RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 PXMP2Q9NR77 195 aa12.21□□□□□ -0.45
SRPRA-205ENST00000531104 SAMSN1Q9NSI8 373 aaKnown RBP12.21□□□□□ -0.45
SRPRA-205ENST00000531104 EXOC1Q9NV70 894 aa12.21□□□□□ -0.45
SRPRA-205ENST00000531104 INTS13Q9NVM9 706 aa12.21□□□□□ -0.45
SRPRA-205ENST00000531104 NRBP1Q9UHY1 535 aa12.21□□□□□ -0.45
SRPRA-205ENST00000531104 CTNND2Q9UQB3 1225 aa12.21□□□□□ -0.45
SRPRA-205ENST00000531104 GOLGB1Q14789 3259 aaKnown RBP12.21□□□□□ -0.45
SRPRA-205ENST00000531104 LRRC10BA6NIK2 292 aa12.2□□□□□ -0.46
SRPRA-205ENST00000531104 E9PMD0 336 aa12.2□□□□□ -0.46
SRPRA-205ENST00000531104 DHX15O43143 795 aaKnown RBP12.2□□□□□ -0.46
SRPRA-205ENST00000531104 ZNF500O60304 480 aaPredicted RBP12.2□□□□□ -0.46
SRPRA-205ENST00000531104 CYP11B2P19099 503 aa12.2□□□□□ -0.46
SRPRA-205ENST00000531104 PTGS1P23219 599 aa12.2□□□□□ -0.46
SRPRA-205ENST00000531104 STX17P56962 302 aa12.2□□□□□ -0.46
SRPRA-205ENST00000531104 UBASH3AP57075 661 aa12.2□□□□□ -0.46
SRPRA-205ENST00000531104 STK4Q13043 487 aa12.2□□□□□ -0.46
SRPRA-205ENST00000531104 BAATQ14032 418 aaPredicted RBP12.2□□□□□ -0.46
SRPRA-205ENST00000531104 EPHA7Q15375 998 aa12.2□□□□□ -0.46
SRPRA-205ENST00000531104 ARSHQ5FYA8 562 aa12.2□□□□□ -0.46
SRPRA-205ENST00000531104 KLHL10Q6JEL2 608 aa12.2□□□□□ -0.46
SRPRA-205ENST00000531104 TTI2Q6NXR4 508 aa12.2□□□□□ -0.46
SRPRA-205ENST00000531104 FOXR2Q6PJQ5 311 aa12.2□□□□□ -0.46
SRPRA-205ENST00000531104 MOB2Q70IA6 237 aa12.2□□□□□ -0.46
SRPRA-205ENST00000531104 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.2□□□□□ -0.46
SRPRA-205ENST00000531104 CCDC186Q7Z3E2 898 aa12.2□□□□□ -0.46
SRPRA-205ENST00000531104 ARMC9Q7Z3E5 817 aa12.2□□□□□ -0.46
SRPRA-205ENST00000531104 MB21D1Q8N884 522 aa12.2□□□□□ -0.46
SRPRA-205ENST00000531104 SYT2Q8N9I0 419 aaPredicted RBP12.2□□□□□ -0.46
SRPRA-205ENST00000531104 KIAA0895Q8NCT3 520 aa12.2□□□□□ -0.46
SRPRA-205ENST00000531104 CHST13Q8NET6 341 aa12.2□□□□□ -0.46
SRPRA-205ENST00000531104 ZNF577Q9BSK1 485 aa12.2□□□□□ -0.46
SRPRA-205ENST00000531104 AGO4Q9HCK5 861 aaKnown RBP12.2□□□□□ -0.46
SRPRA-205ENST00000531104 HOMER2Q9NSB8 354 aa12.2□□□□□ -0.46
SRPRA-205ENST00000531104 LIMA1Q9UHB6 759 aaKnown RBP12.2□□□□□ -0.46
SRPRA-205ENST00000531104 A0A1B0GTH6 734 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 POTEFA5A3E0 1075 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 IPO5O00410 1097 aaKnown RBP12.19□□□□□ -0.46
SRPRA-205ENST00000531104 GAS7O60861 476 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 SLITRK3O94933 977 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 EYA4O95677 639 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 POTEIP0CG38 1075 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 FCER1AP12319 257 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 CCNE1P24864 410 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 PSMC6P62333 389 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 STIM1Q13586 685 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 DHX8Q14562 1220 aaKnown RBP12.19□□□□□ -0.46
SRPRA-205ENST00000531104 NR1I3Q14994 352 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 POTEGQ6S5H5 508 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 VSIG10LQ86VR7 867 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 RIOX2Q8IUF8 465 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 VSTM4Q8IW00 320 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 DRC7Q8IY82 874 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 NEK9Q8TD19 979 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 RMDN3Q96TC7 470 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 TEKT3Q9BXF9 490 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 UNC45AQ9H3U1 944 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 ACAD9Q9H845 621 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 KCNH7Q9NS40 1196 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 CYP39A1Q9NYL5 469 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 AGTPBP1Q9UPW5 1226 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 PCDHA2Q9Y5H9 948 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 LCTP09848 1927 aa12.19□□□□□ -0.46
SRPRA-205ENST00000531104 PSMA7O14818 248 aa12.18□□□□□ -0.46
SRPRA-205ENST00000531104 CNMDO75829 334 aa12.18□□□□□ -0.46
SRPRA-205ENST00000531104 SERPINC1P01008 464 aa12.18□□□□□ -0.46
SRPRA-205ENST00000531104 EIF2AK2P19525 551 aaKnown RBP12.18□□□□□ -0.46
SRPRA-205ENST00000531104 CLCN1P35523 988 aa12.18□□□□□ -0.46
SRPRA-205ENST00000531104 GJA5P36382 358 aa12.18□□□□□ -0.46
SRPRA-205ENST00000531104 PMS1P54277 932 aaKnown RBP12.18□□□□□ -0.46
SRPRA-205ENST00000531104 COASYQ13057 564 aa12.18□□□□□ -0.46
SRPRA-205ENST00000531104 ITGB3BPQ13352 177 aaPredicted RBP12.18□□□□□ -0.46
SRPRA-205ENST00000531104 EAPPQ56P03 285 aaPredicted RBP12.18□□□□□ -0.46
SRPRA-205ENST00000531104 CENPPQ6IPU0 288 aa12.18□□□□□ -0.46
SRPRA-205ENST00000531104 NSMFQ6X4W1 530 aa12.18□□□□□ -0.46
SRPRA-205ENST00000531104 DYMQ7RTS9 669 aa12.18□□□□□ -0.46
SRPRA-205ENST00000531104 IRF2BP1Q8IU81 584 aa12.18□□□□□ -0.46
SRPRA-205ENST00000531104 GUF1Q8N442 669 aaKnown RBP12.18□□□□□ -0.46
SRPRA-205ENST00000531104 NOC3LQ8WTT2 800 aaKnown RBP12.18□□□□□ -0.46
SRPRA-205ENST00000531104 P2RX5Q93086 422 aa12.18□□□□□ -0.46
SRPRA-205ENST00000531104 OTUD5Q96G74 571 aa12.18□□□□□ -0.46
SRPRA-205ENST00000531104 DYDC2Q96IM9 177 aa12.18□□□□□ -0.46
SRPRA-205ENST00000531104 ZNF830Q96NB3 372 aaPredicted RBP12.18□□□□□ -0.46
SRPRA-205ENST00000531104 DUSP9Q99956 384 aaKnown RBP12.18□□□□□ -0.46
SRPRA-205ENST00000531104 THAP9Q9H5L6 903 aa12.18□□□□□ -0.46
SRPRA-205ENST00000531104 A1CFQ9NQ94 594 aaKnown RBP12.18□□□□□ -0.46
SRPRA-205ENST00000531104 BTBD7Q9P203 1132 aa12.18□□□□□ -0.46
SRPRA-205ENST00000531104 ADD3Q9UEY8 706 aaKnown RBP12.18□□□□□ -0.46
SRPRA-205ENST00000531104 DNM3Q9UQ16 869 aa12.18□□□□□ -0.46
SRPRA-205ENST00000531104 STAM2O75886 525 aa12.17□□□□□ -0.46
SRPRA-205ENST00000531104 NR3C2P08235 984 aa12.17□□□□□ -0.46
SRPRA-205ENST00000531104 CCND2P30279 289 aa12.17□□□□□ -0.46
SRPRA-205ENST00000531104 PBX1P40424 430 aa12.17□□□□□ -0.46
SRPRA-205ENST00000531104 GSDMDP57764 484 aa12.17□□□□□ -0.46
SRPRA-205ENST00000531104 SPAG1Q07617 926 aa12.17□□□□□ -0.46
SRPRA-205ENST00000531104 TBX2Q13207 712 aaPredicted RBP12.17□□□□□ -0.46
SRPRA-205ENST00000531104 GIT2Q14161 759 aa12.17□□□□□ -0.46
SRPRA-205ENST00000531104 ARHGEF16Q5VV41 709 aa12.17□□□□□ -0.46
SRPRA-205ENST00000531104 GPAT2Q6NUI2 795 aa12.17□□□□□ -0.46
SRPRA-205ENST00000531104 GADL1Q6ZQY3 521 aa12.17□□□□□ -0.46
SRPRA-205ENST00000531104 GPBP1Q86WP2 473 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms