RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 TICAM2Q86XR7 235 aa10.72□□□□□ -0.69
CHMP4A-205ENST00000531158 DHX37Q8IY37 1157 aaKnown RBP10.72□□□□□ -0.69
CHMP4A-205ENST00000531158 NEK9Q8TD19 979 aa10.72□□□□□ -0.69
CHMP4A-205ENST00000531158 MTMR8Q96EF0 704 aa10.72□□□□□ -0.69
CHMP4A-205ENST00000531158 LNPKQ9C0E8 428 aa10.72□□□□□ -0.69
CHMP4A-205ENST00000531158 RNF41Q9H4P4 317 aaPredicted RBP10.72□□□□□ -0.69
CHMP4A-205ENST00000531158 KAT14Q9H8E8 782 aa10.72□□□□□ -0.69
CHMP4A-205ENST00000531158 VAT1LQ9HCJ6 419 aa10.72□□□□□ -0.69
CHMP4A-205ENST00000531158 KMT2EQ8IZD2 1858 aa10.72□□□□□ -0.69
CHMP4A-205ENST00000531158 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.71□□□□□ -0.69
CHMP4A-205ENST00000531158 TRIM6-TRIM34B2RNG4 842 aa10.71□□□□□ -0.69
CHMP4A-205ENST00000531158 H3BQ06 376 aaPredicted RBP10.71□□□□□ -0.69
CHMP4A-205ENST00000531158 ZNF213O14771 459 aa10.71□□□□□ -0.69
CHMP4A-205ENST00000531158 PPFIA4O75335 1185 aa10.71□□□□□ -0.69
CHMP4A-205ENST00000531158 GGPS1O95749 300 aa10.71□□□□□ -0.69
CHMP4A-205ENST00000531158 COL19A1Q14993 1142 aa10.71□□□□□ -0.69
CHMP4A-205ENST00000531158 SEC23AQ15436 765 aa10.71□□□□□ -0.69
CHMP4A-205ENST00000531158 WDR81Q562E7 1941 aa10.71□□□□□ -0.69
CHMP4A-205ENST00000531158 CELF3Q5SZQ8 465 aaKnown RBP10.71□□□□□ -0.69
CHMP4A-205ENST00000531158 STOX1Q6ZVD7 989 aa10.71□□□□□ -0.69
CHMP4A-205ENST00000531158 VSIG10LQ86VR7 867 aa10.71□□□□□ -0.69
CHMP4A-205ENST00000531158 MCF2L2Q86YR7 1114 aa10.71□□□□□ -0.69
CHMP4A-205ENST00000531158 FBXO22Q8NEZ5 403 aa10.71□□□□□ -0.69
CHMP4A-205ENST00000531158 RILPL2Q969X0 211 aa10.71□□□□□ -0.69
CHMP4A-205ENST00000531158 SPATA33Q96N06 139 aa10.71□□□□□ -0.69
CHMP4A-205ENST00000531158 KATNAL1Q9BW62 490 aa10.71□□□□□ -0.69
CHMP4A-205ENST00000531158 MAD2L2Q9UI95 211 aa10.71□□□□□ -0.69
CHMP4A-205ENST00000531158 MRPL11Q9Y3B7 192 aaKnown RBP10.71□□□□□ -0.69
CHMP4A-205ENST00000531158 GRXCR2A6NFK2 248 aa10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 RSPH10B2B2RC85 870 aa10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 TREHO43280 583 aa10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 PARP1P09874 1014 aaKnown RBP10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 RSPH10BP0C881 870 aa10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 MYCLP12524 364 aaPredicted RBP10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 THPOP40225 353 aa10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 SEMA3FQ13275 785 aa10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 EPC2Q52LR7 807 aa10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 IER5LQ5T953 404 aa10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 PTCRAQ6ISU1 281 aaPredicted RBP10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 CWC27Q6UX04 472 aaKnown RBP10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 CYB5R4Q7L1T6 521 aa10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 PLEKHM2Q8IWE5 1019 aa10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 MYOCDQ8IZQ8 938 aa10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 MRPL38Q96DV4 380 aaKnown RBP10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 AMNQ9BXJ7 453 aa10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 SENP2Q9HC62 589 aa10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 FAM86C1Q9NVL1 165 aa10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 INSL6Q9Y581 213 aa10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 FNDC1Q4ZHG4 1894 aaPredicted RBP10.7□□□□□ -0.7
CHMP4A-205ENST00000531158 FRMPD4Q14CM0 1322 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 EMSYQ7Z589 1322 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 PALM3A6NDB9 673 aaPredicted RBP10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 KLRF2D3W0D1 207 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 H3BNC9 293 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 ZBTB5O15062 677 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 CYTH3O43739 400 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 DHX16O60231 1041 aaKnown RBP10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 EFCAB14O75071 495 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 AMHP03971 560 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 LGALS2P05162 132 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 CTSHP09668 335 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 SMIM10L2AP0DMW4 78 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 SMIM10L2BP0DMW5 78 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 LTBRP36941 435 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 ANP32AP39687 249 aaKnown RBP10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 MRPS9P82933 396 aaKnown RBP10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 IQCA1Q86XH1 822 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 TRIM50Q86XT4 487 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 SMC5Q8IY18 1101 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 TOP1MTQ969P6 601 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 RNPEPQ9H4A4 650 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 PCDHA1Q9Y5I3 950 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 TAF6LQ9Y6J9 622 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 MYO15AQ9UKN7 3530 aa10.69□□□□□ -0.7
CHMP4A-205ENST00000531158 ZFHX2Q9C0A1 2572 aaPredicted RBP10.68□□□□□ -0.7
CHMP4A-205ENST00000531158 C17orf102A2RUQ5 167 aa10.68□□□□□ -0.7
CHMP4A-205ENST00000531158 H3BRB1 525 aa10.68□□□□□ -0.7
CHMP4A-205ENST00000531158 ADAM17P78536 824 aa10.68□□□□□ -0.7
CHMP4A-205ENST00000531158 TCF15Q12870 199 aa10.68□□□□□ -0.7
CHMP4A-205ENST00000531158 TCEAL5Q5H9L2 206 aa10.68□□□□□ -0.7
CHMP4A-205ENST00000531158 CENPQQ7L2Z9 268 aaPredicted RBP10.68□□□□□ -0.7
CHMP4A-205ENST00000531158 ATP6V0A1Q93050 837 aa10.68□□□□□ -0.7
CHMP4A-205ENST00000531158 PIGSQ96S52 555 aa10.68□□□□□ -0.7
CHMP4A-205ENST00000531158 PRRX2Q99811 253 aa10.68□□□□□ -0.7
CHMP4A-205ENST00000531158 DSCC1Q9BVC3 393 aa10.68□□□□□ -0.7
CHMP4A-205ENST00000531158 OSBPL3Q9H4L5 887 aa10.68□□□□□ -0.7
CHMP4A-205ENST00000531158 TUT1Q9H6E5 874 aaKnown RBP10.68□□□□□ -0.7
CHMP4A-205ENST00000531158 RC3H2Q9HBD1 1191 aaKnown RBP10.68□□□□□ -0.7
CHMP4A-205ENST00000531158 EVPLQ92817 2033 aa10.68□□□□□ -0.7
CHMP4A-205ENST00000531158 SPTBN4Q9H254 2564 aa10.68□□□□□ -0.7
CHMP4A-205ENST00000531158 UPP2O95045 317 aa10.67□□□□□ -0.7
CHMP4A-205ENST00000531158 IGHDP01880 384 aa10.67□□□□□ -0.7
CHMP4A-205ENST00000531158 NT5C2P49902 561 aa10.67□□□□□ -0.7
CHMP4A-205ENST00000531158 ZP2Q05996 745 aa10.67□□□□□ -0.7
CHMP4A-205ENST00000531158 DLX2Q07687 328 aaPredicted RBP10.67□□□□□ -0.7
CHMP4A-205ENST00000531158 GPM6BQ13491 265 aa10.67□□□□□ -0.7
CHMP4A-205ENST00000531158 AAMPQ13685 434 aa10.67□□□□□ -0.7
CHMP4A-205ENST00000531158 CCDC178Q5BJE1 867 aa10.67□□□□□ -0.7
CHMP4A-205ENST00000531158 HOMER1Q86YM7 354 aa10.67□□□□□ -0.7
CHMP4A-205ENST00000531158 TMEM192Q8IY95 271 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms