RNA–Protein interactions for RNA: ENST00000531582.1

ECHDC1-221, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 4

Gene ECHDC1, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-221ENST00000531582 PTPRCP08575 1304 aa5.4□□□□□ -1.55
ECHDC1-221ENST00000531582 CCDC171Q6TFL3 1326 aa5.4□□□□□ -1.55
ECHDC1-221ENST00000531582 KDM2BQ8NHM5 1336 aa5.4□□□□□ -1.55
ECHDC1-221ENST00000531582 CCNB3Q8WWL7 1395 aa5.4□□□□□ -1.55
ECHDC1-221ENST00000531582 PLEKHH1Q9ULM0 1364 aa5.4□□□□□ -1.55
ECHDC1-221ENST00000531582 NLRP1Q9C000 1473 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 hCG_2014768A0A024R1R8 64 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 TARSL2A2RTX5 802 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 TBCAO75347 108 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 ERLIN2O94905 339 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 TUBB4AP04350 444 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 PYGLP06737 847 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 NFICP08651 508 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 DESP17661 470 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 PLCG1P19174 1290 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 PSMA3P25788 255 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 HNRNPH1P31943 449 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 GRK4P32298 578 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 S100A5P33763 92 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 PIK3CAP42336 1068 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 FNTAP49354 379 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 PAPOLAP51003 745 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 YARSP54577 528 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 ARPC4P59998 168 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 CTAG1AP78358 180 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 MAPRE1Q15691 268 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 USH1GQ495M9 461 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 SEZ6Q53EL9 994 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 AKNAD1Q5T1N1 836 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 ANKRD45Q5TZF3 282 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 AGAP9Q5VTM2 703 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 RNF43Q68DV7 783 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 CWF19L1Q69YN2 538 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 NAA16Q6N069 864 aaPredicted RBP5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 TMEM110Q86TL2 294 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 MCATQ8IVS2 390 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 CCDC146Q8IYE0 955 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 CLASRPQ8N2M8 674 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 OR8K1Q8NGG5 319 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 ACMSDQ8TDX5 336 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 SH3TC2Q8TF17 1288 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 PPP2R3CQ969Q6 453 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 SLC35B4Q969S0 331 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 ISL2Q96A47 359 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 RUNDC1Q96C34 613 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 ERO1AQ96HE7 468 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 MAML3Q96JK9 1138 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 CCDC114Q96M63 670 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 ALS2CR12Q96Q35 445 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 CAPS2Q9BXY5 557 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 TRIM4Q9C037 500 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 TAOK3Q9H2K8 898 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 MRPL46Q9H2W6 279 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 ACBD3Q9H3P7 528 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 ZNF304Q9HCX3 659 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 XPO7Q9UIA9 1087 aaKnown RBP5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 CFAP45Q9UL16 551 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 DAGLAQ9Y4D2 1042 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 ELP1O95163 1332 aa5.39□□□□□ -1.55
ECHDC1-221ENST00000531582 WDR97A6NE52 1622 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 GOLGA6L4A6NEF3 574 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 TMEM221A6NGB7 291 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 TLR3O15455 904 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 SGTAO43765 313 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 LRIG2O94898 1065 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 MYCLP1P12525 358 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 FERP16591 822 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 DDIT3P35638 169 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 CCT6AP40227 531 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 TUBA1BP68363 451 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 PHEXP78562 749 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 NUCB1Q02818 461 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 POU5F1BQ06416 359 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 SCRN1Q12765 414 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 DYNC1I2Q13409 638 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 DDB1Q16531 1140 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 GNPTABQ3T906 1256 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 CYP27C1Q4G0S4 372 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 Q4G0T1 1027 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 NKAPLQ5M9Q1 402 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 SH2D4BQ5SQS7 431 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 EMC10Q5UCC4 262 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 ZNF746Q6NUN9 644 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 SLC30A9Q6PML9 568 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 MTHFD1LQ6UB35 978 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 LRRC31Q6UY01 552 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 TUBA1AQ71U36 451 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 MRPL41Q8IXM3 137 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 TTC39CQ8N584 583 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 SVIPQ8NHG7 77 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 TRPC4APQ8TEL6 797 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 CUL5Q93034 780 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 RBM41Q96IZ5 413 aaKnown RBP5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 CABS1Q96KC9 395 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 NEUROD6Q96NK8 337 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 RPS6KC1Q96S38 1066 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 SIN3AQ96ST3 1273 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 DBNDD2Q9BQY9 259 aa5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 METTL22Q9BUU2 404 aaPredicted RBP5.38□□□□□ -1.55
ECHDC1-221ENST00000531582 CCDC68Q9H2F9 335 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms