RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 SMIM10L2BP0DMW5 78 aa10.48□□□□□ -0.73
USF1-210ENST00000531842 HSPD1P10809 573 aaKnown RBP10.48□□□□□ -0.73
USF1-210ENST00000531842 UBA1P22314 1058 aaKnown RBP10.48□□□□□ -0.73
USF1-210ENST00000531842 DNAJB1P25685 340 aa10.48□□□□□ -0.73
USF1-210ENST00000531842 RBM10P98175 930 aaKnown RBP10.48□□□□□ -0.73
USF1-210ENST00000531842 COL19A1Q14993 1142 aa10.48□□□□□ -0.73
USF1-210ENST00000531842 PTPROQ16827 1216 aa10.48□□□□□ -0.73
USF1-210ENST00000531842 CELF3Q5SZQ8 465 aaKnown RBP10.48□□□□□ -0.73
USF1-210ENST00000531842 ADGRD2Q7Z7M1 963 aa10.48□□□□□ -0.73
USF1-210ENST00000531842 STAG2Q8N3U4 1231 aa10.48□□□□□ -0.73
USF1-210ENST00000531842 ZBTB10Q96DT7 871 aa10.48□□□□□ -0.73
USF1-210ENST00000531842 RNPEPQ9H4A4 650 aa10.48□□□□□ -0.73
USF1-210ENST00000531842 JMJD4Q9H9V9 463 aa10.48□□□□□ -0.73
USF1-210ENST00000531842 SETD4Q9NVD3 440 aa10.48□□□□□ -0.73
USF1-210ENST00000531842 ABCB11O95342 1321 aa10.48□□□□□ -0.73
USF1-210ENST00000531842 VPS13AQ96RL7 3174 aa10.48□□□□□ -0.73
USF1-210ENST00000531842 EFCAB14O75071 495 aa10.47□□□□□ -0.73
USF1-210ENST00000531842 HOXD8P13378 290 aaPredicted RBP10.47□□□□□ -0.73
USF1-210ENST00000531842 SP4Q02446 784 aa10.47□□□□□ -0.73
USF1-210ENST00000531842 TCF15Q12870 199 aa10.47□□□□□ -0.73
USF1-210ENST00000531842 LAMC2Q13753 1193 aa10.47□□□□□ -0.73
USF1-210ENST00000531842 CAMK1Q14012 370 aa10.47□□□□□ -0.73
USF1-210ENST00000531842 ALX1Q15699 326 aa10.47□□□□□ -0.73
USF1-210ENST00000531842 SMAD2Q15796 467 aaKnown RBP10.47□□□□□ -0.73
USF1-210ENST00000531842 SLC35G1Q2M3R5 365 aa10.47□□□□□ -0.73
USF1-210ENST00000531842 CTC1Q2NKJ3 1217 aa10.47□□□□□ -0.73
USF1-210ENST00000531842 RUFY4Q6ZNE9 571 aa10.47□□□□□ -0.73
USF1-210ENST00000531842 PNMA1Q8ND90 353 aa10.47□□□□□ -0.73
USF1-210ENST00000531842 RGS22Q8NE09 1264 aa10.47□□□□□ -0.73
USF1-210ENST00000531842 SEPT8Q92599 483 aa10.47□□□□□ -0.73
USF1-210ENST00000531842 EMID1Q96A84 441 aaPredicted RBP10.47□□□□□ -0.73
USF1-210ENST00000531842 PDCD2LQ9BRP1 358 aa10.47□□□□□ -0.73
USF1-210ENST00000531842 KATNAL1Q9BW62 490 aa10.47□□□□□ -0.73
USF1-210ENST00000531842 PTPRZ1P23471 2315 aaPredicted RBP10.46□□□□□ -0.73
USF1-210ENST00000531842 B4DLN1 442 aa10.46□□□□□ -0.73
USF1-210ENST00000531842 B4E1Z4 1266 aa10.46□□□□□ -0.73
USF1-210ENST00000531842 STXBP3O00186 592 aa10.46□□□□□ -0.73
USF1-210ENST00000531842 KDM4AO75164 1064 aa10.46□□□□□ -0.73
USF1-210ENST00000531842 EIF3JO75822 258 aaKnown RBP10.46□□□□□ -0.73
USF1-210ENST00000531842 PARNO95453 639 aaKnown RBP10.46□□□□□ -0.73
USF1-210ENST00000531842 LGALS2P05162 132 aa10.46□□□□□ -0.73
USF1-210ENST00000531842 GHRP10912 638 aa10.46□□□□□ -0.73
USF1-210ENST00000531842 IBSPP21815 317 aaPredicted RBP10.46□□□□□ -0.73
USF1-210ENST00000531842 GATMP50440 423 aa10.46□□□□□ -0.73
USF1-210ENST00000531842 MRPL12P52815 198 aaKnown RBP10.46□□□□□ -0.73
USF1-210ENST00000531842 VCPP55072 806 aaKnown RBP10.46□□□□□ -0.73
USF1-210ENST00000531842 PUS10Q3MIT2 529 aaKnown RBP10.46□□□□□ -0.73
USF1-210ENST00000531842 MFSD6Q6ZSS7 791 aa10.46□□□□□ -0.73
USF1-210ENST00000531842 IWS1Q96ST2 819 aa10.46□□□□□ -0.73
USF1-210ENST00000531842 CTNNA3Q9UI47 895 aa10.46□□□□□ -0.73
USF1-210ENST00000531842 EMSYQ7Z589 1322 aa10.46□□□□□ -0.73
USF1-210ENST00000531842 RIF1Q5UIP0 2472 aaKnown RBP10.46□□□□□ -0.74
USF1-210ENST00000531842 TMEM221A6NGB7 291 aa10.45□□□□□ -0.74
USF1-210ENST00000531842 H3BRB1 525 aa10.45□□□□□ -0.74
USF1-210ENST00000531842 M0R296 226 aa10.45□□□□□ -0.74
USF1-210ENST00000531842 PDGFBP01127 241 aaPredicted RBP10.45□□□□□ -0.74
USF1-210ENST00000531842 CHRNA1P02708 482 aa10.45□□□□□ -0.74
USF1-210ENST00000531842 HOXC8P31273 242 aa10.45□□□□□ -0.74
USF1-210ENST00000531842 BMPR1AP36894 532 aa10.45□□□□□ -0.74
USF1-210ENST00000531842 HSD17B4P51659 736 aa10.45□□□□□ -0.74
USF1-210ENST00000531842 SEMA3FQ13275 785 aa10.45□□□□□ -0.74
USF1-210ENST00000531842 PGM5Q15124 567 aa10.45□□□□□ -0.74
USF1-210ENST00000531842 MCMDC2Q4G0Z9 681 aa10.45□□□□□ -0.74
USF1-210ENST00000531842 HERC4Q5GLZ8 1057 aaPredicted RBP10.45□□□□□ -0.74
USF1-210ENST00000531842 GPATCH4Q5T3I0 446 aaKnown RBP10.45□□□□□ -0.74
USF1-210ENST00000531842 UTP14CQ5TAP6 766 aaKnown RBP10.45□□□□□ -0.74
USF1-210ENST00000531842 RBM23Q86U06 439 aaKnown RBP10.45□□□□□ -0.74
USF1-210ENST00000531842 FCHSD1Q86WN1 690 aa10.45□□□□□ -0.74
USF1-210ENST00000531842 FIBCD1Q8N539 461 aa10.45□□□□□ -0.74
USF1-210ENST00000531842 LINC01599Q8WXQ3 324 aa10.45□□□□□ -0.74
USF1-210ENST00000531842 PBXIP1Q96AQ6 731 aa10.45□□□□□ -0.74
USF1-210ENST00000531842 IL17RAQ96F46 866 aa10.45□□□□□ -0.74
USF1-210ENST00000531842 YTHDC1Q96MU7 727 aaKnown RBP10.45□□□□□ -0.74
USF1-210ENST00000531842 TTC14Q96N46 770 aa10.45□□□□□ -0.74
USF1-210ENST00000531842 SAMD11Q96NU1 681 aa10.45□□□□□ -0.74
USF1-210ENST00000531842 TUT1Q9H6E5 874 aaKnown RBP10.45□□□□□ -0.74
USF1-210ENST00000531842 HELLSQ9NRZ9 838 aa10.45□□□□□ -0.74
USF1-210ENST00000531842 CLEC1BQ9P126 229 aa10.45□□□□□ -0.74
USF1-210ENST00000531842 PRKAG3Q9UGI9 489 aa10.45□□□□□ -0.74
USF1-210ENST00000531842 BARX2Q9UMQ3 279 aaPredicted RBP10.45□□□□□ -0.74
USF1-210ENST00000531842 FNDC1Q4ZHG4 1894 aaPredicted RBP10.44□□□□□ -0.74
USF1-210ENST00000531842 DCHS1Q96JQ0 3298 aa10.44□□□□□ -0.74
USF1-210ENST00000531842 CCDC171Q6TFL3 1326 aa10.44□□□□□ -0.74
USF1-210ENST00000531842 ADGRA3Q8IWK6 1321 aa10.44□□□□□ -0.74
USF1-210ENST00000531842 PPFIA4O75335 1185 aa10.44□□□□□ -0.74
USF1-210ENST00000531842 SP100P23497 879 aaPredicted RBP10.44□□□□□ -0.74
USF1-210ENST00000531842 ARHGAP4P98171 946 aa10.44□□□□□ -0.74
USF1-210ENST00000531842 PAN2Q504Q3 1202 aaKnown RBP10.44□□□□□ -0.74
USF1-210ENST00000531842 ANKRD45Q5TZF3 282 aa10.44□□□□□ -0.74
USF1-210ENST00000531842 TRIM67Q6ZTA4 783 aa10.44□□□□□ -0.74
USF1-210ENST00000531842 CYFIP1Q7L576 1253 aa10.44□□□□□ -0.74
USF1-210ENST00000531842 HOMER1Q86YM7 354 aa10.44□□□□□ -0.74
USF1-210ENST00000531842 MCF2L2Q86YR7 1114 aa10.44□□□□□ -0.74
USF1-210ENST00000531842 ENAHQ8N8S7 591 aaPredicted RBP10.44□□□□□ -0.74
USF1-210ENST00000531842 LMBR1Q8WVP7 490 aa10.44□□□□□ -0.74
USF1-210ENST00000531842 PIBF1Q8WXW3 757 aa10.44□□□□□ -0.74
USF1-210ENST00000531842 EDAQ92838 391 aa10.44□□□□□ -0.74
USF1-210ENST00000531842 MSLNLQ96KJ4 702 aa10.44□□□□□ -0.74
USF1-210ENST00000531842 MFSD14AQ96MC6 490 aa10.44□□□□□ -0.74
USF1-210ENST00000531842 KAT14Q9H8E8 782 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms