RNA–Protein interactions for RNA: ENST00000531257.1

FOXRED1-211, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 3

Gene FOXRED1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-211ENST00000531257 LRRC2Q9BYS8 371 aa13.16□□□□□ -0.3
FOXRED1-211ENST00000531257 LSG1Q9H089 658 aaKnown RBP13.16□□□□□ -0.3
FOXRED1-211ENST00000531257 TUT1Q9H6E5 874 aaKnown RBP13.16□□□□□ -0.3
FOXRED1-211ENST00000531257 ANO2Q9NQ90 1003 aa13.16□□□□□ -0.3
FOXRED1-211ENST00000531257 CUL9Q8IWT3 2517 aa13.16□□□□□ -0.3
FOXRED1-211ENST00000531257 FRMPD4Q14CM0 1322 aa13.15□□□□□ -0.3
FOXRED1-211ENST00000531257 LOXHD1Q8IVV2 1947 aa13.15□□□□□ -0.3
FOXRED1-211ENST00000531257 LCHNA4D1U4 455 aa13.15□□□□□ -0.3
FOXRED1-211ENST00000531257 EPOPA6NHQ4 379 aa13.15□□□□□ -0.3
FOXRED1-211ENST00000531257 SH2B2O14492 632 aaPredicted RBP13.15□□□□□ -0.3
FOXRED1-211ENST00000531257 SLC27A2O14975 620 aa13.15□□□□□ -0.3
FOXRED1-211ENST00000531257 FIBPO43427 364 aa13.15□□□□□ -0.3
FOXRED1-211ENST00000531257 CXCL10P02778 98 aa13.15□□□□□ -0.3
FOXRED1-211ENST00000531257 GNAQP50148 359 aa13.15□□□□□ -0.3
FOXRED1-211ENST00000531257 IKBKEQ14164 716 aa13.15□□□□□ -0.3
FOXRED1-211ENST00000531257 TCTN1Q2MV58 587 aa13.15□□□□□ -0.3
FOXRED1-211ENST00000531257 TRIM71Q2Q1W2 868 aaKnown RBP13.15□□□□□ -0.3
FOXRED1-211ENST00000531257 UTP14CQ5TAP6 766 aaKnown RBP13.15□□□□□ -0.3
FOXRED1-211ENST00000531257 KRT40Q6A162 431 aa13.15□□□□□ -0.3
FOXRED1-211ENST00000531257 TMTC2Q8N394 836 aa13.15□□□□□ -0.3
FOXRED1-211ENST00000531257 SRBD1Q8N5C6 995 aaKnown RBP13.15□□□□□ -0.3
FOXRED1-211ENST00000531257 LZTS2Q9BRK4 669 aa13.15□□□□□ -0.3
FOXRED1-211ENST00000531257 ESYT1Q9BSJ8 1104 aa13.15□□□□□ -0.3
FOXRED1-211ENST00000531257 ABHD14A-ACY1A0A1B0GW23 586 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 hCG_1642624A0A1W2PR95 340 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 RSPH10B2B2RC85 870 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 SPATA31C2B4DYI2 1134 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 TNFRSF10AO00220 468 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 TREHO43280 583 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 LGR5O75473 907 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 RSPH10BP0C881 870 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 SMIM10L2AP0DMW4 78 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 SMIM10L2BP0DMW5 78 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 CALM1P0DP23 149 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 CALM2P0DP24 149 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 CALM3P0DP25 149 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 SMARCA1P28370 1054 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 ICAM3P32942 547 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 SEMA3FQ13275 785 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 COL9A3Q14050 684 aaPredicted RBP13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 PCNX4Q63HM2 1172 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 CREB3L3Q68CJ9 461 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 TRAF7Q6Q0C0 670 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 METTL7BQ6UX53 244 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 SPRED2Q7Z698 418 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 NLRX1Q86UT6 975 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 SERINC5Q86VE9 423 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 TRIM50Q86XT4 487 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 INPP4AQ96PE3 977 aaPredicted RBP13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 GPR20Q99678 358 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 MTA3Q9BTC8 594 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 USP26Q9BXU7 913 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 MTUS1Q9ULD2 1270 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 SLC12A7Q9Y666 1083 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 MTCH2Q9Y6C9 303 aa13.14□□□□□ -0.31
FOXRED1-211ENST00000531257 EMSYQ7Z589 1322 aa13.13□□□□□ -0.31
FOXRED1-211ENST00000531257 PIK3CDO00329 1044 aa13.13□□□□□ -0.31
FOXRED1-211ENST00000531257 MEIS2O14770 477 aa13.13□□□□□ -0.31
FOXRED1-211ENST00000531257 EFCAB14O75071 495 aa13.13□□□□□ -0.31
FOXRED1-211ENST00000531257 CTSHP09668 335 aa13.13□□□□□ -0.31
FOXRED1-211ENST00000531257 TFF2Q03403 129 aa13.13□□□□□ -0.31
FOXRED1-211ENST00000531257 MBTPS1Q14703 1052 aa13.13□□□□□ -0.31
FOXRED1-211ENST00000531257 UBE2SQ16763 222 aa13.13□□□□□ -0.31
FOXRED1-211ENST00000531257 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.13□□□□□ -0.31
FOXRED1-211ENST00000531257 SKAP1Q86WV1 359 aa13.13□□□□□ -0.31
FOXRED1-211ENST00000531257 MICU3Q86XE3 530 aa13.13□□□□□ -0.31
FOXRED1-211ENST00000531257 ADAMTS19Q8TE59 1207 aa13.13□□□□□ -0.31
FOXRED1-211ENST00000531257 RNPEPQ9H4A4 650 aa13.13□□□□□ -0.31
FOXRED1-211ENST00000531257 PSTPIP2Q9H939 334 aa13.13□□□□□ -0.31
FOXRED1-211ENST00000531257 ZNF215Q9UL58 517 aaPredicted RBP13.13□□□□□ -0.31
FOXRED1-211ENST00000531257 TELO2Q9Y4R8 837 aa13.13□□□□□ -0.31
FOXRED1-211ENST00000531257 PRRC2BQ5JSZ5 2229 aaKnown RBP13.13□□□□□ -0.31
FOXRED1-211ENST00000531257 MUC3AQ02505 3323 aa13.13□□□□□ -0.31
FOXRED1-211ENST00000531257 RALGAPA2Q2PPJ7 1873 aa13.12□□□□□ -0.31
FOXRED1-211ENST00000531257 GJB5O95377 273 aa13.12□□□□□ -0.31
FOXRED1-211ENST00000531257 GNAT1P11488 350 aa13.12□□□□□ -0.31
FOXRED1-211ENST00000531257 LIFRP42702 1097 aa13.12□□□□□ -0.31
FOXRED1-211ENST00000531257 ARHGAP4P98171 946 aa13.12□□□□□ -0.31
FOXRED1-211ENST00000531257 GRB10Q13322 594 aa13.12□□□□□ -0.31
FOXRED1-211ENST00000531257 NECTIN1Q15223 517 aa13.12□□□□□ -0.31
FOXRED1-211ENST00000531257 SYNE3Q6ZMZ3 975 aa13.12□□□□□ -0.31
FOXRED1-211ENST00000531257 HEATR3Q7Z4Q2 680 aa13.12□□□□□ -0.31
FOXRED1-211ENST00000531257 MYOCDQ8IZQ8 938 aa13.12□□□□□ -0.31
FOXRED1-211ENST00000531257 DBF4BQ8NFT6 615 aa13.12□□□□□ -0.31
FOXRED1-211ENST00000531257 GDPD5Q8WTR4 605 aa13.12□□□□□ -0.31
FOXRED1-211ENST00000531257 UHRF1Q96T88 793 aaPredicted RBP13.12□□□□□ -0.31
FOXRED1-211ENST00000531257 RAD9AQ99638 391 aa13.12□□□□□ -0.31
FOXRED1-211ENST00000531257 SETD4Q9NVD3 440 aa13.12□□□□□ -0.31
FOXRED1-211ENST00000531257 PKD2L1Q9P0L9 805 aa13.12□□□□□ -0.31
FOXRED1-211ENST00000531257 SPDYE3A6NKU9 549 aa13.11□□□□□ -0.31
FOXRED1-211ENST00000531257 AMHP03971 560 aa13.11□□□□□ -0.31
FOXRED1-211ENST00000531257 TCF7P36402 384 aaPredicted RBP13.11□□□□□ -0.31
FOXRED1-211ENST00000531257 RNF20Q5VTR2 975 aa13.11□□□□□ -0.31
FOXRED1-211ENST00000531257 XRRA1Q6P2D8 792 aa13.11□□□□□ -0.31
FOXRED1-211ENST00000531257 FANCBQ8NB91 859 aa13.11□□□□□ -0.31
FOXRED1-211ENST00000531257 GIMAP8Q8ND71 665 aaPredicted RBP13.11□□□□□ -0.31
FOXRED1-211ENST00000531257 SENP7Q9BQF6 1050 aa13.11□□□□□ -0.31
FOXRED1-211ENST00000531257 ATP9AO75110 1047 aa13.1□□□□□ -0.31
FOXRED1-211ENST00000531257 POU3F3P20264 500 aaPredicted RBP13.1□□□□□ -0.31
FOXRED1-211ENST00000531257 MARK3P27448 753 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms