RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 XBP1P17861 261 aa9.1□□□□□ -0.95
TRIM49-202ENST00000532501 CCND2P30279 289 aa9.1□□□□□ -0.95
TRIM49-202ENST00000532501 TRIM29Q14134 588 aa9.1□□□□□ -0.95
TRIM49-202ENST00000532501 LAPTM4AQ15012 233 aa9.1□□□□□ -0.95
TRIM49-202ENST00000532501 STXBP2Q15833 593 aa9.1□□□□□ -0.95
TRIM49-202ENST00000532501 LETM2Q2VYF4 491 aa9.1□□□□□ -0.95
TRIM49-202ENST00000532501 FOXD4L6Q3SYB3 417 aaPredicted RBP9.1□□□□□ -0.95
TRIM49-202ENST00000532501 FOXD4L3Q6VB84 417 aaPredicted RBP9.1□□□□□ -0.95
TRIM49-202ENST00000532501 FAM177A1Q8N128 213 aaPredicted RBP9.1□□□□□ -0.95
TRIM49-202ENST00000532501 BICD2Q8TD16 824 aa9.1□□□□□ -0.95
TRIM49-202ENST00000532501 PPP1R13LQ8WUF5 828 aa9.1□□□□□ -0.95
TRIM49-202ENST00000532501 IWS1Q96ST2 819 aa9.1□□□□□ -0.95
TRIM49-202ENST00000532501 MXRA8Q9BRK3 442 aa9.1□□□□□ -0.95
TRIM49-202ENST00000532501 MAF1Q9H063 256 aa9.1□□□□□ -0.95
TRIM49-202ENST00000532501 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.1□□□□□ -0.95
TRIM49-202ENST00000532501 FOXP1Q9H334 677 aaPredicted RBP9.1□□□□□ -0.95
TRIM49-202ENST00000532501 VTA1Q9NP79 307 aa9.1□□□□□ -0.95
TRIM49-202ENST00000532501 JADE2Q9NQC1 790 aa9.1□□□□□ -0.95
TRIM49-202ENST00000532501 GNEQ9Y223 722 aaKnown RBP9.1□□□□□ -0.95
TRIM49-202ENST00000532501 PCDHB6Q9Y5E3 794 aa9.1□□□□□ -0.95
TRIM49-202ENST00000532501 MYH7BA7E2Y1 1941 aa9.1□□□□□ -0.95
TRIM49-202ENST00000532501 CCDC85CA6NKD9 419 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 SPATA31C2B4DYI2 1134 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 MSH4O15457 936 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 DHX15O43143 795 aaKnown RBP9.09□□□□□ -0.95
TRIM49-202ENST00000532501 EIF3JO75822 258 aaKnown RBP9.09□□□□□ -0.95
TRIM49-202ENST00000532501 PGK1P00558 417 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 PDCP20941 246 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 BEX3Q00994 111 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 ARHGAP1Q07960 439 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 ARHGEF6Q15052 776 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 ZNF174Q15697 407 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 CEP55Q53EZ4 464 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 PRR16Q569H4 304 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 MYSM1Q5VVJ2 828 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 NEK8Q86SG6 692 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 PLA2G4DQ86XP0 818 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 MSL3Q8N5Y2 521 aaKnown RBP9.09□□□□□ -0.95
TRIM49-202ENST00000532501 C4orf32Q8N8J7 132 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 ETNPPLQ8TBG4 499 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 HAS1Q92839 578 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 IPO9Q96P70 1041 aaKnown RBP9.09□□□□□ -0.95
TRIM49-202ENST00000532501 GLT8D2Q9H1C3 349 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 ABHD16BQ9H3Z7 469 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 AGO4Q9HCK5 861 aaKnown RBP9.09□□□□□ -0.95
TRIM49-202ENST00000532501 PAK6Q9NQU5 681 aaPredicted RBP9.09□□□□□ -0.95
TRIM49-202ENST00000532501 KCNH7Q9NS40 1196 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 SLC5A4Q9NY91 659 aa9.09□□□□□ -0.95
TRIM49-202ENST00000532501 DDX41Q9UJV9 622 aaKnown RBP9.09□□□□□ -0.95
TRIM49-202ENST00000532501 SYNRGQ9UMZ2 1314 aa9.08□□□□□ -0.96
TRIM49-202ENST00000532501 CYP3A7-CYP3A51PA0A087WV96 503 aa9.08□□□□□ -0.96
TRIM49-202ENST00000532501 LOC102724159A0A0B4J2E5 919 aa9.08□□□□□ -0.96
TRIM49-202ENST00000532501 SEPT4O43236 478 aa9.08□□□□□ -0.96
TRIM49-202ENST00000532501 ADAMTS4O75173 837 aa9.08□□□□□ -0.96
TRIM49-202ENST00000532501 CCNE2O96020 404 aa9.08□□□□□ -0.96
TRIM49-202ENST00000532501 F13A1P00488 732 aa9.08□□□□□ -0.96
TRIM49-202ENST00000532501 ZSCAN22P10073 491 aaPredicted RBP9.08□□□□□ -0.96
TRIM49-202ENST00000532501 CYP3A7P24462 503 aa9.08□□□□□ -0.96
TRIM49-202ENST00000532501 CNGA1P29973 690 aa9.08□□□□□ -0.96
TRIM49-202ENST00000532501 ICAM3P32942 547 aa9.08□□□□□ -0.96
TRIM49-202ENST00000532501 GRIN1Q05586 938 aa9.08□□□□□ -0.96
TRIM49-202ENST00000532501 PWP2Q15269 919 aaKnown RBP9.08□□□□□ -0.96
TRIM49-202ENST00000532501 PKN2Q16513 984 aaKnown RBP9.08□□□□□ -0.96
TRIM49-202ENST00000532501 IL17AQ16552 155 aa9.08□□□□□ -0.96
TRIM49-202ENST00000532501 TTC38Q5R3I4 469 aa9.08□□□□□ -0.96
TRIM49-202ENST00000532501 DEFB118Q96PH6 123 aa9.08□□□□□ -0.96
TRIM49-202ENST00000532501 USP28Q96RU2 1077 aa9.08□□□□□ -0.96
TRIM49-202ENST00000532501 KCNMB3Q9NPA1 279 aa9.08□□□□□ -0.96
TRIM49-202ENST00000532501 DDX20Q9UHI6 824 aaKnown RBP9.08□□□□□ -0.96
TRIM49-202ENST00000532501 CNPY2Q9Y2B0 182 aa9.08□□□□□ -0.96
TRIM49-202ENST00000532501 GOLGA8CPA6NN73 597 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 DDX39AO00148 427 aaKnown RBP9.07□□□□□ -0.96
TRIM49-202ENST00000532501 DYNC1LI2O43237 492 aaPredicted RBP9.07□□□□□ -0.96
TRIM49-202ENST00000532501 FIBPO43427 364 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 FARP2O94887 1054 aaPredicted RBP9.07□□□□□ -0.96
TRIM49-202ENST00000532501 GGPS1O95749 300 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 TXNP10599 105 aaKnown RBP9.07□□□□□ -0.96
TRIM49-202ENST00000532501 MCM7P33993 719 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 SP4Q02446 784 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 TNFAIP2Q03169 654 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 MTMR1Q13613 665 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 SAFBQ15424 915 aaKnown RBP eCLIP9.07□□□□□ -0.96
TRIM49-202ENST00000532501 HSDL1Q3SXM5 330 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 DUSP28Q4G0W2 176 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 XRRA1Q6P2D8 792 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 B3GNT9Q6UX72 402 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 TLK2Q86UE8 772 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 TRIM50Q86XT4 487 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 TEX2Q8IWB9 1127 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 TRMT44Q8IYL2 757 aaKnown RBP9.07□□□□□ -0.96
TRIM49-202ENST00000532501 DIS3LQ8TF46 1054 aaKnown RBP9.07□□□□□ -0.96
TRIM49-202ENST00000532501 SCFD2Q8WU76 684 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 AFG1LQ8WV93 481 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 GPRASP2Q96D09 838 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 KCNK17Q96T54 332 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 PCYT2Q99447 389 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 RNF208Q9H0X6 261 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 BRMS1Q9HCU9 246 aa9.07□□□□□ -0.96
TRIM49-202ENST00000532501 HMX1Q9NP08 348 aaPredicted RBP9.07□□□□□ -0.96
TRIM49-202ENST00000532501 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms