RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	CUL9	Q8IWT3	2517 aa		7.39	□□□□□ -1.23
PUM1-222	ENST00000531867	FAM221A	A4D161	298 aa		7.39	□□□□□ -1.23
PUM1-222	ENST00000531867	PAX4	O43316	350 aa		7.39	□□□□□ -1.23
PUM1-222	ENST00000531867	HTATSF1	O43719	755 aa	Known RBP	7.39	□□□□□ -1.23
PUM1-222	ENST00000531867	F13A1	P00488	732 aa		7.39	□□□□□ -1.23
PUM1-222	ENST00000531867	TAL1	P17542	331 aa	Predicted RBP	7.39	□□□□□ -1.23
PUM1-222	ENST00000531867	CAP1	Q01518	475 aa		7.39	□□□□□ -1.23
PUM1-222	ENST00000531867	PLCL1	Q15111	1095 aa		7.39	□□□□□ -1.23
PUM1-222	ENST00000531867	SFRP5	Q5T4F7	317 aa		7.39	□□□□□ -1.23
PUM1-222	ENST00000531867	BNC2	Q6ZN30	1099 aa	Predicted RBP	7.39	□□□□□ -1.23
PUM1-222	ENST00000531867	DDX46	Q7L014	1031 aa	Known RBP	7.39	□□□□□ -1.23
PUM1-222	ENST00000531867	HS2ST1	Q7LGA3	356 aa		7.39	□□□□□ -1.23
PUM1-222	ENST00000531867	ERMP1	Q7Z2K6	904 aa		7.39	□□□□□ -1.23
PUM1-222	ENST00000531867	SPACA3	Q8IXA5	215 aa		7.39	□□□□□ -1.23
PUM1-222	ENST00000531867	ERO1A	Q96HE7	468 aa		7.39	□□□□□ -1.23
PUM1-222	ENST00000531867	TJP2	Q9UDY2	1190 aa		7.39	□□□□□ -1.23
PUM1-222	ENST00000531867	PLAGL2	Q9UPG8	496 aa		7.39	□□□□□ -1.23
PUM1-222	ENST00000531867	CENPF	P49454	3210 aa		7.39	□□□□□ -1.23
PUM1-222	ENST00000531867		F6X3S4	739 aa		7.38	□□□□□ -1.23
PUM1-222	ENST00000531867	ZNF865	P0CJ78	1059 aa	Predicted RBP	7.38	□□□□□ -1.23
PUM1-222	ENST00000531867	FUT4	P22083	530 aa		7.38	□□□□□ -1.23
PUM1-222	ENST00000531867	ETV3	P41162	512 aa		7.38	□□□□□ -1.23
PUM1-222	ENST00000531867	MPP2	Q14168	576 aa		7.38	□□□□□ -1.23
PUM1-222	ENST00000531867	TAF7	Q15545	349 aa	Predicted RBP	7.38	□□□□□ -1.23
PUM1-222	ENST00000531867	ZNF574	Q6ZN55	896 aa	Predicted RBP	7.38	□□□□□ -1.23
PUM1-222	ENST00000531867	CBLL1	Q75N03	491 aa		7.38	□□□□□ -1.23
PUM1-222	ENST00000531867	MCM10	Q7L590	875 aa		7.38	□□□□□ -1.23
PUM1-222	ENST00000531867	SPRED2	Q7Z698	418 aa		7.38	□□□□□ -1.23
PUM1-222	ENST00000531867	WFDC3	Q8IUB2	231 aa		7.38	□□□□□ -1.23
PUM1-222	ENST00000531867	MCAT	Q8IVS2	390 aa	Known RBP	7.38	□□□□□ -1.23
PUM1-222	ENST00000531867	MFSD4A	Q8N468	514 aa		7.38	□□□□□ -1.23
PUM1-222	ENST00000531867	NGEF	Q8N5V2	710 aa		7.38	□□□□□ -1.23
PUM1-222	ENST00000531867	KBTBD4	Q9NVX7	518 aa		7.38	□□□□□ -1.23
PUM1-222	ENST00000531867	ZNF646	O15015	1829 aa	Predicted RBP	7.38	□□□□□ -1.23
PUM1-222	ENST00000531867	COL6A3	P12111	3177 aa		7.37	□□□□□ -1.23
PUM1-222	ENST00000531867		A0A1W2PPC1	479 aa		7.37	□□□□□ -1.23
PUM1-222	ENST00000531867	MANSC4	A6NHS7	340 aa	Predicted RBP	7.37	□□□□□ -1.23
PUM1-222	ENST00000531867	RECK	O95980	971 aa		7.37	□□□□□ -1.23
PUM1-222	ENST00000531867	CD8B	P10966	210 aa		7.37	□□□□□ -1.23
PUM1-222	ENST00000531867	PLCG1	P19174	1290 aa		7.37	□□□□□ -1.23
PUM1-222	ENST00000531867	KIR3DL1	P43629	444 aa		7.37	□□□□□ -1.23
PUM1-222	ENST00000531867	YARS	P54577	528 aa	Known RBP	7.37	□□□□□ -1.23
PUM1-222	ENST00000531867	GPSM2	P81274	684 aa		7.37	□□□□□ -1.23
PUM1-222	ENST00000531867	BNIP3	Q12983	259 aa		7.37	□□□□□ -1.23
PUM1-222	ENST00000531867	SF3B3	Q15393	1217 aa	Known RBP	7.37	□□□□□ -1.23
PUM1-222	ENST00000531867	TMEM201	Q5SNT2	666 aa		7.37	□□□□□ -1.23
PUM1-222	ENST00000531867	NLRP10	Q86W26	655 aa		7.37	□□□□□ -1.23
PUM1-222	ENST00000531867	GOLM1	Q8NBJ4	401 aa		7.37	□□□□□ -1.23
PUM1-222	ENST00000531867	TBC1D16	Q8TBP0	767 aa		7.37	□□□□□ -1.23
PUM1-222	ENST00000531867	ACSF2	Q96CM8	615 aa	Predicted RBP	7.37	□□□□□ -1.23
PUM1-222	ENST00000531867	EYA3	Q99504	573 aa		7.37	□□□□□ -1.23
PUM1-222	ENST00000531867	MYOZ2	Q9NPC6	264 aa		7.37	□□□□□ -1.23
PUM1-222	ENST00000531867	RRP7A	Q9Y3A4	280 aa	Known RBP	7.37	□□□□□ -1.23
PUM1-222	ENST00000531867	COL4A1	P02462	1669 aa		7.37	□□□□□ -1.23
PUM1-222	ENST00000531867	MINDY4B	A8MYZ0	360 aa		7.36	□□□□□ -1.23
PUM1-222	ENST00000531867	U2SURP	O15042	1029 aa	Known RBP	7.36	□□□□□ -1.23
PUM1-222	ENST00000531867	ZBTB48	P10074	688 aa	Predicted RBP	7.36	□□□□□ -1.23
PUM1-222	ENST00000531867	ERCC5	P28715	1186 aa	Predicted RBP	7.36	□□□□□ -1.23
PUM1-222	ENST00000531867	PRKAR2B	P31323	418 aa		7.36	□□□□□ -1.23
PUM1-222	ENST00000531867	EIF4A1	P60842	406 aa	Known RBP	7.36	□□□□□ -1.23
PUM1-222	ENST00000531867	FAM160A1	Q05DH4	1040 aa		7.36	□□□□□ -1.23
PUM1-222	ENST00000531867	TCIRG1	Q13488	830 aa		7.36	□□□□□ -1.23
PUM1-222	ENST00000531867	NKPD1	Q17RQ9	610 aa		7.36	□□□□□ -1.23
PUM1-222	ENST00000531867	PRAMEF18	Q5VWM3	479 aa		7.36	□□□□□ -1.23
PUM1-222	ENST00000531867	UBE2Q1	Q7Z7E8	422 aa		7.36	□□□□□ -1.23
PUM1-222	ENST00000531867	DHX37	Q8IY37	1157 aa	Known RBP	7.36	□□□□□ -1.23
PUM1-222	ENST00000531867	CD99L2	Q8TCZ2	262 aa		7.36	□□□□□ -1.23
PUM1-222	ENST00000531867	XAGE3	Q8WTP9	111 aa		7.36	□□□□□ -1.23
PUM1-222	ENST00000531867	RTF1	Q92541	710 aa	Known RBP	7.36	□□□□□ -1.23
PUM1-222	ENST00000531867	CELF1	Q92879	486 aa	Known RBP	7.36	□□□□□ -1.23
PUM1-222	ENST00000531867	SUPT16H	Q9Y5B9	1047 aa	Known RBP	7.36	□□□□□ -1.23
PUM1-222	ENST00000531867	SH3TC1	Q8TE82	1336 aa		7.35	□□□□□ -1.23
PUM1-222	ENST00000531867	MYL6B	P14649	208 aa		7.35	□□□□□ -1.23
PUM1-222	ENST00000531867	JUNB	P17275	347 aa	Predicted RBP	7.35	□□□□□ -1.23
PUM1-222	ENST00000531867	SP3	Q02447	781 aa		7.35	□□□□□ -1.23
PUM1-222	ENST00000531867	DCTN1	Q14203	1278 aa		7.35	□□□□□ -1.23
PUM1-222	ENST00000531867	NBPF9	Q3BBW0	867 aa		7.35	□□□□□ -1.23
PUM1-222	ENST00000531867	ARMC9	Q7Z3E5	817 aa		7.35	□□□□□ -1.23
PUM1-222	ENST00000531867	REC114	Q7Z4M0	266 aa		7.35	□□□□□ -1.23
PUM1-222	ENST00000531867	FAM13C	Q8NE31	585 aa		7.35	□□□□□ -1.23
PUM1-222	ENST00000531867	PNISR	Q8TF01	805 aa	Known RBP	7.35	□□□□□ -1.23
PUM1-222	ENST00000531867	CYB5D2	Q8WUJ1	264 aa		7.35	□□□□□ -1.23
PUM1-222	ENST00000531867	DPH2	Q9BQC3	489 aa	Predicted RBP	7.35	□□□□□ -1.23
PUM1-222	ENST00000531867	LRRC3	Q9BY71	257 aa		7.35	□□□□□ -1.23
PUM1-222	ENST00000531867	MIS18A	Q9NYP9	233 aa		7.35	□□□□□ -1.23
PUM1-222	ENST00000531867	GGT7	Q9UJ14	662 aa		7.35	□□□□□ -1.23
PUM1-222	ENST00000531867	SCAF8	Q9UPN6	1271 aa	Known RBP	7.35	□□□□□ -1.23
PUM1-222	ENST00000531867	RANBP2	P49792	3224 aa	Known RBP	7.35	□□□□□ -1.23
PUM1-222	ENST00000531867	BIN1	O00499	593 aa		7.34	□□□□□ -1.23
PUM1-222	ENST00000531867	WNT10B	O00744	389 aa		7.34	□□□□□ -1.23
PUM1-222	ENST00000531867	GART	P22102	1010 aa		7.34	□□□□□ -1.23
PUM1-222	ENST00000531867	NF2	P35240	595 aa		7.34	□□□□□ -1.23
PUM1-222	ENST00000531867	EIF4A3	P38919	411 aa	Known RBP	7.34	□□□□□ -1.23
PUM1-222	ENST00000531867	MMP14	P50281	582 aa		7.34	□□□□□ -1.23
PUM1-222	ENST00000531867	CRHR2	Q13324	411 aa		7.34	□□□□□ -1.23
PUM1-222	ENST00000531867	IKZF1	Q13422	519 aa		7.34	□□□□□ -1.23
PUM1-222	ENST00000531867	CWF19L2	Q2TBE0	894 aa	Known RBP	7.34	□□□□□ -1.23
PUM1-222	ENST00000531867	ZNF792	Q3KQV3	632 aa		7.34	□□□□□ -1.23
PUM1-222	ENST00000531867	HSP90AB3P	Q58FF7	597 aa		7.34	□□□□□ -1.23
PUM1-222	ENST00000531867	PI4K2B	Q8TCG2	481 aa		7.34	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms