RNA–Protein interactions for RNA: ENST00000531523.1

SNHG9-201, Transcript of small nucleolar RNA host gene 9, humanhuman

TSL 1 (best) BASIC

Gene SNHG9, Length 275 nt, Biotype lincRNA, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG9-201ENST00000531523 EXOSC10Q01780 885 aaKnown RBP17.19■□□□□ 0.34
SNHG9-201ENST00000531523 TAP1Q03518 808 aa17.19■□□□□ 0.34
SNHG9-201ENST00000531523 FUT2Q10981 343 aa17.19■□□□□ 0.34
SNHG9-201ENST00000531523 GNPTABQ3T906 1256 aa17.19■□□□□ 0.34
SNHG9-201ENST00000531523 CNKSR3Q6P9H4 555 aa17.19■□□□□ 0.34
SNHG9-201ENST00000531523 NFXL1Q6ZNB6 911 aa17.19■□□□□ 0.34
SNHG9-201ENST00000531523 CYFIP1Q7L576 1253 aa17.19■□□□□ 0.34
SNHG9-201ENST00000531523 TMCO2Q7Z6W1 182 aaPredicted RBP17.19■□□□□ 0.34
SNHG9-201ENST00000531523 TRIM50Q86XT4 487 aa17.19■□□□□ 0.34
SNHG9-201ENST00000531523 MLXIPQ9HAP2 919 aa17.19■□□□□ 0.34
SNHG9-201ENST00000531523 SEC63Q9UGP8 760 aaKnown RBP17.19■□□□□ 0.34
SNHG9-201ENST00000531523 XIRP2A4UGR9 3374 aa17.19■□□□□ 0.34
SNHG9-201ENST00000531523 H3BRB1 525 aa17.18■□□□□ 0.34
SNHG9-201ENST00000531523 PARNO95453 639 aaKnown RBP17.18■□□□□ 0.34
SNHG9-201ENST00000531523 SMIM10L2AP0DMW4 78 aa17.18■□□□□ 0.34
SNHG9-201ENST00000531523 SMIM10L2BP0DMW5 78 aa17.18■□□□□ 0.34
SNHG9-201ENST00000531523 CALM1P0DP23 149 aa17.18■□□□□ 0.34
SNHG9-201ENST00000531523 CALM2P0DP24 149 aa17.18■□□□□ 0.34
SNHG9-201ENST00000531523 CALM3P0DP25 149 aa17.18■□□□□ 0.34
SNHG9-201ENST00000531523 UBE2SQ16763 222 aa17.18■□□□□ 0.34
SNHG9-201ENST00000531523 ADCK5Q3MIX3 580 aa17.18■□□□□ 0.34
SNHG9-201ENST00000531523 TYW1BQ6NUM6 668 aa17.18■□□□□ 0.34
SNHG9-201ENST00000531523 APOA5Q6Q788 366 aa17.18■□□□□ 0.34
SNHG9-201ENST00000531523 MICU3Q86XE3 530 aa17.18■□□□□ 0.34
SNHG9-201ENST00000531523 RASEFQ8IZ41 740 aa17.18■□□□□ 0.34
SNHG9-201ENST00000531523 FANCBQ8NB91 859 aa17.18■□□□□ 0.34
SNHG9-201ENST00000531523 SMARCC2Q8TAQ2 1214 aa17.18■□□□□ 0.34
SNHG9-201ENST00000531523 OSBPL7Q9BZF2 842 aa17.18■□□□□ 0.34
SNHG9-201ENST00000531523 TUT1Q9H6E5 874 aaKnown RBP17.18■□□□□ 0.34
SNHG9-201ENST00000531523 LCHNA4D1U4 455 aa17.17■□□□□ 0.34
SNHG9-201ENST00000531523 RFXAPO00287 272 aa17.17■□□□□ 0.34
SNHG9-201ENST00000531523 KCNA2P16389 499 aa17.17■□□□□ 0.34
SNHG9-201ENST00000531523 ITGB5P18084 799 aa17.17■□□□□ 0.34
SNHG9-201ENST00000531523 IGFBP4P22692 258 aa17.17■□□□□ 0.34
SNHG9-201ENST00000531523 ADAM17P78536 824 aa17.17■□□□□ 0.34
SNHG9-201ENST00000531523 NEDD9Q14511 834 aa17.17■□□□□ 0.34
SNHG9-201ENST00000531523 TSGA10IPQ3SY00 556 aa17.17■□□□□ 0.34
SNHG9-201ENST00000531523 XRRA1Q6P2D8 792 aa17.17■□□□□ 0.34
SNHG9-201ENST00000531523 PPM1EQ8WY54 764 aa17.17■□□□□ 0.34
SNHG9-201ENST00000531523 TCEANC2Q96MN5 208 aa17.17■□□□□ 0.34
SNHG9-201ENST00000531523 SENP7Q9BQF6 1050 aa17.17■□□□□ 0.34
SNHG9-201ENST00000531523 BRPF3Q9ULD4 1205 aa17.17■□□□□ 0.34
SNHG9-201ENST00000531523 SLC12A7Q9Y666 1083 aa17.17■□□□□ 0.34
SNHG9-201ENST00000531523 C17orf102A2RUQ5 167 aa17.16■□□□□ 0.34
SNHG9-201ENST00000531523 TREHO43280 583 aa17.16■□□□□ 0.34
SNHG9-201ENST00000531523 ATP9AO75110 1047 aa17.16■□□□□ 0.34
SNHG9-201ENST00000531523 POU3F3P20264 500 aaPredicted RBP17.16■□□□□ 0.34
SNHG9-201ENST00000531523 CCDC82Q8N4S0 544 aa17.16■□□□□ 0.34
SNHG9-201ENST00000531523 CUL5Q93034 780 aa17.16■□□□□ 0.34
SNHG9-201ENST00000531523 RNPEPQ9H4A4 650 aa17.16■□□□□ 0.34
SNHG9-201ENST00000531523 PSTPIP2Q9H939 334 aa17.16■□□□□ 0.34
SNHG9-201ENST00000531523 CERS4Q9HA82 394 aa17.16■□□□□ 0.34
SNHG9-201ENST00000531523 UBIAD1Q9Y5Z9 338 aa17.16■□□□□ 0.34
SNHG9-201ENST00000531523 COL4A6Q14031 1691 aa17.16■□□□□ 0.34
SNHG9-201ENST00000531523 KAT6AQ92794 2004 aa17.15■□□□□ 0.34
SNHG9-201ENST00000531523 ABHD14A-ACY1A0A1B0GW23 586 aa17.15■□□□□ 0.34
SNHG9-201ENST00000531523 LPXNO60711 386 aa17.15■□□□□ 0.34
SNHG9-201ENST00000531523 CCDC85BQ15834 202 aaPredicted RBP17.15■□□□□ 0.34
SNHG9-201ENST00000531523 TJAP1Q5JTD0 557 aa17.15■□□□□ 0.34
SNHG9-201ENST00000531523 WWC2Q6AWC2 1192 aa17.15■□□□□ 0.34
SNHG9-201ENST00000531523 ATP6V0A1Q93050 837 aa17.15■□□□□ 0.34
SNHG9-201ENST00000531523 GPRASP2Q96D09 838 aa17.15■□□□□ 0.34
SNHG9-201ENST00000531523 NEK1Q96PY6 1258 aa17.15■□□□□ 0.34
SNHG9-201ENST00000531523 USP26Q9BXU7 913 aa17.15■□□□□ 0.34
SNHG9-201ENST00000531523 FAM217BQ9NTX9 383 aaPredicted RBP17.15■□□□□ 0.34
SNHG9-201ENST00000531523 MTCH2Q9Y6C9 303 aa17.15■□□□□ 0.34
SNHG9-201ENST00000531523 ATG2AQ2TAZ0 1938 aa17.15■□□□□ 0.34
SNHG9-201ENST00000531523 NLRC5Q86WI3 1866 aa17.14■□□□□ 0.33
SNHG9-201ENST00000531523 NOP56O00567 594 aaKnown RBP17.14■□□□□ 0.33
SNHG9-201ENST00000531523 TLL1O43897 1013 aa17.14■□□□□ 0.33
SNHG9-201ENST00000531523 LGR5O75473 907 aa17.14■□□□□ 0.33
SNHG9-201ENST00000531523 KCNJ6P48051 423 aa17.14■□□□□ 0.33
SNHG9-201ENST00000531523 PLEKHG4Q58EX7 1191 aa17.14■□□□□ 0.33
SNHG9-201ENST00000531523 KRT40Q6A162 431 aa17.14■□□□□ 0.33
SNHG9-201ENST00000531523 KCNB2Q92953 911 aa17.14■□□□□ 0.33
SNHG9-201ENST00000531523 SETD4Q9NVD3 440 aa17.14■□□□□ 0.33
SNHG9-201ENST00000531523 THEGQ9P2T0 379 aa17.14■□□□□ 0.33
SNHG9-201ENST00000531523 PRRC2BQ5JSZ5 2229 aaKnown RBP17.14■□□□□ 0.33
SNHG9-201ENST00000531523 CUL9Q8IWT3 2517 aa17.14■□□□□ 0.33
SNHG9-201ENST00000531523 CDC45O75419 566 aa17.13■□□□□ 0.33
SNHG9-201ENST00000531523 GJB5O95377 273 aa17.13■□□□□ 0.33
SNHG9-201ENST00000531523 THPOP40225 353 aa17.13■□□□□ 0.33
SNHG9-201ENST00000531523 SP4Q02446 784 aa17.13■□□□□ 0.33
SNHG9-201ENST00000531523 RNF20Q5VTR2 975 aa17.13■□□□□ 0.33
SNHG9-201ENST00000531523 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.13■□□□□ 0.33
SNHG9-201ENST00000531523 DHX32Q7L7V1 743 aaKnown RBP17.13■□□□□ 0.33
SNHG9-201ENST00000531523 HEATR3Q7Z4Q2 680 aa17.13■□□□□ 0.33
SNHG9-201ENST00000531523 NLRX1Q86UT6 975 aa17.13■□□□□ 0.33
SNHG9-201ENST00000531523 DBF4BQ8NFT6 615 aa17.13■□□□□ 0.33
SNHG9-201ENST00000531523 LMBR1Q8WVP7 490 aa17.13■□□□□ 0.33
SNHG9-201ENST00000531523 ATXN2LQ8WWM7 1075 aaKnown RBP17.13■□□□□ 0.33
SNHG9-201ENST00000531523 PCDHA6Q9UN73 950 aa17.13■□□□□ 0.33
SNHG9-201ENST00000531523 PCDHA8Q9Y5H6 950 aa17.13■□□□□ 0.33
SNHG9-201ENST00000531523 GSTTP1A0A1W2PQM5 241 aa17.12■□□□□ 0.33
SNHG9-201ENST00000531523 RSPH10B2B2RC85 870 aa17.12■□□□□ 0.33
SNHG9-201ENST00000531523 STXBP3O00186 592 aa17.12■□□□□ 0.33
SNHG9-201ENST00000531523 CAND2O75155 1236 aa17.12■□□□□ 0.33
SNHG9-201ENST00000531523 RSPH10BP0C881 870 aa17.12■□□□□ 0.33
SNHG9-201ENST00000531523 CDC27P30260 824 aa17.12■□□□□ 0.33
SNHG9-201ENST00000531523 UTP14CQ5TAP6 766 aaKnown RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms