RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 EMSYQ7Z589 1322 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 NOP56O00567 594 aaKnown RBP14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 FIBPO43427 364 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 DDAH1O94760 285 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 LGALS2P05162 132 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 SMIM10L2AP0DMW4 78 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 SMIM10L2BP0DMW5 78 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 SMARCA1P28370 1054 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 KIF5BP33176 963 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 NEDD9Q14511 834 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 FAM117BQ6P1L5 589 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 USP17L6PQ6QN14 398 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 METTL7BQ6UX53 244 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 CYFIP1Q7L576 1253 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 DBF4BQ8NFT6 615 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 CTCFLQ8NI51 663 aaPredicted RBP14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 ATP6V0A1Q93050 837 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 GPR20Q99678 358 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 LZTS2Q9BRK4 669 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 MYL10Q9BUA6 226 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 USP26Q9BXU7 913 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 RNPEPQ9H4A4 650 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 RTEL1Q9NZ71 1219 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 COG5Q9UP83 839 aa14.78□□□□□ -0.04
TM9SF1-211ENST00000531406 LINC01553A4QN01 128 aa14.77□□□□□ -0.05
TM9SF1-211ENST00000531406 PIK3CDO00329 1044 aa14.77□□□□□ -0.05
TM9SF1-211ENST00000531406 TREHO43280 583 aa14.77□□□□□ -0.05
TM9SF1-211ENST00000531406 PRC1O43663 620 aa14.77□□□□□ -0.05
TM9SF1-211ENST00000531406 KCNQ1P51787 676 aa14.77□□□□□ -0.05
TM9SF1-211ENST00000531406 ERVK-21P61565 698 aa14.77□□□□□ -0.05
TM9SF1-211ENST00000531406 XRRA1Q6P2D8 792 aa14.77□□□□□ -0.05
TM9SF1-211ENST00000531406 CASC1Q6TDU7 716 aa14.77□□□□□ -0.05
TM9SF1-211ENST00000531406 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.77□□□□□ -0.05
TM9SF1-211ENST00000531406 SMARCC2Q8TAQ2 1214 aa14.77□□□□□ -0.05
TM9SF1-211ENST00000531406 CUL5Q93034 780 aa14.77□□□□□ -0.05
TM9SF1-211ENST00000531406 NECAB3Q96P71 396 aaPredicted RBP14.77□□□□□ -0.05
TM9SF1-211ENST00000531406 TGS1Q96RS0 853 aaKnown RBP14.77□□□□□ -0.05
TM9SF1-211ENST00000531406 MTA3Q9BTC8 594 aa14.77□□□□□ -0.05
TM9SF1-211ENST00000531406 BDP1A6H8Y1 2624 aa14.77□□□□□ -0.05
TM9SF1-211ENST00000531406 MEIS2O14770 477 aa14.76□□□□□ -0.05
TM9SF1-211ENST00000531406 PLEKHA8P1O95397 391 aa14.76□□□□□ -0.05
TM9SF1-211ENST00000531406 AMHP03971 560 aa14.76□□□□□ -0.05
TM9SF1-211ENST00000531406 GNAQP50148 359 aa14.76□□□□□ -0.05
TM9SF1-211ENST00000531406 MKRN4PQ13434 485 aaPredicted RBP14.76□□□□□ -0.05
TM9SF1-211ENST00000531406 PLEKHG4Q58EX7 1191 aa14.76□□□□□ -0.05
TM9SF1-211ENST00000531406 PCNX4Q63HM2 1172 aa14.76□□□□□ -0.05
TM9SF1-211ENST00000531406 TMTC2Q8N394 836 aa14.76□□□□□ -0.05
TM9SF1-211ENST00000531406 SRBD1Q8N5C6 995 aaKnown RBP14.76□□□□□ -0.05
TM9SF1-211ENST00000531406 GDPD5Q8WTR4 605 aa14.76□□□□□ -0.05
TM9SF1-211ENST00000531406 HLA-CQ95604 372 aa14.76□□□□□ -0.05
TM9SF1-211ENST00000531406 SENP7Q9BQF6 1050 aa14.76□□□□□ -0.05
TM9SF1-211ENST00000531406 LSG1Q9H089 658 aaKnown RBP14.76□□□□□ -0.05
TM9SF1-211ENST00000531406 SUGCTQ9HAC7 445 aa14.76□□□□□ -0.05
TM9SF1-211ENST00000531406 SETD4Q9NVD3 440 aa14.76□□□□□ -0.05
TM9SF1-211ENST00000531406 LMCD1Q9NZU5 365 aa14.76□□□□□ -0.05
TM9SF1-211ENST00000531406 SEC63Q9UGP8 760 aaKnown RBP14.76□□□□□ -0.05
TM9SF1-211ENST00000531406 MTUS1Q9ULD2 1270 aa14.76□□□□□ -0.05
TM9SF1-211ENST00000531406 TELO2Q9Y4R8 837 aa14.76□□□□□ -0.05
TM9SF1-211ENST00000531406 KIAA1217Q5T5P2 1943 aa14.76□□□□□ -0.05
TM9SF1-211ENST00000531406 MUC3AQ02505 3323 aa14.75□□□□□ -0.05
TM9SF1-211ENST00000531406 SH2B2O14492 632 aaPredicted RBP14.75□□□□□ -0.05
TM9SF1-211ENST00000531406 CAND2O75155 1236 aa14.75□□□□□ -0.05
TM9SF1-211ENST00000531406 GNAT1P11488 350 aa14.75□□□□□ -0.05
TM9SF1-211ENST00000531406 MCM5P33992 734 aa14.75□□□□□ -0.05
TM9SF1-211ENST00000531406 COL9A3Q14050 684 aaPredicted RBP14.75□□□□□ -0.05
TM9SF1-211ENST00000531406 UTP14CQ5TAP6 766 aaKnown RBP14.75□□□□□ -0.05
TM9SF1-211ENST00000531406 NFXL1Q6ZNB6 911 aa14.75□□□□□ -0.05
TM9SF1-211ENST00000531406 NLRX1Q86UT6 975 aa14.75□□□□□ -0.05
TM9SF1-211ENST00000531406 TRIM50Q86XT4 487 aa14.75□□□□□ -0.05
TM9SF1-211ENST00000531406 TMEM87BQ96K49 555 aa14.75□□□□□ -0.05
TM9SF1-211ENST00000531406 ZNF215Q9UL58 517 aaPredicted RBP14.75□□□□□ -0.05
TM9SF1-211ENST00000531406 INSL6Q9Y581 213 aa14.75□□□□□ -0.05
TM9SF1-211ENST00000531406 TET1Q8NFU7 2136 aa14.74□□□□□ -0.05
TM9SF1-211ENST00000531406 XIRP2A4UGR9 3374 aa14.74□□□□□ -0.05
TM9SF1-211ENST00000531406 CCDC69A6NI79 296 aa14.74□□□□□ -0.05
TM9SF1-211ENST00000531406 SLC27A2O14975 620 aa14.74□□□□□ -0.05
TM9SF1-211ENST00000531406 HTRA4P83105 476 aaPredicted RBP14.74□□□□□ -0.05
TM9SF1-211ENST00000531406 SP4Q02446 784 aa14.74□□□□□ -0.05
TM9SF1-211ENST00000531406 CENPQQ7L2Z9 268 aaPredicted RBP14.74□□□□□ -0.05
TM9SF1-211ENST00000531406 MYOCDQ8IZQ8 938 aa14.74□□□□□ -0.05
TM9SF1-211ENST00000531406 CMTR1Q8N1G2 835 aaKnown RBP14.74□□□□□ -0.05
TM9SF1-211ENST00000531406 SEPT8Q92599 483 aa14.74□□□□□ -0.05
TM9SF1-211ENST00000531406 ESYT1Q9BSJ8 1104 aa14.74□□□□□ -0.05
TM9SF1-211ENST00000531406 OSBPL7Q9BZF2 842 aa14.74□□□□□ -0.05
TM9SF1-211ENST00000531406 PSTPIP2Q9H939 334 aa14.74□□□□□ -0.05
TM9SF1-211ENST00000531406 REV3LO60673 3130 aa14.74□□□□□ -0.05
TM9SF1-211ENST00000531406 CTSHP09668 335 aa14.73□□□□□ -0.05
TM9SF1-211ENST00000531406 RXRAP19793 462 aa14.73□□□□□ -0.05
TM9SF1-211ENST00000531406 COL9A1P20849 921 aa14.73□□□□□ -0.05
TM9SF1-211ENST00000531406 LIFRP42702 1097 aa14.73□□□□□ -0.05
TM9SF1-211ENST00000531406 ADAM17P78536 824 aa14.73□□□□□ -0.05
TM9SF1-211ENST00000531406 ARHGAP4P98171 946 aa14.73□□□□□ -0.05
TM9SF1-211ENST00000531406 FAM26DQ5JW98 314 aa14.73□□□□□ -0.05
TM9SF1-211ENST00000531406 GIMAP8Q8ND71 665 aaPredicted RBP14.73□□□□□ -0.05
TM9SF1-211ENST00000531406 SP7Q8TDD2 431 aaPredicted RBP14.73□□□□□ -0.05
TM9SF1-211ENST00000531406 LMBR1Q8WVP7 490 aa14.73□□□□□ -0.05
TM9SF1-211ENST00000531406 C17orf80Q9BSJ5 609 aa14.73□□□□□ -0.05
TM9SF1-211ENST00000531406 hCG_1642624A0A1W2PR95 340 aa14.72□□□□□ -0.05
TM9SF1-211ENST00000531406 ATP9AO75110 1047 aa14.72□□□□□ -0.05
TM9SF1-211ENST00000531406 CALM1P0DP23 149 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms