Q9H609 170 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 KCNH7Q9NS40 1196 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 PDRG1Q9NUG6 133 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 TELO2Q9Y4R8 837 aa19.68■□□□□ 0.74
PHRF1-204ENST00000532550 ESYT2A0FGR8 921 aa19.67■□□□□ 0.74
PHRF1-204ENST00000532550 PPFIA3O75145 1194 aa19.67■□□□□ 0.74
PHRF1-204ENST00000532550 CLK2P49760 499 aaKnown RBP19.67■□□□□ 0.74
PHRF1-204ENST00000532550 HIC1Q14526 733 aa19.67■□□□□ 0.74
PHRF1-204ENST00000532550 CYP2W1Q8TAV3 490 aa19.67■□□□□ 0.74
PHRF1-204ENST00000532550 NCOA5Q9HCD5 579 aaKnown RBP19.67■□□□□ 0.74
PHRF1-204ENST00000532550 TET1Q8NFU7 2136 aa19.66■□□□□ 0.74
PHRF1-204ENST00000532550 GSTTP1A0A1W2PQM5 241 aa19.66■□□□□ 0.74
PHRF1-204ENST00000532550 CPLX1O14810 134 aa19.66■□□□□ 0.74
PHRF1-204ENST00000532550 EIF5BO60841 1220 aaKnown RBP19.66■□□□□ 0.74
PHRF1-204ENST00000532550 ATP2A2P16615 1042 aaKnown RBP19.66■□□□□ 0.74
PHRF1-204ENST00000532550 SREBF1P36956 1147 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms